SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO10921
Annotation
PREDICTED:_uncharacterized_protein_LOC106103507_[Papilio_polytes]
Location in the cell
PlasmaMembrane   Reliability : 4.81
 

Sequence

CDS
ATGAAAAGTCGATCGTTGATGCCTAAAAACCTCGCAGACAGAGTATGTGACCTTGAATGTGCGAAGGACCAACAGCCGACCGTCGAATTCGTTGGGCCAGTGAAGATAGTTCTCGTCGATCCTTCTAAAAAGGAAAACAGGAGAAAATCGTGTGGGGCTGCGTTTATTGCTTTGGCCAATTTGATGATGGGTGCTTCTAACATTACCATTCTGTACTACACGCTCGGTTTCAAGTTAAAACTATTTGTAAATTTGCACATTGTTTTGTGTACAATTGGGTATCAGCTATGTTTCCCTTCGGCGATATTATTGTTGAACAGCCTAAACGGTGCCAGCTCAGGGCTGAAGTTAAAACAAAGGAAGTTCCAGCATTTGTTCCTGCAATTATTCGGACTTGGTTGTGGAGCGGCGGGTTCCGCTCTTGTTTTCTTGGATCACTTTAAAATGTCGAAATTTACATTTCATTCCATTACAGGTGTTGCCTCCGGTGGTATTGCAGTACTAGCAGTTTTAACGGGTTTGATAATTTATTGTACCGGTAAAGGAACAGTCGAGGACGTATGTAAGTTTTGCCACATGTCGTATGGAGTACTGTCTTTCATATTATCTTCGGTTTGTTTCGTTTCGGGCTTGTTAAGACCGGTCTATTCTAAATGGGTACCGCTGCCCGAAATGTTGGCTTTCCCAATAATATTTTGTGTATTCGTTACTATTGTTGTCGTTTTTGGACCGGTGTATAAAGTTTTAAAGAAAATGGATTATTTTTGA
Protein
MKSRSLMPKNLADRVCDLECAKDQQPTVEFVGPVKIVLVDPSKKENRRKSCGAAFIALANLMMGASNITILYYTLGFKLKLFVNLHIVLCTIGYQLCFPSAILLLNSLNGASSGLKLKQRKFQHLFLQLFGLGCGAAGSALVFLDHFKMSKFTFHSITGVASGGIAVLAVLTGLIIYCTGKGTVEDVCKFCHMSYGVLSFILSSVCFVSGLLRPVYSKWVPLPEMLAFPIIFCVFVTIVVVFGPVYKVLKKMDYF

Summary

Pfam
PF03188   Cytochrom_B561
Interpro
IPR006593   Cyt_b561/ferric_Rdtase_TM       

Ontologies

Topology

Length:
255
Number of predicted TMHs:
6
Exp number of AAs in TMHs:
132.46946
Exp number, first 60 AAs:
8.57086
Total prob of N-in:
0.99941
inside
1  -  50
TMhelix
51  -  73
outside
74  -  82
TMhelix
83  -  105
inside
106  -  124
TMhelix
125  -  144
outside
145  -  158
TMhelix
159  -  178
inside
179  -  189
TMhelix
190  -  212
outside
213  -  226
TMhelix
227  -  249
inside
250  -  255
 
 

Population Genetic Test Statistics

Pi
207.250432
Theta
158.75506
Tajima's D
1.150225
CLR
0.010137
CSRT
0.704664766761662
Interpretation
Uncertain
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