SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO10913
Pre Gene Modal
BGIBMGA008488
Annotation
Uncharacterized_protein_OBRU01_21887_[Operophtera_brumata]
Location in the cell
Nuclear   Reliability : 4.126
 

Sequence

CDS
ATGTTAGCTTGTGTTTCTCAACCTATGGAGAAGGTGTTGCTATTTAAAGAAGGACCACCCATTGCCATGGGACCGTTAGAAACCAGCAAATTACGACATAATCACTCAGGCGCCATGAAATCCATCAAACTCTTTCAAAAATCAGACCGTCAACTCAGTGACGAAACAAAAGATAGTTCTCCGTCACACACATCATCACCGTTACTCATTAACGTTTCTGGAAGTCGTTTGAACCTAAGGAAATTAGAAAACGATAGTAAAGGAAAATCGACAAAGATTCTTGTTAACCCGGTTTGCTCAGACAGCGTCGGCAGTAGCGATGACAGCAATCGATCTAAAAATACAAACACCAAATGGAACGTTAAGAAGAAACGTCTCAAGACTGAAAGTGTCAAGATTCACAAAAAAAGCGAACGCAAAAGTGATAAAGATGATCCAATTAGTAAGGACGAAGCCAAGAAAGATAAGAAATCGATATCTTGTTTCAAAATGAAAAGTTCCGAAGATAAATCACGTCTGGACGAAGATCGAAGATTCGGCAAAGAGAACTGTACAAACGAGAACGCTAGTAATTTAATGAGCTCAACGAAGCCCGACATTATTAATCATTCAAGGAAAAATAGCAGAGAAATCCTAGTCAATGAAAGGACAATGACAGAGCAGACGCTATTAAAAACTGACCAATTGAAGACAGGAAAGACTGATAGTACTGTAGCAATTAAGGAAAATAAGGTAAGTGATTAA
Protein
MLACVSQPMEKVLLFKEGPPIAMGPLETSKLRHNHSGAMKSIKLFQKSDRQLSDETKDSSPSHTSSPLLINVSGSRLNLRKLENDSKGKSTKILVNPVCSDSVGSSDDSNRSKNTNTKWNVKKKRLKTESVKIHKKSERKSDKDDPISKDEAKKDKKSISCFKMKSSEDKSRLDEDRRFGKENCTNENASNLMSSTKPDIINHSRKNSREILVNERTMTEQTLLKTDQLKTGKTDSTVAIKENKVSD

Summary

Pfam
PF00018   SH3_1        + More
PF12796   Ank_2
Interpro
IPR001452   SH3_domain        + More
IPR020683   Ankyrin_rpt-contain_dom       
IPR036770   Ankyrin_rpt-contain_sf       
IPR002110   Ankyrin_rpt       
IPR036028   SH3-like_dom_sf       
SUPFAM
SSF50044   SSF50044        + More
SSF48403   SSF48403       
Gene 3D

Ontologies

GO

Topology

Length:
247
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.00036
Exp number, first 60 AAs:
0.00036
Total prob of N-in:
0.02647
outside
1  -  247
 
 

Population Genetic Test Statistics

Pi
253.888794
Theta
19.889385
Tajima's D
1.054514
CLR
0.260732
CSRT
0.681865906704665
Interpretation
Uncertain
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