Silkworm Genome Informatics Database

Gene

KWMTBOMO10855

Pre Gene Modal

BGIBMGA008460

Annotation

hypothetical_protein_KGM_05785_[Danaus_plexippus]

Location

Bomo_Chr18(+):5429778-5432887 View in EpiBrowser

Location in the cell

Nuclear Reliability : 2.209

CDS

ATGCCTAAAACTGGAAAGAAACTTGAAAATAAACCGGAGCCATTGAAAAGTTCTAAACCGGAATTGGCAACAGATTCCGAACAGAATGTAAAAATTTTAAAAAAGGTGGATTCTGAAGGAAGTAACCAGAAAATACCACCACGCTTACGTCGTAACATGGAGCGGGTGGAAATGTTGGCACGGCCAACGGCTCGTCGCCTGCGCTCTTTATGGGACGAAAAATGCGCAATTTTGCCTCCCGAAAGAAGAGACAAGATTAAAAGCGCTTTAGAAGAAGATTATTTTCTTAGTCCCGAGCAAACTGAACAGTATTTTCAAGCGTTGAGTGAATCTTCGAAACGTTGGTCGGGACCAGGTGGAACGGTGAACCGCAAGGAGTTGATCGATAAACAAAAAGAGCTTCAGCAACGACAGAAATGGCTGGTTAATTTCAGCGCACAGGTGGCATACCACTTGTGTGATTACATAGCAAAAGGACAAAAAGAGATGCTAGTATCGAACAGGTTGAGAAGCATCGCTGACGTTGTGCTGGAGAGAGTCGCTGAAATATTGGGAGAACCGAAACCATCTCGGTCGAATCCAGGACGTCTAGCAAGATTTATGGTGGCTATTTCCGATCGCATTGCCGTCTGGATTGAAAACGCAGTGTATCGTGCCGATGCACTCGAAGCCTTAGAATACGACGGGCACGATGAACACATGAGACTTGATGCTGAGAAGCCTTTCTTTTAG

Protein

MPKTGKKLENKPEPLKSSKPELATDSEQNVKILKKVDSEGSNQKIPPRLRRNMERVEMLARPTARRLRSLWDEKCAILPPERRDKIKSALEEDYFLSPEQTEQYFQALSESSKRWSGPGGTVNRKELIDKQKELQQRQKWLVNFSAQVAYHLCDYIAKGQKEMLVSNRLRSIADVVLERVAEILGEPKPSRSNPGRLARFMVAISDRIAVWIENAVYRADALEALEYDGHDEHMRLDAEKPFF

Uniprot

H9JG13 A0A2W1BNH6 A0A212EW15 A0A2A4JFH3 A0A3S2NRX4 A0A2H1VLE3 + More
A0A194QLZ8 A0A194PND0 U4U7R3 N6TQJ6 A0A1Y1N9C0 A0A139WJ53 A0A1W4X2D3 H9IZC1 A0A194Q2F0 A0A194QWN3 A0A2A4JSB8 A0A212EGR5 A0A3S2NM46

Pubmed

19121390 28756777 22118469 26354079 23537049 28004739 + More
18362917 19820115

EMBL

BABH01001804 KZ150058 PZC74280.1 AGBW02012095 OWR45682.1 NWSH01001729 + More
PCG70324.1 RSAL01000113 RVE46969.1 ODYU01003204 SOQ41643.1 KQ461196 KPJ06578.1 KQ459604 KPI92625.1 KB632194 ERL89939.1 APGK01055475 KB741266 ENN71505.1 GEZM01009511 JAV94544.1 KQ971338 KYB27924.1 BABH01014328 KQ459589 KPI97580.1 KQ461103 KPJ09370.1 NWSH01000735 PCG74504.1 AGBW02015043 OWR40675.1 RSAL01000005 RVE54468.1

Proteomes

UP000005204 UP000007151 UP000218220 UP000283053 UP000053240 UP000053268 + More
UP000030742 UP000019118 UP000007266 UP000192223

PRIDE

H9JG13 H9IZC1

Pfam

PF16953 PRORP + More
PF11901 DUF3421

Interpro

IPR033495   MRPP3        + More
IPR011990   TPR-like_helical_dom_sf
IPR031595   PRORP_C
IPR006616   DM9_repeat
IPR024518   DUF3421

Gene 3D

1.25.40.10

ProteinModelPortal

H9JG13 A0A2W1BNH6 A0A212EW15 A0A2A4JFH3 A0A3S2NRX4 A0A2H1VLE3 + More
A0A194QLZ8 A0A194PND0 U4U7R3 N6TQJ6 A0A1Y1N9C0 A0A139WJ53 A0A1W4X2D3 H9IZC1 A0A194Q2F0 A0A194QWN3 A0A2A4JSB8 A0A212EGR5 A0A3S2NM46

KEGG

101741578 no KO assigned | (RefSeq) uncharacterized LOC101741578

GO

GO:0008033 GO:0005739 GO:0016021

PANTHER

PTHR13547:SF1

Length:

243

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.01037

Exp number, first 60 AAs:

0

Total prob of N-in:

0.09052

outside

1 - 243

Pi

167.356987

Theta

142.858329

Tajima's D

0.631284

CLR

15.517699

CSRT

0.556122193890305

Interpretation

Uncertain

Sequence

Summary

Ontologies

Topology

Population Genetic Test Statistics