SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO10953  Validated by peptides from experiments
Annotation
PREDICTED:_myofilin_isoform_X4_[Bombyx_mori]
Location in the cell
Mitochondrial   Reliability : 2.973
 

Sequence

CDS
ATGATTGGCAGAAACGAGACGCCGTCGAAGAAAGCCAGATTTTGGCAGTCCTTCGTGCGTTCTCTAAAAGGTTCGGAAGACATCAGAGCCGAGGAAAGGTACAGGCCAACACGCCGCAGCGTTTTTCCCGAACTCCTGTCGACCTACCCTTACTCCAAGTCGATTTACGACGACCCTATCGCTGCCGCTGAGAGGATTACGGTACCCGGCTACCGTTACCTGCCTGTCCATCGCGAGATCTACGGCTACTCCCCGCGCCCTATCTATGCCCACAACTACCCTCGCTCTCTCGATTATTACAGGCCAATCTACCACGTGCCAAGACGCGTGCGACGTGGAGTTGATCCCTTCGACGCCCACAAGGCATGGCAGGACCATCTCGACAGGCTGGCTGCCATCGACCGGCTGTACCCATCTCGCTACGGACTCTACCTAAAGGACCGGGCCTACCCCATCACCGACTTTACCGCACCCCTCATCGACCCCCTTAAGCCTAAGAGTCTAAAAGGCATCGAATATGAGCCGGACAACAAGCCCCACTGGGGAACAGCCGCGGCTTACTAA
Protein
MIGRNETPSKKARFWQSFVRSLKGSEDIRAEERYRPTRRSVFPELLSTYPYSKSIYDDPIAAAERITVPGYRYLPVHREIYGYSPRPIYAHNYPRSLDYYRPIYHVPRRVRRGVDPFDAHKAWQDHLDRLAAIDRLYPSRYGLYLKDRAYPITDFTAPLIDPLKPKSLKGIEYEPDNKPHWGTAAAY

Summary

EMBL
FJ655383    ACM68437.1    FJ807488    ACO90370.1    FJ807485    ACO90367.1    + More
FJ807487    ACO90369.1    AK402361    BAM18983.1    GDQN01004629    JAT86425.1    AGBW02011299    OWR46863.1    NWSH01000347    PCG77193.1    GDQN01010492    JAT80562.1    AB264686    BAG30761.1    KQ459604    KPI92538.1    GDQN01008619    JAT82435.1    KQ459765    KPJ20056.1    GDQN01011053    JAT80001.1    PCG77192.1    PCG77197.1    KZ150480    PZC70730.1    PCG77199.1    PCG77198.1    ODYU01008324    SOQ51811.1    JTDY01000330    KOB77669.1    AJVK01014675    GFDF01000003    JAV14081.1    GFDF01000272    JAV13812.1    CH933806    KRG00668.1    CH902617    KPU79579.1    CM000160    KRK03788.1    AF532032    AAQ09931.1    CH940650    KRF83151.1    AE014297    AAN13625.1    KRK03784.1    CM000070    EIM52800.2    BT001435    AJ535260    AAN13627.1    AAN71190.1    AHN57334.1    CAD61346.1    KRT00748.1    KQ971339    EFA01468.1    GBXI01005952    GBXI01005192    GBXI01001406    JAD08340.1    JAD09100.1    JAD12886.1    GBXI01017401    GBXI01014834    JAC96890.1    JAC99457.1    AJWK01008735    CH964272    KRF99981.1    KK107039    EZA61892.1    GEZM01068313    JAV67019.1    KRG00667.1    KRK03781.1    KRK03792.1    ACZ94908.1    GAMC01017576    JAB88979.1    KRT00749.1    CM000364    EDX12879.1    KRF83157.1    ACZ94907.1    KT748827    AMK48608.1    GDHF01015363    JAI36951.1    GAKP01019096    GAKP01019092    JAC39860.1    GDAI01001097    JAI16506.1    AGB95966.1    GAKP01019090    JAC39862.1    KRF83153.1    EAL28474.3    KRF83155.1    CP012526    ALC46912.1    CVRI01000044    CRK96822.1    GL452767    EFN76900.1    QOIP01000006    RLU21749.1    NNAY01000489    OXU28033.1    GFDG01000497    JAV18302.1    OUUW01000007    SPP83537.1    CH916374    EDV91341.1    EDW97509.1    KRG00666.1    KPU79581.1    KRK03785.1    BT081982    ACO53097.1    ACZ94905.1    ACZ94909.1    AY058374    AY113622    AAL13603.1    AAM29627.1    AAN13626.1    CAD61347.1    KPU79580.1    KRF83152.1    GL438870    EFN68093.1    BT072881    AAF55134.1    ACN67105.1    ACZ94906.1    AGB95965.1    KRK03786.1    KRK03789.1    KRF83154.1    KQ978396    KYM94227.1    EIM52799.1    KQ980050    KYN18010.1    KQ981533    KYN40110.1    KQ435007    KZC13428.1    GAMC01017575    JAB88980.1    JRES01001243    KNC24333.1    EDW13836.2   
Pfam
PF15929   Myofilin
Interpro
IPR031828   Myofilin       

Ontologies

Topology

Length:
187
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0
Exp number, first 60 AAs:
0
Total prob of N-in:
0.16542
outside
1  -  187
 
 

Population Genetic Test Statistics

Pi
180.369776
Theta
186.033565
Tajima's D
0.516776
CLR
0.824262
CSRT
0.52102394880256
Interpretation
Uncertain
Peptides ×
Source Sequence Identity Evalue
28467696 EIYGYSPR 100.00 1e-05
28556443 SLDYYRPIYHVPR 100.00 0.006
28556443 SIYDDPIAAAER 100.00 0.006
28556443 SLDYYRPIYHVPR 100.00 0.011
28556443 SIYDDPIAAAER 100.00 0.011
28556443 PIYAHNYPR 100.00 0.011
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