Gene

KWMTBOMO10935

Pre Gene Modal

BGIBMGA008497

Annotation

PREDICTED:_transcription_initiation_factor_TFIID_subunit_8_[Amyelois_transitella]

Location

Bomo_Chr18(+):7465363-7469027      View in EpiBrowser

Full name

Transcription initiation factor TFIID subunit 8      

Alternative Name

Protein prodos

Location in the cell

Nuclear   Reliability : 2.787

CDS

ATGTCAGAAAAAACTGAAACTACATCTGATGCTCGTCGACGTATCTTAAACATTGCAGTTTCTACGGTATTATTGGAGACCGGTTTCGATGCTGCTGATAAAGTTTCGTTGGAAACTTTGACTGAAATGCTTCAATGTTTTTTTGCAGAAGTTGGGAATTCGGCGAAAGGATTTTGTGAGCTATCTGGACGGGTGGAGCCAGTGTTGGGTGATGTTGTAATGGCACTTATTAACATGGGTATAAGCTTACAGGGTATTGAACAATATGCTGCTCGTCCAAATCGGCATGTAATTCAACCTCCTCAGCAAGCTCCTGCACCTCGCACCCCAGCTATGTTGTCAGCTGGCTCTAAAGCTAAACCAGCACCACATATACCTTTTCATTTGCCTCCATTACCAGATCCACATGCATACATCAGAACACCTACTCACAAGCAACCAGTAACTGAATATGAAGCCATTCGAGAGAAGGCAGCAACCCAAAAAAGAGACATTGAACGTGCTTTGACTAAATTCTTAGCAAAGACAAGTGAAACCCATAATTTATTTAATACAGAAGACAATCAGGTTTTTCCATTAATCGCCTGTAAGCCTACGTTTCCAGCTTATTTGCCCTGTCTTTTACCAACGGACCAAGTCTTTGATTTTGATGAATTAGAATATCATTTTCAAGTCGCTAACAGAACTGAAGACTTGCCTGCTGATAAAAAAGATCAATCAGACAATGAAGGCGAAAATGGCGCTGACAATGATAATGCAAATATTTCACAATCTGAAAATCAAGAAAGTGCATTAACATCCAGTCCAGAGAGAAATAAATCTGGTGGATAG

Protein

MSEKTETTSDARRRILNIAVSTVLLETGFDAADKVSLETLTEMLQCFFAEVGNSAKGFCELSGRVEPVLGDVVMALINMGISLQGIEQYAARPNRHVIQPPQQAPAPRTPAMLSAGSKAKPAPHIPFHLPPLPDPHAYIRTPTHKQPVTEYEAIREKAATQKRDIERALTKFLAKTSETHNLFNTEDNQVFPLIACKPTFPAYLPCLLPTDQVFDFDELEYHFQVANRTEDLPADKKDQSDNEGENGADNDNANISQSENQESALTSSPERNKSGG

Description

TFIID is a multimeric protein complex that plays a central role in mediating promoter responses to various activators and repressors.

Subunit

Belongs to the TFIID complex which is composed of TATA binding protein (Tbp) and a number of TBP-associated factors (TAFs). Histone fold interacts with N-terminus of Taf10b.

Similarity

Belongs to the TAF8 family.

Keywords

Complete proteome   Nucleus   Phosphoprotein   Reference proteome   Transcription   Transcription regulation  

Feature

chain  Transcription initiation factor TFIID subunit 8

Uniprot

A0A194RV79   A0A194PHM7   A0A2H1VJ30   A0A2A4K4Q1   A0A2W1BY76   A0A212FCC5   + More
I4DRV0   A0A3S2NBE9   S4PSZ0   H9JG50   A0A1L8DI39   A0A034WFA8   W8C8M9   A0A0K8WDZ2   A0A0K8WCS7   A0A0L0BUE7   Q174K2   A0A1B0FAF2   A0A182GWU5   A0A1A9Z1P9   A0A1A9X8T9   A0A1B0C3B7   A0A084WIY5   A0A1A9WTD5   A0A1I8N819   A0A336KVU8   A0A1A9VRK7   A0A182IRZ1   A0A2M3ZJ73   A0A2M3ZJ63   A0A1Q3F9X3   A0A2M4BUC4   A0A2M4BUB4   W5JGV7   A0A182R170   A0A2M4ARF4   B0WBV2   A0A1I8PSF3   A0A1I8PSK3   A0A182JZV1   A0A182X066   A0A182KT88   A0A182HPL2   A0A1I8PSI1   A0A182P1F7   A0A182YC88   A0A182M742   A0A182FTY4   A0A182N3R5   B4L2H9   B4M7V9   A0A0L7QQR6   Q7PZV2   A0A154PH42   T1PHY5   B4Q2U6   A0A2A3EE76   A0A088ASJ7   B3NTA7   U5EJQ4   B4I6N7   A0A0M4EUQ8   A0A1W4V0R5   H1UUC4   Q9VWY6   D3TQ88   B3MXU6   E2ACF0   A0A182RAI0   A0A195BBZ0   A0A158NMU2   A0A0M9ABS9   A0A195EXV9   B4JXF0   Q29H69   A0A151WUP8   A0A0J7NRY3   B4H082   A0A151JBE8   F4WTB0   A0A3L8DKT6   A0A026WM59   B4NQ20   A0A195C7L0   A0A2P8YHZ8   K7IMW3   E2BTN5   A0A182TEM4   A0A182VFQ5   A0A2J7PX97   A0A1J1HHU9   E0VGZ1   A0A067QYI5   A0A1W4XLI9   B0WBV1   A0A069DQF3   A0A232FF83   A0A023F9C6   A0A224XVQ6  

Pubmed

26354079    28756777    22118469    22651552    23622113    19121390    + More
25348373    24495485    26108605    17510324    26483478    24438588    25315136    20920257    23761445    20966253    25244985    17994087    12364791    17550304    10731132    12537572    12537569    11134347    18327897    20353571    20798317    21347285    15632085    21719571    30249741    24508170    29403074    20075255    20566863    24845553    26334808    28648823    25474469   

EMBL

KQ459765    KPJ20071.1    KQ459604    KPI92553.1    ODYU01002848    SOQ40840.1    + More
NWSH01000165    PCG78888.1    KZ149920    PZC77770.1    AGBW02009208    OWR51368.1    AK405279    BAM20640.1    RSAL01000123    RVE46633.1    GAIX01012953    JAA79607.1    BABH01001989    GFDF01007945    JAV06139.1    GAKP01005563    JAC53389.1    GAMC01002894    JAC03662.1    GDHF01010422    GDHF01003012    JAI41892.1    JAI49302.1    GDHF01004293    GDHF01003326    JAI48021.1    JAI48988.1    JRES01001305    KNC23695.1    CH477409    EAT41503.1    CCAG010015202    JXUM01094154    KQ564107    KXJ72779.1    JXJN01024882    ATLV01023954    KE525347    KFB50179.1    UFQS01001076    UFQT01001076    SSX08857.1    SSX28768.1    GGFM01007876    MBW28627.1    GGFM01007866    MBW28617.1    GFDL01010689    JAV24356.1    GGFJ01007462    MBW56603.1    GGFJ01007463    MBW56604.1    ADMH02001571    ETN62039.1    AXCN02001100    GGFK01009857    MBW43178.1    DS231882    EDS42882.1    APCN01003265    AXCM01006018    CH933810    EDW06855.1    CH940653    EDW62876.2    KQ414785    KOC60975.1    AAAB01008986    EAA00622.4    KQ434902    KZC11175.1    KA648427    AFP63056.1    CM000162    EDX02680.1    KZ288271    PBC29774.1    CH954180    EDV46558.1    GANO01002156    JAB57715.1    CH480823    EDW55985.1    CP012528    ALC48860.1    BT133008    AEX66194.1    Y15513    AE014298    AY071604    AAF48800.1    AAL49226.1    CAA75667.1    EZ423590    ADD19866.1    CH902630    EDV38561.1    GL438494    EFN68889.1    KQ976529    KYM81737.1    ADTU01020809    KQ435710    KOX79919.1    KQ981940    KYN32732.1    CH916376    EDV95426.1    CH379064    EAL31889.2    KQ982721    KYQ51649.1    LBMM01002163    KMQ95195.1    CH479200    EDW29677.1    KQ979147    KYN22446.1    GL888334    EGI62573.1    QOIP01000007    RLU20519.1    KK107152    EZA57137.1    CH964291    EDW86245.1    KQ978231    KYM96151.1    PYGN01000580    PSN43879.1    GL450467    EFN80950.1    NEVH01020861    PNF20950.1    CVRI01000004    CRK87616.1    DS235154    EEB12647.1    KK852822    KDR15520.1    EDS42881.1    GBGD01002591    JAC86298.1    NNAY01000352    OXU28977.1    GBBI01000610    JAC18102.1    GFTR01004233    JAW12193.1   

Proteomes

UP000053240    UP000053268    UP000218220    UP000007151    UP000283053    UP000005204    + More
UP000037069    UP000008820    UP000092444    UP000069940    UP000249989    UP000092445    UP000092443    UP000092460    UP000030765    UP000091820    UP000095301    UP000078200    UP000075880    UP000000673    UP000075886    UP000002320    UP000095300    UP000075881    UP000076407    UP000075882    UP000075840    UP000075885    UP000076408    UP000075883    UP000069272    UP000075884    UP000009192    UP000008792    UP000053825    UP000007062    UP000076502    UP000002282    UP000242457    UP000005203    UP000008711    UP000001292    UP000092553    UP000192221    UP000000803    UP000007801    UP000000311    UP000075900    UP000078540    UP000005205    UP000053105    UP000078541    UP000001070    UP000001819    UP000075809    UP000036403    UP000008744    UP000078492    UP000007755    UP000279307    UP000053097    UP000007798    UP000078542    UP000245037    UP000002358    UP000008237    UP000075902    UP000075903    UP000235965    UP000183832    UP000009046    UP000027135    UP000192223    UP000215335   

PRIDE

H9JG50    Q9VWY6   

Pfam

PF10406   TAF8_C        + More
PF07524   Bromo_TP
PF01938   TRAM
PF04055   Radical_SAM
PF00919   UPF0004

Interpro

IPR037818   TAF8        + More
IPR006565   BTP       
IPR009072   Histone-fold       
IPR019473   TFIID_su8_C       
IPR006638   Elp3/MiaB/NifB       
IPR005839   Methylthiotransferase       
IPR006463   MiaB_methiolase       
IPR002792   TRAM_dom       
IPR013848   Methylthiotransferase_N       
IPR023404   rSAM_horseshoe       
IPR038135   Methylthiotransferase_N_sf       
IPR020612   Methylthiotransferase_CS       
IPR007197   rSAM       

SUPFAM

SSF47113   SSF47113       

Gene 3D

1.10.20.10     3.40.50.12160     3.80.30.20    

CDD

cd08049  TAF8

ProteinModelPortal

A0A194RV79   A0A194PHM7   A0A2H1VJ30   A0A2A4K4Q1   A0A2W1BY76   A0A212FCC5   + More
I4DRV0   A0A3S2NBE9   S4PSZ0   H9JG50   A0A1L8DI39   A0A034WFA8   W8C8M9   A0A0K8WDZ2   A0A0K8WCS7   A0A0L0BUE7   Q174K2   A0A1B0FAF2   A0A182GWU5   A0A1A9Z1P9   A0A1A9X8T9   A0A1B0C3B7   A0A084WIY5   A0A1A9WTD5   A0A1I8N819   A0A336KVU8   A0A1A9VRK7   A0A182IRZ1   A0A2M3ZJ73   A0A2M3ZJ63   A0A1Q3F9X3   A0A2M4BUC4   A0A2M4BUB4   W5JGV7   A0A182R170   A0A2M4ARF4   B0WBV2   A0A1I8PSF3   A0A1I8PSK3   A0A182JZV1   A0A182X066   A0A182KT88   A0A182HPL2   A0A1I8PSI1   A0A182P1F7   A0A182YC88   A0A182M742   A0A182FTY4   A0A182N3R5   B4L2H9   B4M7V9   A0A0L7QQR6   Q7PZV2   A0A154PH42   T1PHY5   B4Q2U6   A0A2A3EE76   A0A088ASJ7   B3NTA7   U5EJQ4   B4I6N7   A0A0M4EUQ8   A0A1W4V0R5   H1UUC4   Q9VWY6   D3TQ88   B3MXU6   E2ACF0   A0A182RAI0   A0A195BBZ0   A0A158NMU2   A0A0M9ABS9   A0A195EXV9   B4JXF0   Q29H69   A0A151WUP8   A0A0J7NRY3   B4H082   A0A151JBE8   F4WTB0   A0A3L8DKT6   A0A026WM59   B4NQ20   A0A195C7L0   A0A2P8YHZ8   K7IMW3   E2BTN5   A0A182TEM4   A0A182VFQ5   A0A2J7PX97   A0A1J1HHU9   E0VGZ1   A0A067QYI5   A0A1W4XLI9   B0WBV1   A0A069DQF3   A0A232FF83   A0A023F9C6   A0A224XVQ6  

PDB

5FUR     E-value=1.64196e-48,     Score=484

KEGG

101736484    K14649 transcription initiation factor TFIID subunit 8 | (RefSeq) transcription initiation factor TF

PATHWAY

03022    Basal transcription factors - Bombyx mori (domestic silkworm)

GO

GO:0003743   GO:0046982   GO:0005669   GO:2000736   GO:0045944   GO:0006367   GO:0009987   GO:0051539   GO:0016740   GO:0006400  

PANTHER

PTHR46469  

Subcellular location

Nucleus  

Length:

276

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.20904

Exp number, first 60 AAs:

0.13394

Total prob of N-in:

0.10625

outside

1  -  276

 

 

Pi

2.642004

Theta

31.690037

Tajima's D

-0.418974

CLR

1213.279126

CSRT

0.262386880655967

Interpretation

Uncertain