Silkworm Genome Informatics Database

Gene

KWMTBOMO10943

Pre Gene Modal

BGIBMGA008499

Annotation

PREDICTED:_uncharacterized_protein_LOC106139518_[Amyelois_transitella]

Location

Bomo_Chr18(+):7809933-7829625 View in EpiBrowser

Location in the cell

PlasmaMembrane Reliability : 0.968

CDS

ATGGACACCTTAACGTGGTTATCGCTCGGGCTGCAACTGGCAGCGTTATGTTCTATAGTCGGAGCACTACTCTTGTACTTGCTCAGGAAAGTCAGGGTGGCGGAGGTTCTACCTGTGGACAGCGCAAAGACCGTACTTGTCACTTCTGTGGACACCGCACTTGGATTGCAGATAGCAACATACCTTAGTGGTCGCGGGTGGCGAGTAATTGCTGGATGTCGGTCCGGAGGCCTTGGGGCTCGGCTCGCTGATTCCTGGCTGCAAGCTCACGTCGCGTCAACTTCTGAGAATGAGCCTCCTCCGAGACTTGTGACTCTTGACCTGGACGTTGCTAGAGAAGACATGTTGGAGGAAGCCGCGAGAGCTACGGCGCAGCATTTACCGGCTGGCGAGCACGGTATTTGGGCTGTAATCAACACGGCTGGTAGCAGCGGACGAGGTGGTGCGTCTTGTTGGGAGAGCGCACTTCGGGGCAACGTACTTGGAGCACTCCGCGTCGCGCGCACCTTCTCCCCACTATTGGCGGCTGCTGCAGCTGATCACCCTTATGCCGGACGACTTTTTTACATAGGTTTGACATCGGACACGGCGTGCGAGAGTCTAGCCCGGACCGAGGCTGAGAACGGTGAAGGCAGTGCGGGCGCCGCGGCGGTGCGTTGGGGGACATGGGGCGCCGCACGCGCACTGCGCGCCAGTCTTCGGTCAAGGCGTCTGAACGTAGTGCTACTACACGCACCGGATCTGTCTGCTGCCGAGATATACGCTCCACCGGCGCAATTGCAACCGCCCAGTCAACCGGTCAGCCGCCCTGATACGCCGAATTCGGACGTTAGTGCATCGACAGCATACTGCGCGGTGACGATGCCCGGCGAAGCAGCCGAATACAGCGCGAAAGTTCTGCCAACGTGCGCTCTCAAAGTATTGGAGGAAGCTTTAATCGCACCGTCTCCACGCGATTCGTACTATCTCAAAGTAAAACAGGACTCGTGGTTCACGAGAATGCCCTCGCTCAGGGTTGTCCCTTAA

Protein

MDTLTWLSLGLQLAALCSIVGALLLYLLRKVRVAEVLPVDSAKTVLVTSVDTALGLQIATYLSGRGWRVIAGCRSGGLGARLADSWLQAHVASTSENEPPPRLVTLDLDVAREDMLEEAARATAQHLPAGEHGIWAVINTAGSSGRGGASCWESALRGNVLGALRVARTFSPLLAAAAADHPYAGRLFYIGLTSDTACESLARTEAENGEGSAGAAAVRWGTWGAARALRASLRSRRLNVVLLHAPDLSAAEIYAPPAQLQPPSQPVSRPDTPNSDVSASTAYCAVTMPGEAAEYSAKVLPTCALKVLEEALIAPSPRDSYYLKVKQDSWFTRMPSLRVVP

Uniprot

A0A212FCA9 A0A2A4J9I2 A0A2W1BIP0 A0A2H1W7H6 A0A194RV76 A0A194PGX0 + More
A0A0L7KXJ4 E0VLD7 A0A146KPR4 A0A0V0G665 A0A023EZV8 J3JX54 U4UL40 N6TGZ8

Pubmed

22118469 28756777 26354079 26227816 20566863 26823975 + More
25474469 22516182 23537049

EMBL

AGBW02009208 OWR51375.1 NWSH01002487 PCG68194.1 KZ150127 PZC73097.1 + More
ODYU01006812 SOQ49008.1 KQ459765 KPJ20066.1 KQ459604 KPI92547.1 JTDY01004708 KOB67855.1 DS235271 EEB14193.1 GDHC01021233 GDHC01006247 JAP97395.1 JAQ12382.1 GECL01003234 JAP02890.1 GBBI01003932 JAC14780.1 BT127822 AEE62784.1 KB632374 ERL93822.1 APGK01027271 KB740654 ENN79704.1

Proteomes

UP000007151 UP000218220 UP000053240 UP000053268 UP000037510 UP000009046 + More
UP000030742 UP000019118

Pfam

PF00106 adh_short

Interpro

IPR036291 NAD(P)-bd_dom_sf + More
IPR002347 SDR_fam

SUPFAM

SSF51735 SSF51735

ProteinModelPortal

A0A212FCA9 A0A2A4J9I2 A0A2W1BIP0 A0A2H1W7H6 A0A194RV76 A0A194PGX0 + More
A0A0L7KXJ4 E0VLD7 A0A146KPR4 A0A0V0G665 A0A023EZV8 J3JX54 U4UL40 N6TGZ8

KEGG

101736981 no KO assigned | (RefSeq) uncharacterized LOC101736981

GO

GO:0016021 GO:0003858

Length:

341

Number of predicted TMHs:

1

Exp number of AAs in TMHs:

23.42715

Exp number, first 60 AAs:

23.10647

Total prob of N-in:

0.57751

POSSIBLE N-term signal

sequence

inside

1 - 4

TMhelix

5 - 27

outside

28 - 341

Pi

28.324966

Theta

183.235307

Tajima's D

1.519381

CLR

0.174997

CSRT

0.791060446977651

Interpretation

Uncertain

Sequence

Summary

Ontologies

Topology

Population Genetic Test Statistics