SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO10865  Validated by peptides from experiments
Pre Gene Modal
BGIBMGA008362
Annotation
cuticular_protein_glycine-rich_9_precursor_[Bombyx_mori]
Location in the cell
Cytoplasmic   Reliability : 1.577 Nuclear   Reliability : 1.643
 

Sequence

CDS
ATGAAGTACCATATCTTCCTGGGACTCATTGCCGCAGTGACTGCTTTTCCTGGAATAATACATGATGAAGCTCCCCAAGTCGAAGCGAAATACGACCACCAGTCTTTGATTGGTGAATCTGGACACCATCATCAAATTGAACACGAACACGCCAAATCTCACCAGTCGATCAAGTTCGAACACTTCCACCCCGTTCCTGTGTACGTGAAGAAGGAGCACAGCCACCTTCTCAAGCACCCTCTTGAAAAGGGAAAATCAGAGCAAAACCTCAAGCTGATTCACCCTGAGACTGAACACAAGCACGGCGGTGGACTTGTCCTCGAGGACGACAGACACAACATTGAACACCATATCGCTTCTGCTGGTCTTGAGCACGGAAGCTTTGAACACGGCGGTCTGGAACAAGGTCTGGAGCATGGAGGTTTGGAACACGGAGGCTATGAGCATGGTGGTTTCGAGCAAGGAGGTTATGAGCACCTATCCGGTGGCTTCAAAGGCTATGAAGGAGGCGAAGGCTTGAAGACTTACGCTGAACTTCAGCAACCAGAAGACCACGGTCATTACTACGCTGAACACGGACAGGCTTTATCTAGCGACAGCGGCGAGGGCTACAAATACGAAAGCTATTAA
Protein
MKYHIFLGLIAAVTAFPGIIHDEAPQVEAKYDHQSLIGESGHHHQIEHEHAKSHQSIKFEHFHPVPVYVKKEHSHLLKHPLEKGKSEQNLKLIHPETEHKHGGGLVLEDDRHNIEHHIASAGLEHGSFEHGGLEQGLEHGGLEHGGYEHGGFEQGGYEHLSGGFKGYEGGEGLKTYAELQQPEDHGHYYAEHGQALSSDSGEGYKYESY

Summary

Ontologies

Topology

SignalP
Position:   1 - 15,         Likelihood:  0.970245
 
 
Length:
209
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
1.52866
Exp number, first 60 AAs:
1.52866
Total prob of N-in:
0.09116
outside
1  -  209
 
 

Population Genetic Test Statistics

Pi
192.990381
Theta
233.024705
Tajima's D
-0.560676
CLR
0.071192
CSRT
0.227738613069347
Interpretation
Uncertain
Peptides ×
Source Sequence Identity Evalue
28467696 YDGQVAVFGR 95.45 9e-08
26822097 DINVYDIIGNTDK 100.00 0.028
28467696 FEGQIEQIIIETGIR 100.00 0.028
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