SGID The Silkworm Genome Information Database
Gene
KWMTBOMO10932
Pre Gene Modal
BGIBMGA008496
Annotation
PREDICTED:_uncharacterized_protein_LOC101745871_[Bombyx_mori]
Location in the cell
Nuclear   Reliability : 2.379
 

Sequence

CDS
ATGGACTTAGTAAATATACAGGTACTAGATCAAATAATAGAGTATTTATCGAAAATAGTTAAATCATATTATAAATTAAGTCCAAAGTTAGCGAGATTGAATAAAGATAGTGAATTGCTTCGAAACAAGCACGATCTTATTTTTGATAAACTCTGCAGTAGTAGATTTATAATGTTGCAAGCTATTCATGGACTTATAACGACATTACTAAACAACTGCTTGCACCGCGAGGACTCTAGGAAGATAATAGAATCGTGTTTGAATTTAGTCACAGTCTACAATCATCTTCTTGGCATAAGTTACAAAAAATTCAAAGCGAAATTCAACATATGCAGTAACACGTATCCAAATACTATTAGTGAAACAAAACCAATTACTTTGACCAAAATTGTACAGGTCTTGTCGAAGAGTCGTGTAGAAATTAATTGTCAACGACTTATAAATTGCTTAGTTAAGGCTTATAAGCCGCAAGAAGATTCCGATAACGACTCTAGTTCCAGTTCAGTGGACAGTTTAGAAATTTATCATACTTTAACCAAACACATAACGCCGCCATCGTCTTCCGACCGGAGAGGTTCAAATGAAAAACAGATAGTGAGCGGACAGAACTCTGACACCGATGTGCCTTATACCTCGCTAGTAAACAACGCACACGCTTTAGAAAATATTTTTAATAATGAAGATAATGTCAATAGTATTCTACAGAGCGAAGAAATGTTTATTGAAATATTATTAGATACTGTTTCGAATAAGTTTCCAACCTTACTTGGCCCCAATGGAGTAAAAAGATTGAAAACAGGTAGACTACAGGCCAGCAAAAAAGCTGCCCAAAAAGTAACCGAGTATTATCAAAATATTCTATGGGGTGATGTAGGAAGCTGTCTAGAACATATCGTCTTGTGGTGGTCTGCGTATCCCTTAGCTATGAGGTCCCCAAATACAAGTCAAAATCTTCGAGAATGGTTATTTAGCACTTTTAACATAAACAATACCCCAGATCTAATACTGTCTGCTTTGAGGATATTGGCCGATGCTTTGGGCTGCCATGTCACATCCACTTCTTGGGACAAAAATTTTGGTACTACTTTGCGGACCGATTTAACGCCAACAAACTTGAAACTTTATCCGGACCTTTCCTTGTACGTATCTGAGTGTACTGTGTCTGGTGCTAATTTCGCTCTAATGCTACAAGAATTAGTAACACTCAATAATCAGTGTGAGGTGACATGGGATTTTATATTGGGAGCGCCGATCGAGGATCTACCTATCGTCGAGCAAATACCCATTTTACATAGGCTTGATCATTCCATTCACACTTACCGGTTATGGTGCCTTGCGGTCACCCGCCGATTAGCCAATATGTGGGAGATGGATGATTTCTTCCGTGTCGCACACAATGACATGCAAGCTTGTATGGAACAATTACTTAACCTGAGATTCGCCGATCATTCGGCAACTATTGAAGAAGGGAAGATTGGGGTACATGAAAACGTTTGTGCAAAAATGAGAGAAAAATTAGTGTCCGAAGTGAAAGCCAATATACAGAAATTGAAGGAAGCTTCAGAAGAAATAACGCAGATGGTGTGCGCTGTTTGTAGTACGACAAGTTTAGCGCACTTGACGCGTATATTCCCGCATTCGTCGCACTGGAAGCGGCTCACTAATCCCCCTCAGCAGCACCACTCCCTATACGTACACTATTATCTGGATAAAATGCTACTGCCTGTGATTAAGGCAACTCAGGACGTCACCACACTAAACATGGTATTAAGAATTATGGGAGAGTCTTGGCTGCATCATATATACATGGCCAAAGTGAAATTTAGTAAAGATGCTGCTCAGCAACTCCTTGCTGATTTTAACGAGGTTCGAAACTGGTTGAATGATTGTAAGCTCCTAACGGTCGCGGCTAGGAAACAAATGTTAAATAACGAAGTTTTAAGACGATGTGAAGGTGTCGGCCGCCTGCTATTACATGCACCAGGCGATCTTATATCTATGCAGGAGTCTACTATGCAGTCTGCCCAACAAATCCGGAAAGATGTAACAGAAAACGATTCTCCAGAGCAAATGATGCCGGCGGAGATGTATGTACCGAACCAGAAACAGTGGCTCACTCTCAGAGCGGGAAAGCTGAAAGGACCTGTAGTTTTTTCTCTGTGCTGTGTCGTATTATTGTGA
Protein
MDLVNIQVLDQIIEYLSKIVKSYYKLSPKLARLNKDSELLRNKHDLIFDKLCSSRFIMLQAIHGLITTLLNNCLHREDSRKIIESCLNLVTVYNHLLGISYKKFKAKFNICSNTYPNTISETKPITLTKIVQVLSKSRVEINCQRLINCLVKAYKPQEDSDNDSSSSSVDSLEIYHTLTKHITPPSSSDRRGSNEKQIVSGQNSDTDVPYTSLVNNAHALENIFNNEDNVNSILQSEEMFIEILLDTVSNKFPTLLGPNGVKRLKTGRLQASKKAAQKVTEYYQNILWGDVGSCLEHIVLWWSAYPLAMRSPNTSQNLREWLFSTFNINNTPDLILSALRILADALGCHVTSTSWDKNFGTTLRTDLTPTNLKLYPDLSLYVSECTVSGANFALMLQELVTLNNQCEVTWDFILGAPIEDLPIVEQIPILHRLDHSIHTYRLWCLAVTRRLANMWEMDDFFRVAHNDMQACMEQLLNLRFADHSATIEEGKIGVHENVCAKMREKLVSEVKANIQKLKEASEEITQMVCAVCSTTSLAHLTRIFPHSSHWKRLTNPPQQHHSLYVHYYLDKMLLPVIKATQDVTTLNMVLRIMGESWLHHIYMAKVKFSKDAAQQLLADFNEVRNWLNDCKLLTVAARKQMLNNEVLRRCEGVGRLLLHAPGDLISMQESTMQSAQQIRKDVTENDSPEQMMPAEMYVPNQKQWLTLRAGKLKGPVVFSLCCVVLL

Summary

EMBL
BABH01001985    ODYU01002848    SOQ40836.1    NWSH01000165    PCG78904.1    KQ459604    + More
KPI92559.1    AGBW02009208    OWR51364.1    KQ459765    KPJ20076.1    KQ971372    EFA09809.1    GL451499    EFN79178.1    KQ435706    KOX80150.1    GL888633    EGI58697.1    KQ983238    KYQ46199.1    ADTU01000447    ADTU01000448    KQ979685    KYN19817.1    KQ981606    KYN39524.1    KQ976509    KYM82733.1    GL762022    EFZ22455.1    KQ414581    KOC70967.1    KZ288271    PBC29864.1    KQ759821    OAD62687.1    NEVH01027114    PNF13636.1    KK107019    EZA62782.1    PYGN01000865    PSN39904.1    GEDC01002949    JAS34349.1    GL436239    EFN72191.1    PNF13644.1    NNAY01000115    OXU30833.1    ADMH02000406    ETN66673.1    ATLV01026830    KE525419    KFB53386.1    AXCM01012226    JXUM01129063    JXUM01129064    JXUM01129065    JXUM01129066    KQ567396    KXJ69453.1    CH478007    EAT34440.1    GDHC01019733    JAP98895.1    APCN01002191    AXCN02000300    AJWK01002981    DS231836    EDS33222.1    DS235854    EEB18856.1    UFQT01000789    SSX27246.1    CM000070    EAL27263.1    CH479179    EDW23744.1    ACPB03019361    OUUW01000007    SPP82987.1    CH964232    EDW80623.1    CH902617    EDV43086.1    KRS99892.1    AE014297    AAF56047.2    CH933806    EDW14611.1    CM000160    EDW98047.2    JRES01000563    KNC30174.1    CVRI01000020    CRK90603.1    CP012526    ALC46001.1    CH954182    EDV54103.1    CH916369    EDV93026.1    CH940650    EDW67804.1    JXJN01017478    CCAG010010575    CCAG010010576    CCAG010010577    QOIP01000007    RLU20473.1    CM000364    EDX13966.1    CRK91331.1   
Pfam
PF14923   CCDC142        + More
PF13499   EF-hand_7
PF17958   EF-hand_13
Interpro
IPR026700   CCDC142        + More
IPR018247   EF_Hand_1_Ca_BS       
IPR002048   EF_hand_dom       
IPR041534   EF-hand_13       
IPR011992   EF-hand-dom_pair       
SUPFAM
SSF47473   SSF47473       

Ontologies

Topology

Length:
726
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.313520000000001
Exp number, first 60 AAs:
0.06169
Total prob of N-in:
0.00480
outside
1  -  726
 
 

Population Genetic Test Statistics

Pi
197.406228
Theta
158.384199
Tajima's D
0.634115
CLR
0.051434
CSRT
0.550072496375181
Interpretation
Uncertain
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