Gene

KWMTBOMO10937  Validated by peptides from experiments

Pre Gene Modal

BGIBMGA008498

Annotation

PREDICTED:_synaptobrevin_homolog_YKT6_[Amyelois_transitella]

Location

Bomo_Chr18(+):7473763-7474777      View in EpiBrowser

Location in the cell

Extracellular   Reliability : 1.237 Mitochondrial   Reliability : 1.365

CDS

ATGGTGAAAGTTTATGCACTACTTGTATTGTACAAAGGGATTAATAATGCATCCATTCTGAAAGGTGCTTATGATCTTCGGAGTTTTAGTTATTTTCAAAGAAGTTCAGTGCAAGAATTTATGACTTTTGTTAGTAAAACTATGGTAGAGAGGACACATCCAGCATCAAGGCAATCAGTTAAGGAAGGAGAGTATATGTTGCAAGTGTATGTGCGTGCAGATAATTTAGCTGGAGTATTGATATCCGATCACGAGTATCCTAACAGAGTAGCACACACTTTGATCACTAAAACTCTTGATGAGTTTACAGCTGCAGTTCCATCAAGCACTTGGGCTACGGGTAAAGAATCAACAATTGATTTTCCATCATTGGCTTTACATTTAGAAAAATACCAAAATCCCAAAGAAGCTGATGCATTGACGAAAATTCAAAATGATCTGGATGAAACGAAAATTATTTTACATGATACAATAAAAGCTGTACTTGAGAGAGGTGAGAAGTTAGATGATTTGGTTGCTAAGTCAGACAGCCTGTCGATGCACAGTAAAGCATTTTATAAGACTGCGGCAAAAACTAACAGTTGTTGTAATTTTTGA

Protein

MVKVYALLVLYKGINNASILKGAYDLRSFSYFQRSSVQEFMTFVSKTMVERTHPASRQSVKEGEYMLQVYVRADNLAGVLISDHEYPNRVAHTLITKTLDEFTAAVPSSTWATGKESTIDFPSLALHLEKYQNPKEADALTKIQNDLDETKIILHDTIKAVLERGEKLDDLVAKSDSLSMHSKAFYKTAAKTNSCCNF

Similarity

Belongs to the synaptobrevin family.

Uniprot

H9JG51   A0A1E1W937   A0A0L7K4L8   A0A194RRX2   A0A194PGX4   A0A212FC97   + More
A0A3S2PBG1   S4PLT7   A0A2A4K487   A0A2H1VJ73   A0A067R4B2   A0A1B6H5H6   A0A2P8Z3X6   A0A1B6MBP4   V5H0R3   A0A1B6EPP2   A0A0L0C3V7   A0A0A1WK66   A0A1S4EL57   A0A0C9QYU0   A0A1B6DPP0   A0A1W4XKL4   A0A034VU63   A0A0P4VK39   R4FLZ8   A0A1I8MFN8   A0A0K8WDS1   A0A2S2QMV8   A0A023FAI0   A0A224XY14   A0A069DX31   W8AN30   K7J9X7   A0A0T6BBM5   E2ATZ0   B4JJ61   A0A2R7X143   A0A1B0G8Q6   A0A1A9ZKS3   A0A151IE21   A0A026W1U3   A0A1I8P5V8   A0A1Y1K9T7   A0A0K8TNL3   A0A1A9YMF1   A0A1A9UW61   A0A1B0BDJ0   U5EYV5   A0A2S2PRQ7   J9JL88   A0A195DKV3   A0A1Q3FDS8   B0WYR1   A0A2H8TKU2   J9HY77   A0A1L8DVP7   A0A310SP11   A0A151HXX3   A0A158NJG3   A0A1S4G6N8   A0A1B0CWA5   A0A1B0DNP3   A0A2A3ENB0   V9IMG8   A0A087ZNU2   A0A0V0G8D3   A0A195F6E2   A0A1W4VVF7   A0A023EJ92   A0A0A9ZC69   Q29I28   B4H4J6   A0A336KNR0   A0A0M9A0J6   B4R690   B4Q0Q3   B4IL54   B3NTV1   Q9W3M8   A0A182G603   A0A2W1BTU6   N6T1G7   A0A182FJK2   A0A232EY42   A0A2M4C067   B4L309   A0A1A9W8Q2   B4M374   A0A0L7RAU3   A0A2M4AS41   B4NDZ3   A0A154PAB0   A0A3B0KT95   A0A0M4EW51   A0A182W5N3   A0A182RHL8   A0A084VVH9   W5JNV0   A0A182LZC7   E2C7F0  

Pubmed

19121390    26227816    26354079    22118469    23622113    24845553    + More
29403074    26108605    25830018    25348373    27129103    25315136    25474469    26334808    24495485    20075255    20798317    17994087    24508170    30249741    28004739    26369729    17510324    21347285    24945155    25401762    26823975    15632085    17550304    10731132    12537568    12537572    12537573    12537574    16110336    17569856    17569867    26109357    26109356    26483478    28756777    23537049    28648823    18057021    24438588    20920257    23761445   

EMBL

BABH01001989    GDQN01007570    GDQN01000885    JAT83484.1    JAT90169.1    JTDY01010867    + More
JTDY01009869    KOB57937.1    KOB62416.1    KQ459765    KPJ20070.1    KQ459604    KPI92552.1    AGBW02009208    OWR51369.1    RSAL01000123    RVE46632.1    GAIX01000416    JAA92144.1    NWSH01000165    PCG78889.1    ODYU01002848    SOQ40841.1    KK852714    KDR17908.1    KDR17910.1    GECU01037751    JAS69955.1    PYGN01000208    PSN51198.1    GEBQ01006627    JAT33350.1    GALX01000609    JAB67857.1    GECZ01029880    JAS39889.1    JRES01000948    KNC26896.1    GBXI01015394    GBXI01014848    GBXI01008998    JAC98897.1    JAC99443.1    JAD05294.1    GBYB01005837    JAG75604.1    GEDC01009660    JAS27638.1    GAKP01012092    GAKP01012091    JAC46861.1    GDKW01001197    JAI55398.1    ACPB03000854    ACPB03000855    GAHY01001188    JAA76322.1    GDHF01017789    GDHF01008672    GDHF01004153    GDHF01003304    JAI34525.1    JAI43642.1    JAI48161.1    JAI49010.1    GGMS01009882    MBY79085.1    GBBI01000693    JAC18019.1    GFTR01003333    JAW13093.1    GBGD01003005    JAC85884.1    GAMC01016365    JAB90190.1    AAZX01002316    LJIG01002227    KRT84713.1    GL442747    EFN63121.1    CH916370    EDV99613.1    KK856331    PTY25523.1    CCAG010000299    KQ977901    KYM98914.1    KK107503    QOIP01000006    EZA49546.1    RLU21398.1    GEZM01093652    JAV56206.1    GDAI01001897    JAI15706.1    JXJN01012502    GANO01001789    JAB58082.1    GGMR01019405    MBY32024.1    ABLF02038808    KQ980762    KYN13515.1    GFDL01009329    JAV25716.1    DS232196    DS232309    EDS37171.1    EDS39564.1    GFXV01002835    MBW14640.1    CH477242    EJY57420.1    GFDF01003584    JAV10500.1    KQ762329    OAD55949.1    KQ976748    KYM75313.1    ADTU01017851    ADTU01017852    ADTU01017853    ADTU01017854    AJWK01032126    AJVK01007640    KZ288204    PBC33293.1    JR053838    AEY62027.1    GECL01002164    JAP03960.1    KQ981798    KYN35742.1    GAPW01004572    JAC09026.1    GBHO01043344    GBHO01023400    GBHO01023399    GBHO01004199    GBRD01010325    GBRD01010324    GDHC01008948    GDHC01004845    JAG00260.1    JAG20204.1    JAG20205.1    JAG39405.1    JAG55499.1    JAQ09681.1    JAQ13784.1    CH379064    EAL31578.1    CH479209    EDW32747.1    UFQS01000526    UFQT01000526    SSX04623.1    SSX24986.1    KQ435798    KOX73349.1    CM000366    EDX17367.1    CM000162    EDX02324.1    CH480865    EDW53671.1    CH954180    EDV47514.1    AE014298    AY059454    AAF46294.1    AAL13360.1    JXUM01007378    JXUM01007379    JXUM01007380    KQ560239    KXJ83652.1    KZ149920    PZC77771.1    APGK01047882    KB741092    KB632050    ENN73919.1    ERL88310.1    NNAY01001679    OXU23243.1    GGFJ01009523    MBW58664.1    CH933810    EDW07895.1    CH940651    EDW65249.1    KRF82145.1    KQ414618    KOC67945.1    GGFK01010294    MBW43615.1    CH964239    EDW81962.1    KQ434857    KZC08839.1    OUUW01000042    SPP89959.1    CP012528    ALC49622.1    ATLV01017185    KE525157    KFB41973.1    ADMH02000803    ETN64983.1    AXCM01004821    GL453369    EFN76137.1   

Proteomes

UP000005204    UP000037510    UP000053240    UP000053268    UP000007151    UP000283053    + More
UP000218220    UP000027135    UP000245037    UP000037069    UP000079169    UP000192223    UP000015103    UP000095301    UP000002358    UP000000311    UP000001070    UP000092444    UP000092445    UP000078542    UP000053097    UP000279307    UP000095300    UP000092443    UP000078200    UP000092460    UP000007819    UP000078492    UP000002320    UP000008820    UP000078540    UP000005205    UP000092461    UP000092462    UP000242457    UP000005203    UP000078541    UP000192221    UP000001819    UP000008744    UP000053105    UP000000304    UP000002282    UP000001292    UP000008711    UP000000803    UP000069940    UP000249989    UP000019118    UP000030742    UP000069272    UP000215335    UP000009192    UP000091820    UP000008792    UP000053825    UP000007798    UP000076502    UP000268350    UP000092553    UP000075920    UP000075900    UP000030765    UP000000673    UP000075883    UP000008237   

PRIDE

H9JG51   

Pfam

PF00957   Synaptobrevin        + More
PF13774   Longin
PF16076   Acyltransf_C
PF01553   Acyltransferase

Interpro

IPR010908   Longin_dom        + More
IPR011012   Longin-like_dom_sf       
IPR001388   Synaptobrevin       
IPR002123   Plipid/glycerol_acylTrfase       
IPR032098   Acyltransf_C       

SUPFAM

SSF64356   SSF64356       

ProteinModelPortal

H9JG51   A0A1E1W937   A0A0L7K4L8   A0A194RRX2   A0A194PGX4   A0A212FC97   + More
A0A3S2PBG1   S4PLT7   A0A2A4K487   A0A2H1VJ73   A0A067R4B2   A0A1B6H5H6   A0A2P8Z3X6   A0A1B6MBP4   V5H0R3   A0A1B6EPP2   A0A0L0C3V7   A0A0A1WK66   A0A1S4EL57   A0A0C9QYU0   A0A1B6DPP0   A0A1W4XKL4   A0A034VU63   A0A0P4VK39   R4FLZ8   A0A1I8MFN8   A0A0K8WDS1   A0A2S2QMV8   A0A023FAI0   A0A224XY14   A0A069DX31   W8AN30   K7J9X7   A0A0T6BBM5   E2ATZ0   B4JJ61   A0A2R7X143   A0A1B0G8Q6   A0A1A9ZKS3   A0A151IE21   A0A026W1U3   A0A1I8P5V8   A0A1Y1K9T7   A0A0K8TNL3   A0A1A9YMF1   A0A1A9UW61   A0A1B0BDJ0   U5EYV5   A0A2S2PRQ7   J9JL88   A0A195DKV3   A0A1Q3FDS8   B0WYR1   A0A2H8TKU2   J9HY77   A0A1L8DVP7   A0A310SP11   A0A151HXX3   A0A158NJG3   A0A1S4G6N8   A0A1B0CWA5   A0A1B0DNP3   A0A2A3ENB0   V9IMG8   A0A087ZNU2   A0A0V0G8D3   A0A195F6E2   A0A1W4VVF7   A0A023EJ92   A0A0A9ZC69   Q29I28   B4H4J6   A0A336KNR0   A0A0M9A0J6   B4R690   B4Q0Q3   B4IL54   B3NTV1   Q9W3M8   A0A182G603   A0A2W1BTU6   N6T1G7   A0A182FJK2   A0A232EY42   A0A2M4C067   B4L309   A0A1A9W8Q2   B4M374   A0A0L7RAU3   A0A2M4AS41   B4NDZ3   A0A154PAB0   A0A3B0KT95   A0A0M4EW51   A0A182W5N3   A0A182RHL8   A0A084VVH9   W5JNV0   A0A182LZC7   E2C7F0  

PDB

3KYQ     E-value=3.25368e-56,     Score=549

KEGG

101736850    K08516 synaptobrevin homolog YKT6 | (RefSeq) synaptobrevin homolog YKT6

PATHWAY

04130    SNARE interactions in vesicular transport - Bombyx mori (domestic silkworm)

GO

GO:0016192   GO:0016021   GO:0016020   GO:0005768   GO:0030133   GO:0006888   GO:0005484   GO:0005794   GO:0031201   GO:0006890   GO:0019706   GO:0016746   GO:0006810   GO:0051603   GO:0005839   GO:0051028   GO:0005622   GO:0003824  

Length:

198

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.16224

Exp number, first 60 AAs:

0.16224

Total prob of N-in:

0.04048

outside

1  -  198

 

 

Pi

140.613569

Theta

214.691428

Tajima's D

-1.086374

CLR

169.254146

CSRT

0.121793910304485

Interpretation

Uncertain