SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO10863  Validated by peptides from experiments
Pre Gene Modal
BGIBMGA008466
Annotation
cuticular_protein_glycine-rich_8_precursor_[Bombyx_mori]
Location in the cell
Cytoplasmic   Reliability : 1.364 Nuclear   Reliability : 1.275
 

Sequence

CDS
ATGAAAGCGTTTTTCATTTTTGCTTTAGCGTACGGAGCACAGGCTGGACTATTACAAGATCAACATGATTCATACGTGTCGTCAGCATTAGGCGCGTCGTCAGCTTCTTTCGGTCCACCTTCAAACACATACGGTCCACCACACATAAATGGTATCACAGAAGCTCACGTAAGCGGTCCGACTGTTTTAGAAGAGAGTTTAATTGAACAGCACTCACACGGCGGACACGCTTTCGATGCTGGGCACATTGACGATCACGCTCACTTCGAGGGTCATGGACATATTGATGTCCATGAGCACCACGACGATCACGGTCATATTGGAAACGGCCCGTTAGGAGGAGGTGCTGTAGAAAGTTTCGGTGCTGCGGATATCGCTTCTGGACCGGGACTATCAGGTCCTGACGCCGGTGGATTTGGTGCAGGGTTTGAAGGTGGTGCCGGAATCGAAGGTGGGTTCGGTGGTGTGGAAGGAGGCGCAGAAGGTGGTTTCTTTGCTGGTGCTGGTGGGGCTATTGGAGGAGGAATCGGTGCTTCCGGTTCTTTCGGTGAACCTAGAGTAATCGGAACCAGCGTTTCTGTTGGCCGTCCTGACCCTGGTTCCACTAGGTACGAGCTCCAGTCCGTTGTGCAAAACGTTGTTCGTCGCATCCCAATTGAAGTGACCCGTCACATCAAGGTCGCCTTCCCTCAGCCCGTACCAGTACCAGTGCCACATAAGGTAAAGGTACCAGTTCCCCAACCCTACCCAGTCCACGTGGACGTAGTCAAGAAGGTTCCCTACCCAGTATACAAAACGGAGCATGTTGAGGTGGAGAGACCAGTCCCGGTTGAGGTCGTCAAGCACATCCCTGTAGAGGTCATCAGGAAGGTGCCTATCCCTGTGGAAAGGCCTTATGAAGTCATCAAAAAGGTGCACGTTCCAGTTGAGAAGCACGTGGAGGTACCCGTACCCGTCTGGAAGCCATACCCCCTCCACATCATTAAGCACGTCACCCACTACAAGAAGAAAAGCTGCTGCTGGTGA
Protein
MKAFFIFALAYGAQAGLLQDQHDSYVSSALGASSASFGPPSNTYGPPHINGITEAHVSGPTVLEESLIEQHSHGGHAFDAGHIDDHAHFEGHGHIDVHEHHDDHGHIGNGPLGGGAVESFGAADIASGPGLSGPDAGGFGAGFEGGAGIEGGFGGVEGGAEGGFFAGAGGAIGGGIGASGSFGEPRVIGTSVSVGRPDPGSTRYELQSVVQNVVRRIPIEVTRHIKVAFPQPVPVPVPHKVKVPVPQPYPVHVDVVKKVPYPVYKTEHVEVERPVPVEVVKHIPVEVIRKVPIPVERPYEVIKKVHVPVEKHVEVPVPVWKPYPLHIIKHVTHYKKKSCCW

Summary

ProteinModelPortal

Ontologies

GO

Topology

SignalP
Position:   1 - 15,         Likelihood:  0.986311
 
 
Length:
341
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.07206
Exp number, first 60 AAs:
0.00343
Total prob of N-in:
0.00416
outside
1  -  341
 
 

Population Genetic Test Statistics

Pi
239.541726
Theta
219.690399
Tajima's D
0.229572
CLR
0.062907
CSRT
0.438078096095195
Interpretation
Uncertain
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