SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO10986
Pre Gene Modal
BGIBMGA008513
Annotation
serine_protease_36_[Mamestra_configurata]
Location in the cell
Extracellular   Reliability : 1.957 PlasmaMembrane   Reliability : 2.405
 

Sequence

CDS
ATGAAGTTCATCATATTTCTCGGCTTAACAAATTTAGTCTGTGGTATAAATTTAAGTGAAACGTTTAGGAACAGCGCTTTCGGATATCATGCCAGGGTCGGAATTCCTTTAGCTGAAAGAATACAAAGAGATGAAAATAATTATTTCAATTCTAGAATTGTTGGAGGTGTACCAGCCGTCGCTGGACAATATCCTTTTAAAGCCGGACTAATTGGAGATATAATTGGATTTGATGGTGTTAGCGTGTGCGGTGGATCCCTTATCCATCCTTCAAAGGTTGCTACAGCTGCGCACTGCTGGAATGACGGTGAAAACCAAGCATGGCGTTTTACCGTCGTGCTTGGTTCTAGCTTATTGTTCAGCGGCGGAACGAGACTTGCTTCAAGCGTTGTTGTCGCTCATCCAGATTGGAACCCTAATTCGGTTCAGAATGATGTTGCTGTGATATATTTAACCTATGAAGTAGAAACATCAAGTATCATTACACCTATCGCTTTACCATCCGGTCCTGAACTGTTTGAAAATTTTAAAGGAGAAGCGGCAATTGCCATTGGATTTGGTATCACGAGTAATGATAACGGCATTTCATCTAATCAGTTCTTAAGTCATGTGCGCTTGACTGTAATTTCGAATAATATTTGCAATTTGGTGTTCCCGTTTATTTTGCAAGCATCCAACATCTGTACCAGTGGTTTTGGATTTATTGGTACTTGCGGTGGAGACTCCGGTGGTCCTCTTATTACTTACAGGAATAATGAGCCTATATTAATTGGCATTGCATCATTCGGTTCGGCCTTAGGTTGTGAAATCGGCCTCCCGTCTGCTTACTCCAGAGCAACATCATATGTGGACTTCTTCAACCAACACTTAAAACAATAA
Protein
MKFIIFLGLTNLVCGINLSETFRNSAFGYHARVGIPLAERIQRDENNYFNSRIVGGVPAVAGQYPFKAGLIGDIIGFDGVSVCGGSLIHPSKVATAAHCWNDGENQAWRFTVVLGSSLLFSGGTRLASSVVVAHPDWNPNSVQNDVAVIYLTYEVETSSIITPIALPSGPELFENFKGEAAIAIGFGITSNDNGISSNQFLSHVRLTVISNNICNLVFPFILQASNICTSGFGFIGTCGGDSGGPLITYRNNEPILIGIASFGSALGCEIGLPSAYSRATSYVDFFNQHLKQ

Summary

Similarity
Belongs to the peptidase S1 family.
EMBL
KX380994    ANS56510.1    FJ205401    ADM35105.1    FJ205400    ACR15969.2    + More
NWSH01000291    PCG77701.1    ODYU01000971    SOQ36525.1    ODYU01004792    SOQ45041.1    PCG77700.1    SOQ36526.1    KM083794    AIR09775.1    GBRD01010002    JAG55822.1    SOQ45042.1    GBRD01009676    JAG56148.1    JTDY01000073    KOB79018.1    KM083784    AIR09765.1    PCG77699.1    RSAL01000119    RVE46739.1    EF531627    ABR88238.1    JQ904133    AFM77763.1    RVE46738.1    BABH01002097    JN252035    AFM28248.1    AY953055    AAX62028.1    NWSH01000651    PCG75015.1    JQ429441    KR024676    AFW03966.1    ALE15218.1    JQ429440    AFW03965.1    AY953054    AAX62027.1    KQ459765    KPJ20040.1    AY618895    AAV33658.1    HM209421    ADI32882.1    EU325550    ACB54940.1    KQ459604    KPI92526.1    HM209419    ADI32880.1    HM209420    ADI32881.1    GU323796    ADA83701.1    HM209422    ADI32883.1    HM990175    ADT80823.1    GQ354838    ACU00133.1    BABH01002098    AY953053    AAX62026.1    AY251276    AAO75039.1    JTDY01001894    KOB72615.1    KPI92527.1    KPJ20041.1    FJ205405    ACR15973.2    JN252046    AFM28259.1    KM083788    AIR09769.1    NWSH01002619    PCG67833.1    AF233731    AF233734    AAF71518.1    AAF71716.1    JQ904134    AFM77764.1    Y12287    CAA72966.1    Y12280    CAA72959.1    HM990187    ADT80835.1    PCG77698.1    PCG77697.1    FJ205413    ACR15981.1    HM990173    ADT80821.1    FJ205412    ACR15980.1    EF531624    ABR88235.1    EF531623    ABR88234.1    PCG77696.1    PCG77693.1    PCG77694.1    Y12281    CAA72960.1    KM360186    AKH49602.1    AGBW02010111    OWR49146.1    EF531625    ABR88236.1    AY618892    AAV33655.1    KP730444    AKR06192.1    PCG77702.1    PCG77692.1    PCG67834.1    FJ205424    ACR15991.1    PCG67835.1    FJ205404    ACR15972.2    Y12279    CAA72958.1    PCG77703.1    EF531626    ABR88237.1    HM990185    ADT80833.1    ODYU01007460    SOQ50255.1    EF104914    ABP96916.1    PCG67836.1    PCG67837.1    AY618891    AAV33654.1    KT907053    AMR44225.1    GQ891130    ADK27715.1    KOB72613.1    SOQ36529.1    AF233730    AAF71517.1    KP690081    ALO61083.1    SOQ36527.1    KX380993    ANS56509.1    ODYU01001778    SOQ38451.1    AGBW02012905    OWR44234.1    HM990177    ADT80825.1    AF233732    AAF71519.1    SOQ36528.1    L34168    AAA58743.1    KX380992    ANS56508.1    JQ904138    AFM77768.1    PCG75018.1    GDQN01005957    JAT85097.1   
Pfam
PF00089   Trypsin
Interpro
IPR001254   Trypsin_dom        + More
IPR009003   Peptidase_S1_PA       
IPR001314   Peptidase_S1A       
IPR033116   TRYPSIN_SER       
IPR018114   TRYPSIN_HIS       
SUPFAM
SSF50494   SSF50494       
PDB
2HLC     E-value=1.32729e-29,     Score=322

Ontologies

Topology

SignalP
Position:   1 - 15,         Likelihood:  0.939199
 
 
Length:
292
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
5.29252
Exp number, first 60 AAs:
0.48397
Total prob of N-in:
0.06526
outside
1  -  292
 
 

Population Genetic Test Statistics

Pi
165.323936
Theta
162.230749
Tajima's D
0.183317
CLR
24.144975
CSRT
0.418329083545823
Interpretation
Uncertain

Multiple alignment of Orthologues

 
 

Gene Tree

 
 
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