SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO10880
Pre Gene Modal
BGIBMGA008355
Annotation
odorant-binding_protein_5_precursor_[Bombyx_mori]
Location in the cell
Cytoplasmic   Reliability : 1.246 Extracellular   Reliability : 1.334
 

Sequence

CDS
ATGTACACAAACTTTATTCTGATTTTTTACTTTGGAATTTCAATTTATGATGTTCGGGCTTCTTCCCTCGATGATCTGAAAATGGTCTACAAGAATGTAATCAAAGAATGTGTAGGTGACTACCCTATAACTGCTGCTGATTTAAAGTTGATCAAGGCTCGTCAAATTCCAAATGATGACATAAAGTGCGTGTTCGCGTGCGCATACAAGAAAACAGGGATGATGACCGAGGAAGGAATGTTATCAGTGGAAGGTATAAAAGATATGAGCCAAAAATATTTATCCGATAATCCAGAGCAATTGAGGAAAAGCAAAGAATTTGCGGAAGCATGCAGCAGTGTTAACGATCAACAAGTTTCAGACGGAACTAAAGGATGTGAGAGGGCGGCGTTGATTTTCAAATGTAGCACGGAGAAGATTACAAATGTAAAGTTTTTTGAAAGACTTTTTACCTACTTACCTATTGATATAAAAAGTTATATCGACTCGACGTAG
Protein
MYTNFILIFYFGISIYDVRASSLDDLKMVYKNVIKECVGDYPITAADLKLIKARQIPNDDIKCVFACAYKKTGMMTEEGMLSVEGIKDMSQKYLSDNPEQLRKSKEFAEACSSVNDQQVSDGTKGCERAALIFKCSTEKITNVKFFERLFTYLPIDIKSYIDST

Summary

EMBL
FM876238    CAS90129.1    AB525758    BAI44700.1    AB525759    BAI44701.1    + More
KZ150030    PZC74750.1    GENK01000020    JAV45893.1    NWSH01000044    PCG80294.1    KT220703    ALZ45421.1    KT261647    ALJ30188.1    JQ905625    AFM77984.1    ODYU01012344    SOQ58606.1    KX585277    ARO70170.1    KF487578    AII00976.1    KY130470    APG32538.1    KT327210    ALS03853.1    KQ459604    KPI92605.1    KF487595    AII00993.1    GCVX01000145    JAI18085.1    MF066358    AVZ44705.1    KY810177    ASA40069.1    KY810182    ASA40074.1    MG788215    AXF48733.1    LC027699    BAV56802.1    KZ149999    PZC75327.1    KT192049    ALD65902.1    KX655925    AOG12874.1    ODYU01005815    SOQ47086.1    PCG80282.1    KC817146    AGP03460.1    MG788222    AXF48740.1    ODYU01012429    SOQ58729.1    KQ461196    KPJ06551.1    KU134007    ANC68513.1    LC027693    BAV56796.1    PZC74749.1    JN088202    AER27567.1    PZC74751.1    MG820716    AYP30808.1    GCVX01000147    JAI18083.1    GCVX01000148    JAI18082.1    MG788212    AXF48730.1    GCVX01000146    JAI18084.1    GCVX01000150    JAI18080.1    PCG80293.1    KX585308    ARO70201.1    MF066359    AVZ44706.1    EZ407195    ACX53756.1    SOQ58607.1    KC817143    AGP03457.1    KF487571    AII00969.1    GENK01000019    JAV45894.1    JN571544    AEX07279.1    KC111813    AGC92788.1    HQ436359    AEB54582.1    JF720859    AFD34177.1    GCVX01000151    JAI18079.1    JN571539    AEX07274.1    PZC74744.1    HQ234491    ADY17886.1    KT192044    KT261651    ALD65897.1    ALJ30192.1    AGBW02012619    OWR44715.1    KP975124    ALT31643.1    KPJ06557.1    KPI92607.1    PZC74746.1    KF487593    AII00991.1    ODYU01012163    SOQ58318.1    PZC74743.1    KR706377    ANC60175.1    KY810180    ASA40072.1    GCVX01000166    JAI18064.1    KT991349    ANA75015.1   
Pfam
PF01395   PBP_GOBP
Interpro
IPR036728   PBP_GOBP_sf        + More
IPR006170   PBP/GOBP       
IPR027417   P-loop_NTPase       
IPR039177   SMG9       
IPR005121   Fdx_antiC-bd       
SUPFAM
SSF47565   SSF47565        + More
SSF52540   SSF52540       
Gene 3D
PDB
1P28     E-value=0.0780967,     Score=78

Ontologies

Topology

SignalP
Position:   1 - 20,         Likelihood:  0.902381
 
 
Length:
164
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
1.88519
Exp number, first 60 AAs:
1.885
Total prob of N-in:
0.09946
outside
1  -  164
 
 

Population Genetic Test Statistics

Pi
224.233764
Theta
156.746026
Tajima's D
1.353772
CLR
1.444935
CSRT
0.756362181890905
Interpretation
Uncertain
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