SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO10995  Validated by peptides from experiments
Pre Gene Modal
BGIBMGA008519
Annotation
putative_Ofd1_protein_[Operophtera_brumata]
Location
Bomo_Chr18(+):9145583-9149992      View in EpiBrowser
Location in the cell
Nuclear   Reliability : 4.153
 

Sequence

CDS
ATGGGAATCGCATTCAGTAGTACTCAATCGGGAAGACGCGACGCTGTAAGTGTTACCAGTGAAAGTGAAACAATAAGTGACGCTAAACTCTTGAGAACGATGGAGGACAAAGAAACTGAGTTGGATGAAGAAGAGATCGAGGATGATGTCCGAGTAAAAGCTAGAGAAGATGAAATGAATGAATTCAAAAAACAGTTGAATATAAAAAGAGAGCAAAGAAAAGAAATATTATCACGACATAGAACTGAAAAAGAAAATTTAGAAAAATCTTTGCATGACGAAAGGGTGTATACAATTGAATTGTGTGAATGCAATAAGCAGTTGCGTGAACTACTTATTAGGAACAATATCGAGATACCTGAAAATCTTCGCCAACCCGATGATACTCACGACATCAGCCTCGCGGTTGTGCAACTAAAAGATGAATTCGAAAAATTGAAATCATTAAATAATAAACTGAGGCAAGACTTAGCAGATTCGAACAAGTCTCTTCAGGATGCCAATTCTGATATAGCAGATCTCCATGCACAAAACAGAGAATCGATGAAGCAAATAAGTGCGTTAAAAGAAGTGGTGACAGCCAGTAAAACAATGATTAATCTCCGCGAAGATCAGCTTAATGGACTGAAAAACAAATTACAAGAAATAGAAAAGACTCTAGCTGACAGAGAAACGAACCTACTATCTGCTGATCTTAGACAAGAATATGAGAAACAATTACAAAACATACGCACCTTACGCGGACTTTACGAAGAGAGGGCGAGGTTAGCTGAGCTTAAGCGACTGGGACTGGTACGAGATTTGGAAGAACAAAAACGGTTACACCAAACAGAAATGGACAAATCTAAGGAATTAAAACTAAGAATAGACGAACTAGAAACAAAAGTGGACACATTACATGATATTATTGAAAATAAAAATAACCAGATATCGTCATGCCAGGACGAGATGAATGAAATGAAAGCTGAAATGGCTGTTATACATAAGCTTTTCTCACAAGTTTTATTAGGCTATAAATCCAAACAAGACTTAGACAAATTAGTTCATAGGCTTGAAGAAAATCATGGGCTACTGACCCACATGGCTGAAAAAGAAAATGGATCAGAATTATCTACAGCTTTACCTAAGCTTTTGTTAGAACTTGTTAGTCAAGTTGAGGATAACGAGGAAACTAATAATAATGAAGAAAATCTTGATGATGAATGCAAAAGTTCTCAAGAAAATCACCATGTTACTGAAGAAGCAGAAAGCCATATTGGTCAAAACACAACAGCTGAAGAAATCGTAGAAAATCTACCCAAAGTCTGGAAAGTCTTAATGGAACTTTTAAGTCATCAAACTATTGCTGAGCCTAATATTTCGGAAAAAGTGACCACATGCTATAAGTCGGTTGAAACAAAATCAGGACCTGTACTAGTGCCAAGCGTTAGTCAGACTTACATCAGATTAAAGGATCTTATAATAGAAAAATTGGGTTTAGTTAAAGAAGTAAATCGAATGAAGCAATTAAACTCACATTTGGAGACTCGGTTGCAAGAACAAGAGAAAAGACTTTGTCTTGTTACAACTGAACTAAGTAAAACGTGGCACGTAGTAAGCAGATTGCGTAAACATCATCACCAATTACATACTCATGAAAAAATACTCAAATACGAGTTACAACAGAAACGAAAATTGTTAAATGAACTGAAAGAAGAATTGGAGTACTGCCGCGAGAAATGGGAACAAGCTCGTGAAAAAAATACTCAGTCTGAGAGAGATTGGAAAAAGCTGCGGGCTGAATTTTCTAGCCGGAAAACAAAAACAAACTCTCTTTCACTGAACAACTCTGCTGAGAGTGGTTATAGTGATGAACGACCTTCTGATGAGTCGTCTGAATCGAATGATGAAAGCGAATATGTGACCGAACCTCTAGTGCGATGTAAGAAAAAAATGAAGAAATCATTTGAAAATATATTAGATTCTAGTACAGATTTTAATCTAGCAGCAGAAAGAGAAGATCCAGTTAGTGATATGATCGATGTGGCTGATCTACCACTAGACAACCATGATGTTGATAATGATCAAGAAGATGTTTCTGAAATTAGTAAAAGTGAAATGGTGCTGAAAAGTGACAAAACATGCGATGAAACTGAAGACGAATTATGTGACATTGCCCATGATGACTCACCTATTGAAGAAACAGCAATTGAACCAGGCTGCAGTGAAGAAAGAGATAAAGCTAATACAACGATAATTTCTATTGATCCAGCAGAAATTTTAAGAAACATTAGAAACCAAAACGAAAGACTCGCTCGAAAAGATGAAAAATTGGAACAGTTAGAAAAATCTAGCATTTCTTTATTAAAAAAGACCCAAGCTACAATAAAACTAGGCGATGAAATAAATAGCACATTGGACCACCTTCTTAATCGACCAACGTCTAGCGGAAGCCCGATCGGTCATAGTTCAATTGAAAAATCTCTTCCGATATCTATCGAATTAGATAACGAAATCTCAAAGGAAGAATATGGTTCGGATTGTTCAACTTTAGAGAGTAAGCGATTCGTTACATCCGAAAGTCTAGTTAGGAATGATGATGATTATAGTGCTGTTGATAATTTGCAGGCCAGTGATAGTATTCAATCCGAAACTGATTTGAAAACTATTTTAGAAAATGTTACAAAACAAAATGAAAGATTGTCAAAAAAAAACGAACGTCTAAAACAACTCGAATCGGGATGCGCTAAAGTTATAGAAGACTTGTCTAATACTATGACGGTTGGTGAAAATATCAGTAAAAATTTAGATTCTCTTCTTATAGAACACAAAGGTCAAGATGAAACCGCTGAAGACGAAGCAAAAGATACTACCGATTGTCAAATATCTGAGCCTTCCACATCAACTGAAATTGATCATGAAGCTCGTTTTGCTGCCCGTGATCTCCGTTTAAAGAGATTAGAAGAACAAACGAAATCTCTTGTAACTAAAGTCAACAAGACAACGTCAAAAGGTGTTAAAATACATTATAAATTGCAAGAGTTACATAACATTTACGGGTCTGATAATTCCAGAGCCGGTACACCTTCAGAAGAAAATGACGACAAAAGTACTGAAGACGACGCTAGTATTGAAACAGAATGA
Protein
MGIAFSSTQSGRRDAVSVTSESETISDAKLLRTMEDKETELDEEEIEDDVRVKAREDEMNEFKKQLNIKREQRKEILSRHRTEKENLEKSLHDERVYTIELCECNKQLRELLIRNNIEIPENLRQPDDTHDISLAVVQLKDEFEKLKSLNNKLRQDLADSNKSLQDANSDIADLHAQNRESMKQISALKEVVTASKTMINLREDQLNGLKNKLQEIEKTLADRETNLLSADLRQEYEKQLQNIRTLRGLYEERARLAELKRLGLVRDLEEQKRLHQTEMDKSKELKLRIDELETKVDTLHDIIENKNNQISSCQDEMNEMKAEMAVIHKLFSQVLLGYKSKQDLDKLVHRLEENHGLLTHMAEKENGSELSTALPKLLLELVSQVEDNEETNNNEENLDDECKSSQENHHVTEEAESHIGQNTTAEEIVENLPKVWKVLMELLSHQTIAEPNISEKVTTCYKSVETKSGPVLVPSVSQTYIRLKDLIIEKLGLVKEVNRMKQLNSHLETRLQEQEKRLCLVTTELSKTWHVVSRLRKHHHQLHTHEKILKYELQQKRKLLNELKEELEYCREKWEQAREKNTQSERDWKKLRAEFSSRKTKTNSLSLNNSAESGYSDERPSDESSESNDESEYVTEPLVRCKKKMKKSFENILDSSTDFNLAAEREDPVSDMIDVADLPLDNHDVDNDQEDVSEISKSEMVLKSDKTCDETEDELCDIAHDDSPIEETAIEPGCSEERDKANTTIISIDPAEILRNIRNQNERLARKDEKLEQLEKSSISLLKKTQATIKLGDEINSTLDHLLNRPTSSGSPIGHSSIEKSLPISIELDNEISKEEYGSDCSTLESKRFVTSESLVRNDDDYSAVDNLQASDSIQSETDLKTILENVTKQNERLSKKNERLKQLESGCAKVIEDLSNTMTVGENISKNLDSLLIEHKGQDETAEDEAKDTTDCQISEPSTSTEIDHEARFAARDLRLKRLEEQTKSLVTKVNKTTSKGVKIHYKLQELHNIYGSDNSRAGTPSEENDDKSTEDDASIETE

Summary

Uniprot
H9JG72   A0A2H1WQH3   A0A2A4JWI5   A0A3S2LQW8   A0A0L7LBC8   A0A194PGT2   + More
A0A194RRB8   A0A212F8V7   A0A1E1WVL3  
Pubmed
19121390    26227816    26354079    22118469   
EMBL
BABH01002115    ODYU01010308    SOQ55325.1    NWSH01000474    PCG76146.1    RSAL01000326    + More
RVE42522.1    JTDY01001819    KOB72793.1    KQ459604    KPI92507.1    KQ459765    KPJ20022.1    AGBW02009678    OWR50153.1    GDQN01000032    JAT91022.1   
Proteomes
UP000005204    UP000218220    UP000283053    UP000037510    UP000053268    UP000053240    + More
UP000007151   
PRIDE
H9JG72   
ProteinModelPortal
H9JG72   A0A2H1WQH3   A0A2A4JWI5   A0A3S2LQW8   A0A0L7LBC8   A0A194PGT2   + More
A0A194RRB8   A0A212F8V7   A0A1E1WVL3  

Ontologies

KEGG
101741163    no KO assigned | (RefSeq) myosin heavy chain, cardiac muscle isoform
GO

Topology

Length:
1040
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0
Exp number, first 60 AAs:
0
Total prob of N-in:
0.00000
outside
1  -  1040
 
 

Population Genetic Test Statistics

Pi
251.315701
Theta
218.636295
Tajima's D
0.498814
CLR
0.119054
CSRT
0.508224588770561
Interpretation
Uncertain
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