SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO10998  Validated by peptides from experiments
Pre Gene Modal
BGIBMGA008521
Annotation
PREDICTED:_xaa-Pro_dipeptidase_[Amyelois_transitella]
Location in the cell
Cytoplasmic   Reliability : 1.513 Mitochondrial   Reliability : 1.23
 

Sequence

CDS
ATGCGATATGTATGCAAAGTCTCATCTGACGCACACAAACAGGTGATGTTGTACGCGAAGCCAGGTCGAATGGAATACCAATGCGAGTCTATATTTCTGGATCATTGTTACCGTGTTGGCGGGTGCCGACATGTTTCGTACACTTGCATATGCGGATCGGGGCACAACGCCGCGACACTTCACTACGGCCACGCCGGGACTCCTAACAGCAAGATTATCGTAGACGGCGACATATGTTTATTCGACATGGGCGGCAACTACGCCGGCTACGCCGCCGACATCACCTGCTCTTTCCCGGCTAACGGGAAATTTACGGAGGATCAAAAATTGATCTATGAAGCTGTGCTCTTTGCCAGAGATGCCGTTATAAGAGAAGCGAAACCCGGTGTGTTTTGGCACGAAATGCACCTGACTGCCAACCGCGCTATGCTCGCCCATCTAAAGAGGGGAGGCCTACTGCAAGGAGATATTGAAGAAATGATTCGGAACGGAGTTAATGGTATCCTACAACCTCACGGTTTAGGCCATTTGTTAGGACTGGACGTGCACGATGTGGGAGGATATCTGCCTAACTGTCCTCCGAGGATGACTGGCCCTCTGGCCAAACTACGCACAGCCAGACAACTCTTAGCTGGAATGGTACTGACTGTCGAGCCGGGCTGCTATTTTATACCAAGATTATTGGATTCGGCCCGAAACAACCCGGAGCAGTCTCGTTTCTTCAACTGGCACAGAGTAGAACGTTTCATTGGCTTCGGCGGAGTACGGATTGAAGACGATGTTCTTATAACGGACGACGGCGTTGAGAATTTGACGTTTGTTCCTCGCACCGTTCAAGAAATTGAAGAATTTATGTCCAACGGATCCAATTTTAATAAAGAACTTAAATTCAATGTTTAA
Protein
MRYVCKVSSDAHKQVMLYAKPGRMEYQCESIFLDHCYRVGGCRHVSYTCICGSGHNAATLHYGHAGTPNSKIIVDGDICLFDMGGNYAGYAADITCSFPANGKFTEDQKLIYEAVLFARDAVIREAKPGVFWHEMHLTANRAMLAHLKRGGLLQGDIEEMIRNGVNGILQPHGLGHLLGLDVHDVGGYLPNCPPRMTGPLAKLRTARQLLAGMVLTVEPGCYFIPRLLDSARNNPEQSRFFNWHRVERFIGFGGVRIEDDVLITDDGVENLTFVPRTVQEIEEFMSNGSNFNKELKFNV

Summary

Cofactor
Mn(2+)
Similarity
Belongs to the peptidase M24B family.
EMBL
BABH01002123    BABH01002124    BABH01002125    ODYU01002540    SOQ40166.1    KQ459604    + More
KPI92504.1    NWSH01000474    PCG76152.1    PCG76151.1    AGBW02008690    OWR52762.1    AAZX01007948    AAZX01013092    AAZX01017756    AJWK01006525    AJWK01006526    AJWK01006527    AJWK01006528    AJWK01006529    KK107453    EZA50679.1    GL447257    EFN86663.1    GL888932    EGI57233.1    NNAY01001319    OXU24377.1    ADTU01011261    ADTU01011262    ADTU01011263    ADTU01011264    KQ978274    KYM95721.1    KQ982981    KYQ48564.1    GL438502    EFN68880.1    GFDF01005341    JAV08743.1    GFDF01005340    JAV08744.1    GBYB01009271    JAG79038.1    KQ980581    KYN15314.1    GBYB01009269    GBYB01009270    JAG79036.1    JAG79037.1    KQ981673    KYN38320.1    KQ459765    KPJ20019.1    KQ976500    KYM83226.1    GANO01002212    JAB57659.1    GGFL01004528    MBW68706.1    GGFL01004529    MBW68707.1    GGFL01004554    MBW68732.1    LBMM01001351    KMQ96463.1    GFDL01008165    JAV26880.1    GFDL01007898    JAV27147.1    GGFJ01005068    MBW54209.1    GAPW01001185    JAC12413.1    AXCN02001908    CH477540    EAT39285.1    KZ288311    PBC28534.1    GGFJ01005067    MBW54208.1    GAPW01001184    JAC12414.1    GAMD01002330    JAA99260.1    CH964272    EDW84979.1    GGFK01005754    MBW39075.1    GGFK01005799    MBW39120.1    AAAB01008968    EAA13255.4    EDO63501.1    APCN01005314    APCN01005315    GDAI01000450    JAI17153.1    DS232436    EDS41724.1    CP012526    ALC46571.1    AE014297    AY061085    AAF54806.2    AAL28633.1    AHN57305.1    AXCM01002051    AXCM01002052    AXCM01002053    CH480815    EDW42457.1    OUUW01000005    SPP80489.1    CH954181    EDV49371.1    CH940650    EDW67984.1    CH902617    EDV42374.1    UFQS01000229    UFQT01000229    SSX01707.1    SSX22087.1    CH916374    EDV91477.1    CM000070    EAL27168.2    CH479198    EDW28076.1    CM000160    EDW97097.1    CH933806    EDW15427.1    JRES01001597    KNC21618.1    IAAA01001096    IAAA01001098    LAA01035.1    NEVH01003500    PNF40651.1    DS235307    EEB14567.1    DS232356    EDS40568.1    UFQT01001037    SSX28599.1    JXJN01020416    GAMC01008509    JAB98046.1    KQ434775    KZC04075.1    ATLV01018935    ATLV01018936    KE525256    KFB43452.1    GFDG01003669    JAV15130.1    GDHF01032290    JAI20024.1    GFDG01001246    JAV17553.1    BT126921    AEE61883.1    CCAG010006706    GBXI01016618    JAC97673.1    EZ422344    ADD18620.1   
Pfam
PF05195   AMP_N        + More
PF00557   Peptidase_M24
PF06743   FAST_1
PF08373   RAP
PF08368   FAST_2
Interpro
IPR001131   Peptidase_M24B_aminopep-P_CS        + More
IPR029149   Creatin/AminoP/Spt16_NTD       
IPR007865   Aminopep_P_N       
IPR036005   Creatinase/aminopeptidase-like       
IPR000994   Pept_M24       
IPR013584   RAP       
IPR010622   FAST_Leu-rich       
IPR013579   FAST_2       
SUPFAM
SSF55920   SSF55920        + More
SSF53092   SSF53092       
Gene 3D
PDB
2OKN     E-value=1.37405e-82,     Score=779

Ontologies

Topology

Length:
299
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.13506
Exp number, first 60 AAs:
0.01068
Total prob of N-in:
0.10598
outside
1  -  299
 
 

Population Genetic Test Statistics

Pi
297.248869
Theta
167.191148
Tajima's D
2.804683
CLR
0.153694
CSRT
0.968851557422129
Interpretation
Uncertain
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