Gene

KWMTBOMO10931

Pre Gene Modal

BGIBMGA008495

Annotation

PREDICTED:_transmembrane_protein_185B_isoform_X2_[Papilio_xuthus]

Location

Bomo_Chr18(+):7412793-7417175      View in EpiBrowser

Location in the cell

PlasmaMembrane   Reliability : 4.989

CDS

ATGAATTTACAGACATTATTTCAAGACTTTAACCCCAGCAAATTCGTCATTCACACTTGTCTTCTAATATTTACTGCATTATTAGCGCTGAAGTTAGATAAAACCATAACATGGTCATATTGGGCAGTATTTACTCCAATATGGATTTGGAAATTTCTTGTCGTGCTCGGGGCCACTATTGGGACTTATGTGTGGTGGCAGTATCCTCACTTCAGATTGGAGGGAGAAGCATACATCCATTATAAAGCTATGCTGATAAGTCTTGCCATTCACCTAATATTACTTATGTTTGAGTTACTTGTCTGTGACCAGTTAACTACCAGCCGCCATGTATGGATCCTAGTCTTTATACCTTTAATCTTTATAAGTATAGTTTCCATTGCCATCTGTATATGGTCAGTAAAACATGATCGAAGTTATGAGTTGGAATTATTTTGTGCAGTGAATATACTTCAGTTTATATTCTTGGCCTTGAAATTGGATAAATTTATACACTGGTCCTGGGAGGTTGTGTTTGTCCCACTATGGATATTAATGTGCCTCAGCCTTGTAGGTGTTTTATACAGTATCATATTTGCTGGAATTTTACTACGAACTCCCGAAGTTAACGTACAGCAGAGACGCACAAGCTTCAACTCAGCACTTGCCTACACTTTCACTGTGATACCTATCTTGGTATTCCAGGTTCTATTAACTAACAAGTTAGATGATGGCCTATCATTTACTTATATAGTGATAGTGAGTCCGCTATTCATCAGTTATGCCACACTAATTATTATGTCGTTCAGTTCAAAAGGAGGAAACAAATGGTGGTTTGGTATCCGAAAAGATTTCTGTCAATTCTTGTTATCCGTATTTCCACTGTTGCAAGAATACGCGAATATCGCTTACAACAACAATAACGTGAACCGCTCTAACGGGATCCCGAACGAGCTTCCCGCGAACCAGGAGCCGTACAGAGATGAGGAGACCCACAAAAAAGTCAAAGAGAACAAGAGATCGGCTAAAAATCAGAAAAAAAACGAAGCTATGAAACCGGTCGTGCCTATTACCAGCATAGATATGCCGGACTGA

Protein

MNLQTLFQDFNPSKFVIHTCLLIFTALLALKLDKTITWSYWAVFTPIWIWKFLVVLGATIGTYVWWQYPHFRLEGEAYIHYKAMLISLAIHLILLMFELLVCDQLTTSRHVWILVFIPLIFISIVSIAICIWSVKHDRSYELELFCAVNILQFIFLALKLDKFIHWSWEVVFVPLWILMCLSLVGVLYSIIFAGILLRTPEVNVQQRRTSFNSALAYTFTVIPILVFQVLLTNKLDDGLSFTYIVIVSPLFISYATLIIMSFSSKGGNKWWFGIRKDFCQFLLSVFPLLQEYANIAYNNNNVNRSNGIPNELPANQEPYRDEETHKKVKENKRSAKNQKKNEAMKPVVPITSIDMPD

Uniprot

A0A3S2L6A3   A0A1E1WAG5   A0A2W1BVW1   A0A2A4K557   A0A194PN66   A0A212FCB8   + More
A0A2J7PM42   A0A1B6F6R2   A0A1B6H5F8   A0A1B6L054   A0A1B6LJH7   A0A146M5F1   A0A0A9W8D9   A0A067RBQ6   A0A2H1WQ78   N6UG20   A0A0P4VWH6   A0A0V0G9C6   A0A023FAV6   A0A069DSC7   R4G8R4   J3JXM7   E0VPU1   A0A1Y1KNH6   A0A1W4X8F3   A0A1B6E3D8   A0A194RRI3   K7J203   E2B9J6   F4WM16   A0A195FUT5   A0A151XA49   E2AK96   A0A158N951   A0A195C831   A0A026W2D9   A0A0C9RDG2   A0A088AD08   A0A2A3ELX5   A0A195DCI7   A0A195BC39   A0A232ELR2   A0A0M8ZUR8   A0A0L7KGT5   B4NBZ0   A0A1B6C868   B3N152   Q29GQ1   A0A3B0KRX0   A0A2M3Z4M0   A0A2M4AGS3   A0A2M4BSP2   A0A0N8ES82   Q9VWK7   B4R7B9   B4I722   A0A182QR00   A0A0P4WGC5   B4PWT1   A0A023ERI6   A0A0L7QWX3   A0A1D2N5H8   U5EWF6   A0A1A9WVE5   A0A1B0FIW4   A0A1A9VV96   A0A1A9Z9R6   A0A1A9YQN2   B3NUS8   W5JA08   A0A182NQZ3   A0A1W4V2V4   A0A182YNC7   A0A0K8TY60   A0A034WG65   A0A182RFZ9   A0A1W7R821   A0A182INP6   L7M7Y3   W8BY11   A0A182JRG2   A0A224YJL3   A0A131YXT4   B4JNN4   A0A2T7PT74   B0WP84   A0A1I8N4A6   A0A1E1X4I3   A0A023GM14   G3MRD4   A0A1Q3FGU2   A0A2R5LHF6   A0A1I8QEZ5   A0A1Q3FGW4   A0A131Y4X7   V4A6H8   T1IRI0   T1E842   A0A293M5Z7  

Pubmed

28756777    26354079    22118469    26823975    25401762    24845553    + More
23537049    27129103    25474469    26334808    22516182    20566863    28004739    20075255    20798317    21719571    21347285    24508170    30249741    28648823    26227816    17994087    15632085    26999592    10731132    12537568    12537572    12537573    12537574    16110336    17569856    17569867    26109357    26109356    17550304    24945155    27289101    20920257    23761445    25244985    25348373    25576852    24495485    28797301    26830274    25315136    28503490    22216098    29652888    23254933   

EMBL

RSAL01000123    RVE46638.1    GDQN01007098    JAT83956.1    KZ149920    PZC77764.1    + More
NWSH01000165    PCG78903.1    KQ459604    KPI92560.1    AGBW02009208    OWR51363.1    NEVH01024421    PNF17408.1    GECZ01023925    JAS45844.1    GECU01037767    JAS69939.1    GEBQ01022880    JAT17097.1    GEBQ01016157    JAT23820.1    GDHC01003970    JAQ14659.1    GBHO01039545    JAG04059.1    KK852807    KDR16080.1    ODYU01010245    SOQ55225.1    APGK01036620    KB740941    KB632409    ENN77582.1    ERL95166.1    GDKW01000117    JAI56478.1    GECL01001354    JAP04770.1    GBBI01000654    JAC18058.1    GBGD01001921    JAC86968.1    GAHY01000517    JAA76993.1    BT127997    AEE62959.1    DS235379    EEB15397.1    GEZM01078212    GEZM01078209    JAV62854.1    GEDC01004873    JAS32425.1    KQ459765    KPJ20077.1    GL446556    EFN87629.1    GL888217    EGI64660.1    KQ981264    KYN44052.1    KQ982353    KYQ57180.1    GL440209    EFN66137.1    ADTU01001366    KQ978220    KYM96326.1    KK107474    QOIP01000002    EZA50163.1    RLU25612.1    GBYB01006302    GBYB01006305    GBYB01006306    GBYB01006856    JAG76069.1    JAG76072.1    JAG76073.1    JAG76623.1    KZ288220    PBC32169.1    KQ980989    KYN10625.1    KQ976519    KYM82131.1    NNAY01003514    OXU19295.1    KQ435878    KOX70023.1    JTDY01009835    KOB62542.1    CH964239    EDW82349.1    GEDC01027605    JAS09693.1    CH902650    EDV30087.1    CH379064    EAL32058.1    OUUW01000015    SPP88646.1    GGFM01002694    MBW23445.1    GGFK01006659    MBW39980.1    GGFJ01006965    MBW56106.1    GDUN01000194    JAN95725.1    AE014298    AY119255    AAF48931.1    AAM51115.1    CM000366    EDX18360.1    CH480823    EDW56120.1    AXCN02001485    GDRN01015312    JAI67847.1    CM000162    EDX02815.1    GAPW01002314    JAC11284.1    KQ414706    KOC63095.1    LJIJ01000202    ODN00517.1    GANO01000600    JAB59271.1    CCAG010016654    CH954180    EDV46675.1    ADMH02002066    ETN59690.1    GDHF01033108    GDHF01016679    GDHF01009767    GDHF01005090    JAI19206.1    JAI35635.1    JAI42547.1    JAI47224.1    GAKP01005643    GAKP01005640    JAC53312.1    GEHC01000359    JAV47286.1    GACK01004628    JAA60406.1    GAMC01002318    JAC04238.1    GFPF01006691    MAA17837.1    GEDV01004770    JAP83787.1    CH916371    EDV92327.1    PZQS01000002    PVD36626.1    DS232020    EDS32129.1    GFAC01005023    JAT94165.1    GBBM01001553    JAC33865.1    JO844435    AEO36052.1    GFDL01008291    JAV26754.1    GGLE01004729    MBY08855.1    GFDL01008276    JAV26769.1    GEFM01002690    GEGO01002434    JAP73106.1    JAR92970.1    KB202620    ESO88851.1    JH431361    GAMD01002517    JAA99073.1    GFWV01011664    MAA36393.1   

Proteomes

UP000283053    UP000218220    UP000053268    UP000007151    UP000235965    UP000027135    + More
UP000019118    UP000030742    UP000009046    UP000192223    UP000053240    UP000002358    UP000008237    UP000007755    UP000078541    UP000075809    UP000000311    UP000005205    UP000078542    UP000053097    UP000279307    UP000005203    UP000242457    UP000078492    UP000078540    UP000215335    UP000053105    UP000037510    UP000007798    UP000007801    UP000001819    UP000268350    UP000000803    UP000000304    UP000001292    UP000075886    UP000002282    UP000053825    UP000094527    UP000091820    UP000092444    UP000078200    UP000092445    UP000092443    UP000008711    UP000000673    UP000075884    UP000192221    UP000076408    UP000075900    UP000075880    UP000075881    UP000001070    UP000245119    UP000002320    UP000095301    UP000095300    UP000030746   

PRIDE

Q9VWK7   

Pfam

PF10269   Tmemb_185A

Interpro

IPR019396   TM_Fragile-X-F-assoc       

ProteinModelPortal

A0A3S2L6A3   A0A1E1WAG5   A0A2W1BVW1   A0A2A4K557   A0A194PN66   A0A212FCB8   + More
A0A2J7PM42   A0A1B6F6R2   A0A1B6H5F8   A0A1B6L054   A0A1B6LJH7   A0A146M5F1   A0A0A9W8D9   A0A067RBQ6   A0A2H1WQ78   N6UG20   A0A0P4VWH6   A0A0V0G9C6   A0A023FAV6   A0A069DSC7   R4G8R4   J3JXM7   E0VPU1   A0A1Y1KNH6   A0A1W4X8F3   A0A1B6E3D8   A0A194RRI3   K7J203   E2B9J6   F4WM16   A0A195FUT5   A0A151XA49   E2AK96   A0A158N951   A0A195C831   A0A026W2D9   A0A0C9RDG2   A0A088AD08   A0A2A3ELX5   A0A195DCI7   A0A195BC39   A0A232ELR2   A0A0M8ZUR8   A0A0L7KGT5   B4NBZ0   A0A1B6C868   B3N152   Q29GQ1   A0A3B0KRX0   A0A2M3Z4M0   A0A2M4AGS3   A0A2M4BSP2   A0A0N8ES82   Q9VWK7   B4R7B9   B4I722   A0A182QR00   A0A0P4WGC5   B4PWT1   A0A023ERI6   A0A0L7QWX3   A0A1D2N5H8   U5EWF6   A0A1A9WVE5   A0A1B0FIW4   A0A1A9VV96   A0A1A9Z9R6   A0A1A9YQN2   B3NUS8   W5JA08   A0A182NQZ3   A0A1W4V2V4   A0A182YNC7   A0A0K8TY60   A0A034WG65   A0A182RFZ9   A0A1W7R821   A0A182INP6   L7M7Y3   W8BY11   A0A182JRG2   A0A224YJL3   A0A131YXT4   B4JNN4   A0A2T7PT74   B0WP84   A0A1I8N4A6   A0A1E1X4I3   A0A023GM14   G3MRD4   A0A1Q3FGU2   A0A2R5LHF6   A0A1I8QEZ5   A0A1Q3FGW4   A0A131Y4X7   V4A6H8   T1IRI0   T1E842   A0A293M5Z7  

KEGG

101736236    no KO assigned | (RefSeq) transmembrane protein 185A

GO

GO:0016021  

PANTHER

PTHR13568  

Length:

357

Number of predicted TMHs:

7

Exp number of AAs in TMHs:

162.2285

Exp number, first 60 AAs:

35.4025

Total prob of N-in:

0.41776

POSSIBLE N-term signal

sequence

outside

1  -  14

TMhelix

15  -  32

inside

33  -  44

TMhelix

45  -  67

outside

68  -  76

TMhelix

77  -  99

inside

100  -  111

TMhelix

112  -  134

outside

135  -  174

TMhelix

175  -  197

inside

198  -  208

TMhelix

209  -  231

outside

232  -  240

TMhelix

241  -  263

inside

264  -  357

 

 

Pi

306.814281

Theta

183.164296

Tajima's D

1.919526

CLR

0.005114

CSRT

0.866656667166642

Interpretation

Uncertain