Gene

KWMTBOMO10984

Annotation

PREDICTED:_piggyBac_transposable_element-derived_protein_4-like_isoform_X4_[Bombyx_mori]

Location

Bomo_Chr18(-):8868677-8872470      View in EpiBrowser

Location in the cell

Nuclear   Reliability : 1.344 PlasmaMembrane   Reliability : 1.856

CDS

ATGACGCGATCTTCATTGTCTTATAAATGTGATTGTATTTACAGATTTAACCTTATTGCAATTGAGGATTTGCCCGCTGGGGAACCGATAGAGCAGGCATTGACGGAGCGAAGTACGTTGAATGTGGCGGCAGTGGTACGAGCACGCCATCTTCTAGATATAATATACAGATTTCTGTACATGGCAGCCGTAGTCCTTCGCCGTCACATAAACGTGTGCGTCGATCGCTTTGCCCAGACCAAGAACATGATACTACGAAGTGACGACGATGACAGCGATGATGAGAGCCAGAATGATAACGACGAAATCGTTCCCATGATTATCCCCCGGGCAGCTGGAATACTGATGGACACTCCGGACGACGAGGAGATTGAGATTGACACGGCGGCGGCAACTAAACCTCTTGTGACATCTTCCGCGCCTTCCATCATTTCAGCACCTACATCACCAGCGCGTGATACCGGTATGAAGCCTAGTCATTTTTTTGAATTTGACTGGGGAACTTTCCCTGACTCTCCTATACCGCCAACAGAAAGGCGTGAATCTTTTAAGGAACACTCTGGTCCCACTGTTGCTGTAAGTGACCCTTACGAGATTTTTAGACTTATTTGGGACCAGGAGTTCATGGAATTTATTGTGCAGGAAACAAATAGATATGCCCAACAATTAGCTGCTGAAATGTTGGACGGCGGGGAATTACAGGCCTCCAGTAGGATTACAGAATGGAAAGAAACCAATGTAGACGAGTTATTGGTGTTCTTCGGAATATTACTGGCGATGGGAATCGTCATAAAGAACCGGGTTGAAGAGTACTGGAATACGGAACAAAACATCTTCTCCACTCCAGGTTTCAAAGTATATATGTCGCTTAGGAGGTTCCAGTTACTCAGCAGGTGCTTACATTTTAATAATTCCGAGAACTTGAGAAACCTCAACCTGGATCCCTCACAGGCAAAGCTTTTTAAAGTGGAGCCTGTGATTAGCCATTTGAATTCCAAGTTCACGGAATTATATATAATGAAGCAGAACATTGCTTTAGATGAATCGCTGCTGCAGTGGAAAGGTTGGTTGAACATCAACCAATTTATTCCAAACAAAGCTGCAGCAGTGGGCATAAAAACTTACGAAATATGTGAGTCGCAGACGGGGTATTTATGGCGATTTAAAATCCATGCCCATAAGGCTTCGCCTACAGTCTCAGAGGCTGATCCATTCACAGCGAGTACACCGGCGTTGGTTCTTAACCTTATCAAAGGTTTAGAACACAAAGGATACACGTTGTGGATGGATAACTTCTACAATTCCCCAGCACTTGCCCGAAAACTCAAATCGATTGGGTTTGATTGTGTCGGTACGTTGCGGACAAACCGCAAGTATGTCCCGACGGAACTGACCAATCTGAAAAAATCTCAGATGAAGCCCGGGCAAGTAGTAGGCTATACCAGTGGAGATGTCGATTGCATAATATGGAGAGATCAGAACCGCGTAGCGACGATCTCAACGTACCATGGCAATGCCGTCTCCACTAAAAACGGAGTAACAAAACTTATTTTGATACGTGACTACAACATCTGCATGGGTGGCGTGGATAAAAAAGATCAGATGTTGGCTGCATTCCCAATTGAACGCAAGAGGACACAAATTTGGTACAAGAAATTGTTTAAAAGTTATTATTAG

Protein

MTRSSLSYKCDCIYRFNLIAIEDLPAGEPIEQALTERSTLNVAAVVRARHLLDIIYRFLYMAAVVLRRHINVCVDRFAQTKNMILRSDDDDSDDESQNDNDEIVPMIIPRAAGILMDTPDDEEIEIDTAAATKPLVTSSAPSIISAPTSPARDTGMKPSHFFEFDWGTFPDSPIPPTERRESFKEHSGPTVAVSDPYEIFRLIWDQEFMEFIVQETNRYAQQLAAEMLDGGELQASSRITEWKETNVDELLVFFGILLAMGIVIKNRVEEYWNTEQNIFSTPGFKVYMSLRRFQLLSRCLHFNNSENLRNLNLDPSQAKLFKVEPVISHLNSKFTELYIMKQNIALDESLLQWKGWLNINQFIPNKAAAVGIKTYEICESQTGYLWRFKIHAHKASPTVSEADPFTASTPALVLNLIKGLEHKGYTLWMDNFYNSPALARKLKSIGFDCVGTLRTNRKYVPTELTNLKKSQMKPGQVVGYTSGDVDCIIWRDQNRVATISTYHGNAVSTKNGVTKLILIRDYNICMGGVDKKDQMLAAFPIERKRTQIWYKKLFKSYY

Uniprot

A0A194RRT0   A0A3S2TBD2   A0A3S2PA36   A0A2H1V5F3   A0A0L7L984   A0A2A4IY54   + More
A0A2W1B9N8   A0A3S2TTE3   A0A2A4ITI3   A0A2W1BNR3   A0A3S2NWG9   A0A147BD88   A0A1B6H7X0   A0A147BEZ3   A0A1B6LW93   A0A1B6KKZ3   A0A087UJ51   A0A087TJF5   A0A3Q0JNJ9   A0A2J7Q4C7   A0A1B6LFF4  

Pubmed

26354079    26227816    28756777    29652888   

EMBL

KQ459989    KPJ18766.1    RSAL01001012    RVE40990.1    RSAL01000155    RVE45659.1    + More
ODYU01000749    SOQ36006.1    JTDY01002247    KOB71806.1    NWSH01005605    PCG64100.1    KZ150197    PZC72319.1    RSAL01000003    RVE54733.1    NWSH01008683    PCG62453.1    KZ150113    PZC73303.1    RSAL01000132    RVE46376.1    GEGO01007089    JAR88315.1    GECU01037003    GECU01013756    JAS70703.1    JAS93950.1    GEGO01006047    JAR89357.1    GEBQ01012026    JAT27951.1    GEBQ01027849    JAT12128.1    KK120039    KFM77390.1    KK115494    KFM65244.1    NEVH01018384    PNF23441.1    GEBQ01017560    JAT22417.1   

Proteomes

UP000053240    UP000283053    UP000037510    UP000218220    UP000054359    UP000079169    + More
UP000235965   

Pfam

PF13843   DDE_Tnp_1_7        + More
PF13842   Tnp_zf-ribbon_2

Interpro

IPR029526   PGBD        + More
IPR018159   Spectrin/alpha-actinin       
IPR032718   PGBD4_C_Znf-ribbon       

ProteinModelPortal

A0A194RRT0   A0A3S2TBD2   A0A3S2PA36   A0A2H1V5F3   A0A0L7L984   A0A2A4IY54   + More
A0A2W1B9N8   A0A3S2TTE3   A0A2A4ITI3   A0A2W1BNR3   A0A3S2NWG9   A0A147BD88   A0A1B6H7X0   A0A147BEZ3   A0A1B6LW93   A0A1B6KKZ3   A0A087UJ51   A0A087TJF5   A0A3Q0JNJ9   A0A2J7Q4C7   A0A1B6LFF4  

KEGG

101738125    no KO assigned | (RefSeq) uncharacterized LOC101738125

GO

Length:

558

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.583069999999999

Exp number, first 60 AAs:

0.12315

Total prob of N-in:

0.03108

outside

1  -  558

 

 

Pi

62.66851

Theta

125.336671

Tajima's D

-1.26948

CLR

108.742701

CSRT

0.0965951702414879

Interpretation

Uncertain