Silkworm Genome Informatics Database

Gene

KWMTBOMO10956

Pre Gene Modal

BGIBMGA008502

Annotation

PREDICTED:_uncharacterized_protein_LOC106133664_[Amyelois_transitella]

Location

Bomo_Chr18(+):8175967-8179630 View in EpiBrowser

Location in the cell

Nuclear Reliability : 4.738

CDS

ATGGAGACGGAAAGACAGAAATTCTACAAACATAAAATCAAACGAATCAGTATTTCGAACAAGGATGATAAGTCTTCCGTAATTGATGAAAGCGACACTAGCAAATCTACAGTAACAATATTAGGAAGTACCTCTTATCATAAACAAGTCAACGATTTAAGTATTATTAATTCCAACAACATAGATCAACAACCTGAAACCTTGTTTGGTGACCGAATCGATTTAAATTATGAATCGAACTTTTATGCCAATACTGTGGATGAGGTGACAAACATGACAGATGAAAATATACCTGATGATTTGAATGACCGTGATGTAAATATTAACGAAGTAACGATTGAAGTGGAACGAGAGTATCAAGAAGAAATAGACAAACCTGAAGTAACGGAAATAGAAAGAACCATTAGTAACGACAGCCTTCAACCAACTATTACCGATATCATACCTGAAAAAGATATGGATATATTGAGAAAATCTTTAGAAGATGATAATTTGGATGACAATGTACAACTAATTCAAACAGCGGATGATAATCCAATACGGAAAAAAAACAAACGGGTTGGAGTGAAAAAAAGCTACGTTGATTTTTTAAGTGAAGATGACGATTTTGCCTGGGACTCAACGTCGTGGAGAGAAACAGACGACTCTTCAAGTGATCAAGATGATCAAGTACCAACGAAGAAAAAGAAAACAAGCATAAAAGATGGAAAAGTGGGAGATGCAGGATTAAAAAAGAAAAGAACAAATAAGAAAAAGGTACGAAAGGATGCTAGATCAAAAGGCGTTCAATATGTTAAGGCAGATGGTTCAATTGTGAAAGAAAGAAATATGAAACCGAATCCTTGCTTAAAAAAAAACTGTCCCTACAAGTGTCAAGAAATAACCTCAGAAAAAAGGAGTGCCATATTTAAACATTTTTGGGAATTATCTCCGGAAAGAAAAAAGCAGTGGATAATATCTATGTCCTCTAAGCAATCCATAAAAAGGAAGAGATCCAAAGACTCTAATTACAGGAATAGCACATTCTGTTATTTCATAAATGATGGAGAGGGTCGGCGACAAGTTTGTTTAAAGTTCCTCATGAATACTCTTGATGTCACTCAAAGATACATTTATTATACATTAACAACACAGGAACTTGGTATGGCGAAAGAAGATGGAAGAGGAAAATGCATTCCCCCCAACAAAACATCTAACGCAATCAAAGAATCAGTAAAATCTTTTATCAAAAGGTTACCTGCAATACCATCGCACTACTGCCGAAAGGATAGCACAAAACTATATCTGCCTGTTGAATTTAAAAATATAAAAAATTTATACCGCTGTTATAAAGAAGACCTCATTAGTAAAGGAGTCGATGTTGTAAGTGAAAAAGTATTCCGTCAAATATTCACTACTGATTTTAACATTGGGTTTCATGTGCCTAAGAAGGATAAATGCATAAAATGCCTACGTTTTGAAGGACAGAAGCCAGAGGATTGTGCCAAATTTCAAGATCATTTAGAGGAAAAGAAGGCATCAAAGAAGCGGTTAGAATGTCATCGACAGTTAGGTAAAGAAAATCCTTCCATTCTGTGCACATCTTTTGACCTCCAGAAAGTTCTCAATACGCCTCATGGCAATAACATGTTACTATTTTATTCTAGAAAGTATGCTGTTTATAATTTATGTTTTTATGAAAGCATCACAAGGAATGGTTTTTGTTTTATCTGGGGAGAATCTGAAGCAAAGAGGGGCGCAAATGAAATTGCTACTATTATACAGAAATACATAGAGAATGTGGATTCTCGAGGTACCATTACATCTTTGATCTTGTATTCAGATTCTTGCCCTGGACAAAACAAAAATAAAATAGTCCTTGCAACAATACATAATGCTTTGTTGCAATCGAACAATTTACAAGCAATTCAAATGAATTACCTTCTCCCTGGCCACACGGAAATGTCGGTAGACAGCATACACTCTACAATCGAACAATCCGTAAGAAATATTACTGTATGGGCCCCTTCGCAATGGGCTACAATAAGCCAGCTAGCAAGAAAAGAACCAGCACCTTATAATGTTGAAAATCTGACACACGAGGATTTCTTAAATTTTGATGATATGTCTGAAAAATATTTTAAGGGTAACCTTGTAGGTAAAATTAGTAAAATCCGTACAGCAACATTTAAAAAATCTCATCCAAATCAAATGAAAGTAAAATTTTCAATGAAAGATAATGCATCCGAAGAGATTATACAAATTATTGCGAAACCTAGAGCTATCAATCGTAGATATAATACAAGTTTGCCGATTACCAAAGCCAAATACATGGACCTAAAGAAATTGTGTGACACTGGGGTTATACCCAAGATATTTCATAAAGAATACATAAATCTACAACACTGCAATTCCAAAGATGTTCTACTGGATACTGATGTAGAAGATACAGTCGAAGAAAATGATTATTAA

Protein

METERQKFYKHKIKRISISNKDDKSSVIDESDTSKSTVTILGSTSYHKQVNDLSIINSNNIDQQPETLFGDRIDLNYESNFYANTVDEVTNMTDENIPDDLNDRDVNINEVTIEVEREYQEEIDKPEVTEIERTISNDSLQPTITDIIPEKDMDILRKSLEDDNLDDNVQLIQTADDNPIRKKNKRVGVKKSYVDFLSEDDDFAWDSTSWRETDDSSSDQDDQVPTKKKKTSIKDGKVGDAGLKKKRTNKKKVRKDARSKGVQYVKADGSIVKERNMKPNPCLKKNCPYKCQEITSEKRSAIFKHFWELSPERKKQWIISMSSKQSIKRKRSKDSNYRNSTFCYFINDGEGRRQVCLKFLMNTLDVTQRYIYYTLTTQELGMAKEDGRGKCIPPNKTSNAIKESVKSFIKRLPAIPSHYCRKDSTKLYLPVEFKNIKNLYRCYKEDLISKGVDVVSEKVFRQIFTTDFNIGFHVPKKDKCIKCLRFEGQKPEDCAKFQDHLEEKKASKKRLECHRQLGKENPSILCTSFDLQKVLNTPHGNNMLLFYSRKYAVYNLCFYESITRNGFCFIWGESEAKRGANEIATIIQKYIENVDSRGTITSLILYSDSCPGQNKNKIVLATIHNALLQSNNLQAIQMNYLLPGHTEMSVDSIHSTIEQSVRNITVWAPSQWATISQLARKEPAPYNVENLTHEDFLNFDDMSEKYFKGNLVGKISKIRTATFKKSHPNQMKVKFSMKDNASEEIIQIIAKPRAINRRYNTSLPITKAKYMDLKKLCDTGVIPKIFHKEYINLQHCNSKDVLLDTDVEDTVEENDY

Uniprot

X1X3M6 A0A3S2P4C8 J9LMT7 J9LAK0 A0A3S2N704 J9M4G9 + More
A0A2H1WUL7 A0A3S2LBW7 A0A3S2TF04 A0A2W1C4W6 A0A336L7N8 A0A2S2P112

Pubmed

28756777

EMBL

ABLF02010023 RSAL01000569 RVE41377.1 ABLF02010195 ABLF02010196 ABLF02055224 + More
ABLF02026661 ABLF02026674 ABLF02026675 ABLF02041813 ABLF02060074 RSAL01005524 RVE40000.1 ABLF02022524 ODYU01011180 SOQ56761.1 RSAL01000260 RVE43346.1 RSAL01000210 RVE44232.1 KZ150145 PZC72904.1 UFQS01001897 UFQT01001897 SSX12663.1 SSX32106.1 GGMR01010491 MBY23110.1

Proteomes

UP000007819 UP000283053

Pfam

PF13359 DDE_Tnp_4 + More
PF16064 DUF4806

Interpro

IPR027806   HARBI1_dom        + More
IPR032071   DUF4806
IPR012337   RNaseH-like_sf

SUPFAM

SSF53098 SSF53098

ProteinModelPortal

X1X3M6 A0A3S2P4C8 J9LMT7 J9LAK0 A0A3S2N704 J9M4G9 + More
A0A2H1WUL7 A0A3S2LBW7 A0A3S2TF04 A0A2W1C4W6 A0A336L7N8 A0A2S2P112

KEGG

101740008 no KO assigned | (RefSeq) uncharacterized LOC101740008

GO

Length:

816

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.00145

Exp number, first 60 AAs:

0

Total prob of N-in:

0.00022

outside

1 - 816

Pi

276.385413

Theta

199.777945

Tajima's D

2.388378

CLR

0.163048

CSRT

0.935003249837508

Interpretation

Uncertain

Sequence

Summary

Ontologies

Topology

Population Genetic Test Statistics

Multiple alignment of Orthologues

Gene Tree