SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO10904  Validated by peptides from experiments
Pre Gene Modal
BGIBMGA008345
Annotation
PREDICTED:_uncharacterized_protein_LOC106719791_[Papilio_machaon]
Location in the cell
Extracellular   Reliability : 2.214 Nuclear   Reliability : 1.641
 

Sequence

CDS
ATGGCGTCATTAGCTTTGTGCTTAGTTTTATTGGCAGTTCATAATATTTTAGCAGCAGAACCCAGAAATGAAGGGTTAATGGATAAGCTGAACAATGGAATGAAATTTGCCAAAGACTTTTTGGGATCAGAATCAGTAGCTTTGAAAGTAGCAGAATTTGTAGTACGTGCATTTCAAGGTAATAAAAATCCTGAAACAAACAGAAGACACCCATTGGATGATTTGAGCAACGAAAATAATGCTTATGAAGAAAACACTGAGAAAAGTGGACCTCATTCCGAAATGAATAAAACTCCAACTCCAATGGCGCCCTTAAGACATTTAGTTAAACTTTTTGGACTTCAACCAAACCAAATAACTGCTGTGGCTGTCAATGCACTCGTTTTTGTAGCACAAATGATTTCTACTTTTCTGTCGGGTCCCAATCGTCCTTTAAAGCCGCGCTCTGACGATCCTATGACTTGGATACTGAATAAAAATTCACGTAAATTACAAGAGATGATTTCCGCTGCGAAAAATGAATCTTTACCGGACAACATCGAACATTTAATTAAACGGCAAGGTTCTGATGACGAAACGGGCTGCATTCGTCTGTTGGTTTGTAAGATTACTCCTTTTATCGTGAGGATGCAGGAGGCTGTTTTTGGTAACAACGGTCGCAACGATAAAACTAAATCGAAAGGAAATGAGCAGCAAAGAAACGGAGTAGCTTCGGTAATGTACCGCTATCTACCGACGCAAGACGAAATTAACGAACATAGCGACATCTGTGAACGACGTCACAGAGATTGTAGCATAGAATAA
Protein
MASLALCLVLLAVHNILAAEPRNEGLMDKLNNGMKFAKDFLGSESVALKVAEFVVRAFQGNKNPETNRRHPLDDLSNENNAYEENTEKSGPHSEMNKTPTPMAPLRHLVKLFGLQPNQITAVAVNALVFVAQMISTFLSGPNRPLKPRSDDPMTWILNKNSRKLQEMISAAKNESLPDNIEHLIKRQGSDDETGCIRLLVCKITPFIVRMQEAVFGNNGRNDKTKSKGNEQQRNGVASVMYRYLPTQDEINEHSDICERRHRDCSIE

Summary

EMBL
ODYU01012210    SOQ58394.1    MH028122    AXY04291.1    KZ149999    PZC75342.1    + More
NWSH01002670    PCG67707.1    KQ459604    KPI92586.1    RSAL01000195    RVE44568.1    AGBW02013764    OWR42866.1    KQ461196    KPJ06536.1    JTDY01007501    KOB65156.1    JTDY01000751    KOB76014.1    NEVH01021197    PNF19997.1    KQ766789    OAD53567.1    KZ288193    PBC34112.1    KQ971338    EFA01551.1    KQ435845    KOX71170.1    GL450306    EFN81215.1    CP012525    ALC43627.1    GL440492    EFN65814.1    KQ434804    KZC06052.1    AXCM01021014    CH480815    EDW40832.1    QOIP01000001    RLU26780.1    CH477319    EAT43676.1    CH916366    EDV96478.1    CH902618    EDV40787.1    JXJN01022301    KQ978068    KYM97628.1    CM000363    EDX09823.1    GL767232    EFZ13946.1    BT023860    AAZ86781.1    AE014296    AAN11958.1    DS232225    EDS37890.1    JXUM01136077    KQ568375    KXJ69025.1    AXCN02000560    CH940647    EDW69691.1    KQ982730    KYQ51525.1    CH964168    EDW80119.1    KQ981677    KYN38099.1    APCN01003661    CH954178    EDV51167.1    GBXI01010614    JAD03678.1    OUUW01000009    SPP85411.1    CH933809    EDW18390.1    CM000159    EDW93050.1    BT030839    ABV82221.1    KK107432    EZA50886.1    JRES01001180    KNC24720.1    CH479237    EDW36749.1    CH379068    EAL31199.1    GGMR01012972    MBY25591.1    JH431071   
Pfam
PF09750   DRY_EERY
Interpro
IPR040397   SWAP        + More
IPR019147   SWAP_N_domain       

Ontologies

Topology

SignalP
Position:   1 - 18,         Likelihood:  0.991180
 
 
Length:
267
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
3.49163
Exp number, first 60 AAs:
0.47283
Total prob of N-in:
0.03883
outside
1  -  267
 
 

Population Genetic Test Statistics

Pi
169.716046
Theta
151.139825
Tajima's D
0.479578
CLR
0.1034
CSRT
0.509024548772561
Interpretation
Possibly Positive selection
Peptides ×
Source Sequence Identity Evalue
23174119 -.EVLTVLIVERHRR.- 100.00 2e-06
23174119 -.LGGLAAAPLITGPLYGGAVSTASLYK.- 100.00 2e-06
23174119 -.IIVSNEIVNSLTGMKR.- 100.00 2e-06
23174119 -.FLVCVQEAYPVR.- 100.00 2e-06
23174119 -.EVLTVLIVERHRR.- 100.00 2e-06
23174119 -.IPAVAPPQK.- 100.00 2e-06
23174119 -.NVSHCDKNFGATRNIILIMK.- 100.00 2e-06
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