Gene

KWMTBOMO10922

Annotation

PREDICTED:_alkylated_DNA_repair_protein_alkB_homolog_1_isoform_X2_[Bombyx_mori]

Location

Bomo_Chr18(-):7317789-7321192      View in EpiBrowser

Location in the cell

Nuclear   Reliability : 2.13

CDS

ATGTCTCAGAGTACAGGCGTAGATTTGTTTATGAAGCAATTTAAATATTTTAAATCTAATAAACCACAACCATCTCTCAATAGTGTCATATCTGTGGATATTACAACTTCAGAGGTGAAACTTTTAGAATGCAATACAAATTATAAATGTGAAGACAATCTTACACAGTGCTTAGGTTTGATAAACAAAAACAAATGGAAAACTTACAGTTTTGTTCAGCACCCTGGTTTAATGTTAATAAGGAATCCATTCACTGGATCTGGTCAAAGATATTGGATCAAAAGATGCTTGGAAAGATATCCAAAGAAACCGAATAAAATAAATATTGATATAGAAATTGATAATTTAGATGACTGGTGGAGAGAATGTCACAAAAGTATGGAATGTGATAAAAAATTGTTAAAAAAACTTAGGTGGACAACATTGGGTTATCATCACAATTGGAACACAAAAGCATATAGTGAAGAGAACAAGACTCCTTTTCCAGAAGATTTGTCAGAACTGTCAAGTGTCGTGGCTCAGTATCTTGGATTTGCGAAATTCAGAGCTGAGGCGGCTATTGTTAATTACTACCACAAGAATTCTACACTGTCCGCTCACACTGATCACTCGGAGGTCAACTTAGATGCACCATTATTTTCATTTAGTTTTGGCCAATCTGCTATATTTTTAATAGGGGGCCGGGAGAAGTCCATCGAACCATCAGCGATACTACTAAAAAGTGGAGACATAGTTGTAATGTCCAAAGAAGCAAGGTTGTGTTATCATGCTGTGCCTAAAATATTACCGGAATACCATCAACCATGGAATTCAGATCTTTCGGAGCTTGATTTTAATAAAATGCCATCTTTTATGTACATTTCGAATCCGAAAGAAACAATTGAAGCAATGAATGAAAATATAGAAAACGACAAGTGGAGTGAATTCGAAAATTACATCAAGGAATCCAGAATTAACATTAATGTTAGACAAGTATTGAATGAAAAACAGATTAGTTTGGCCGACGAATTTTTTTCTTAG

Protein

MSQSTGVDLFMKQFKYFKSNKPQPSLNSVISVDITTSEVKLLECNTNYKCEDNLTQCLGLINKNKWKTYSFVQHPGLMLIRNPFTGSGQRYWIKRCLERYPKKPNKINIDIEIDNLDDWWRECHKSMECDKKLLKKLRWTTLGYHHNWNTKAYSEENKTPFPEDLSELSSVVAQYLGFAKFRAEAAIVNYYHKNSTLSAHTDHSEVNLDAPLFSFSFGQSAIFLIGGREKSIEPSAILLKSGDIVVMSKEARLCYHAVPKILPEYHQPWNSDLSELDFNKMPSFMYISNPKETIEAMNENIENDKWSEFENYIKESRININVRQVLNEKQISLADEFFS

Uniprot

A0A2A4JQV1   A0A3S2P7L8   A0A194PIM9   A0A212FCB9   A0A194RRY6   E2ATD6   + More
A0A0J7L599   D2A2Y9   A0A026WYY5   B3M887   B4PX83   B4JJV9   A0A3L8DQM5   A0A1W4VGG5   A0A0M4FAC9   B4NPF7   A0A0A1XP00   Q7KUZ2   A0A0Q9XS59   F4WIF6   B4NTN0   A0A1W4V3A9   A0A1A9W347   A0A195F355   B4IKE7   A0A088AP16   B3NXI5   A0A1A9VBX9   W8BX83   A0A2J7PTW8   A0A1B0CDJ0   A0A1Q3FXQ8   A0A2A3EQL1   A0A1I8Q4B3   A0A1I8M0I6   A0A182QTH4   A0A0K8ULR5   E2BRT0   A0A1B0D5Z6   A0A0M8ZV15   A0A034WN33   A0A1B6CRH8   A0A154PNS3   A0A2Z5U5X0   J3JXN3   A0A195CLY3   U4UR50   B4L9W7   A0A1L8DGR8   A0A195BMM0   A0A1B0B012   A0A3B0JZH8   A0A3B0K1C4   D3TS40   A0A1B0A3F4   A0A0C9PGL5   A0A0K8TLE6   A0A1L8DGU5   A0A0Q9XH53   A0A182MZL8   A0A0L7QRH1   B4MGT1   U5ERD2   A0A182GEW1   A0A1A9YDF7   A0A182PI01   A0A182RCH2   A0A3B0JWP5   A0A151JRB7   A0A151X6I1   B4HCP8   A0A067QT39   B5DSJ8   R7U9X0   W5JHU6   A0A182KB03   A0A0C9PGL8   A0A182YR94   A0A182UMR2   A0A161M875   A0A146L5Y6   A0A0K8SQD1   A0A182WYB7   A0A0L8H2B8   A0A3S1HTY3   A0A182GE42   A0A2C9JZB3   A0A2H8TPX5   A0A182M8L5   Q17GQ0   A0A182UD30   A0A182HIF1   A0A182J3X6   A0A3P9A985   A0A3P9JQ04   C3XQU3   A0A084WFN9   A0A0P6IYF6   A0A0B6ZDN0  

Pubmed

26354079    22118469    20798317    18362917    19820115    24508170    + More
17994087    17550304    30249741    25830018    10731132    12537568    12537572    12537573    12537574    14709175    16110336    17569856    17569867    26109357    26109356    21719571    24495485    25315136    25348373    26760975    22516182    23537049    20353571    26369729    26483478    24845553    15632085    23254933    20920257    23761445    25244985    26823975    15562597    17510324    25069045    17554307    18563158    24438588    26999592   

EMBL

NWSH01000789    PCG74189.1    RSAL01000234    RVE43798.1    KQ459604    KPI92569.1    + More
AGBW02009208    OWR51357.1    KQ459765    KPJ20085.1    GL442548    EFN63303.1    LBMM01000532    KMQ98117.1    KQ971338    EFA01981.2    KK107063    EZA61237.1    CH902618    EDV41026.1    CM000162    EDX01846.1    CH916370    EDV99861.1    QOIP01000005    RLU22586.1    CP012528    ALC49712.1    CH964291    EDW86397.1    GBXI01002024    JAD12268.1    AE014298    BT030983    BK003152    AAS65359.1    ABV82365.1    API61815.1    DAA03352.1    CH933817    KRG07790.1    GL888175    EGI66087.1    CH983240    EDX16299.1    KQ981856    KYN34612.1    CH480852    EDW51539.1    CH954180    EDV46944.1    GAMC01002670    GAMC01002669    GAMC01002668    JAC03888.1    NEVH01021221    PNF19764.1    AJWK01007895    GFDL01002687    JAV32358.1    KZ288193    PBC33997.1    AXCN02001304    GDHF01024818    GDHF01016714    GDHF01002006    JAI27496.1    JAI35600.1    JAI50308.1    GL450024    EFN81599.1    AJVK01003548    KQ435859    KOX70576.1    GAKP01001961    JAC56991.1    GEDC01021297    GEDC01016622    JAS16001.1    JAS20676.1    KQ435007    KZC13535.1    FX985756    BBA93643.1    APGK01054658    BT128003    KB741251    AEE62965.1    ENN71845.1    KQ977580    KYN01741.1    KI206807    ERL95582.1    EDW17052.1    GFDF01008529    JAV05555.1    KQ976440    KYM86531.1    JXJN01006514    OUUW01000011    SPP86473.1    SPP86472.1    CCAG010017010    EZ424242    ADD20518.1    GBYB01000013    JAG69780.1    GDAI01002605    JAI14998.1    GFDF01008406    JAV05678.1    KRG07791.1    KQ414778    KOC61223.1    CH940687    EDW57478.1    GANO01003801    JAB56070.1    JXUM01058791    JXUM01058792    JXUM01058793    KQ562019    KXJ76891.1    SPP86474.1    KQ978607    KYN29896.1    KQ982480    KYQ56003.1    CH479382    EDW29382.1    KK852969    KDR13104.1    CH475531    EDY71386.1    AMQN01008653    KB303655    ELU02911.1    ADMH02001466    ETN62475.1    GBYB01000018    JAG69785.1    GEMB01000347    JAS02774.1    GDHC01014768    GDHC01010035    JAQ03861.1    JAQ08594.1    GBRD01010485    JAG55339.1    KQ419606    KOF82925.1    RQTK01000151    RUS86083.1    JXUM01057087    KQ561939    KXJ77105.1    GFXV01004442    MBW16247.1    AXCM01001676    CH477257    EAT45815.2    APCN01003952    APCN01003953    GG666456    EEN69538.1    ATLV01023381    KE525342    KFB49033.1    GDUN01000057    JAN95862.1    HACG01019788    CEK66653.1   

Proteomes

UP000218220    UP000283053    UP000053268    UP000007151    UP000053240    UP000000311    + More
UP000036403    UP000007266    UP000053097    UP000007801    UP000002282    UP000001070    UP000279307    UP000192221    UP000092553    UP000007798    UP000000803    UP000009192    UP000007755    UP000000304    UP000091820    UP000078541    UP000001292    UP000005203    UP000008711    UP000078200    UP000235965    UP000092461    UP000242457    UP000095300    UP000095301    UP000075886    UP000008237    UP000092462    UP000053105    UP000076502    UP000019118    UP000078542    UP000030742    UP000078540    UP000092460    UP000268350    UP000092444    UP000092445    UP000075884    UP000053825    UP000008792    UP000069940    UP000249989    UP000092443    UP000075885    UP000075900    UP000078492    UP000075809    UP000008744    UP000027135    UP000001819    UP000014760    UP000000673    UP000075881    UP000076408    UP000075903    UP000076407    UP000053454    UP000271974    UP000076420    UP000075883    UP000008820    UP000075902    UP000075840    UP000075880    UP000265140    UP000265200    UP000001554    UP000030765   

PRIDE

Q7KUZ2   

Pfam

PF13532   2OG-FeII_Oxy_2        + More
PF02297   COX6B
PF10350   DUF2428
PF01813   ATP-synt_D

Interpro

IPR027450   AlkB-like        + More
IPR005123   Oxoglu/Fe-dep_dioxygenase       
IPR004574   Alkb       
IPR037151   AlkB-like_sf       
IPR003213   Cyt_c_oxidase_su6B       
IPR016024   ARM-type_fold       
IPR036549   Cyt_c_oxidase_su6B_sf       
IPR019442   DUF2428_death-receptor-like       
IPR002699   V_ATPase_D       

SUPFAM

SSF48371   SSF48371        + More
SSF47694   SSF47694       

Gene 3D

2.60.120.590    

ProteinModelPortal

A0A2A4JQV1   A0A3S2P7L8   A0A194PIM9   A0A212FCB9   A0A194RRY6   E2ATD6   + More
A0A0J7L599   D2A2Y9   A0A026WYY5   B3M887   B4PX83   B4JJV9   A0A3L8DQM5   A0A1W4VGG5   A0A0M4FAC9   B4NPF7   A0A0A1XP00   Q7KUZ2   A0A0Q9XS59   F4WIF6   B4NTN0   A0A1W4V3A9   A0A1A9W347   A0A195F355   B4IKE7   A0A088AP16   B3NXI5   A0A1A9VBX9   W8BX83   A0A2J7PTW8   A0A1B0CDJ0   A0A1Q3FXQ8   A0A2A3EQL1   A0A1I8Q4B3   A0A1I8M0I6   A0A182QTH4   A0A0K8ULR5   E2BRT0   A0A1B0D5Z6   A0A0M8ZV15   A0A034WN33   A0A1B6CRH8   A0A154PNS3   A0A2Z5U5X0   J3JXN3   A0A195CLY3   U4UR50   B4L9W7   A0A1L8DGR8   A0A195BMM0   A0A1B0B012   A0A3B0JZH8   A0A3B0K1C4   D3TS40   A0A1B0A3F4   A0A0C9PGL5   A0A0K8TLE6   A0A1L8DGU5   A0A0Q9XH53   A0A182MZL8   A0A0L7QRH1   B4MGT1   U5ERD2   A0A182GEW1   A0A1A9YDF7   A0A182PI01   A0A182RCH2   A0A3B0JWP5   A0A151JRB7   A0A151X6I1   B4HCP8   A0A067QT39   B5DSJ8   R7U9X0   W5JHU6   A0A182KB03   A0A0C9PGL8   A0A182YR94   A0A182UMR2   A0A161M875   A0A146L5Y6   A0A0K8SQD1   A0A182WYB7   A0A0L8H2B8   A0A3S1HTY3   A0A182GE42   A0A2C9JZB3   A0A2H8TPX5   A0A182M8L5   Q17GQ0   A0A182UD30   A0A182HIF1   A0A182J3X6   A0A3P9A985   A0A3P9JQ04   C3XQU3   A0A084WFN9   A0A0P6IYF6   A0A0B6ZDN0  

PDB

3KHC     E-value=9.58702e-13,     Score=177

KEGG

101746991    K10765 alkylated DNA repair protein alkB homolog 1 [EC:1.14.11.51 4.2.99.18 1.14.11.-] | (RefSeq) al

GO

GO:0016491   GO:0055114   GO:0005739   GO:0005719   GO:0051213   GO:0008198   GO:0008168   GO:0140078   GO:0070579   GO:0042626   GO:0016021   GO:0008270   GO:0019773   GO:0004298   GO:0005839   GO:0051603   GO:0051028   GO:0005622   GO:0006810   GO:0003824  

PANTHER

PTHR16557   PTHR11671  

Length:

339

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.0039

Exp number, first 60 AAs:

0

Total prob of N-in:

0.00606

outside

1  -  339

 

 

Pi

209.22196

Theta

190.547181

Tajima's D

0.412501

CLR

1.496451

CSRT

0.486825658717064

Interpretation

Uncertain