SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO10851  Validated by peptides from experiments
Pre Gene Modal
BGIBMGA008363
Annotation
PREDICTED:_LOW_QUALITY_PROTEIN:_supporter_of_activation_of_yellow_protein_[Bombyx_mori]
Location
Bomo_Chr18(-):5391155-5410277      View in EpiBrowser
Location in the cell
Nuclear   Reliability : 3.995
 

Sequence

CDS
ATGGAGAGCTCGGAAGATGATGCGGGCCCCGCGACAATCGCTTCCCGCCGTGCATCGGCGCGGGAAAGGGACGTCGGCCAGGCCGAGGACCTCGATGCACCCACTGGCATCTACCAACAAGATCGAACAGAGAGTAGGACGTCGTGCCAAACCCCCGCGATGTCGGAGGATAATTTCGACGGTGACAGCGTACCATCGCCGTCGGTGCAAGACGTCAACACAAGTACCGAAGCGATACTTGACATGATAGATGAAATCGTGGATGGACCAGGCGCACCAAAGCGAATACCTATCGCAAGCGATACTCTTCTGGTCGCTCATGAAATTGCTTCGGAGGATGATTCGGGACTCAGTCAAGAGCTTTTGAATACAAACAGTACTGAGTCTTTAACACCAATTCCAGATGTTTCGCCCGCGCTAGACGTCAATGCCGACGATACAGTTGTAAATAGCTCTGCTACTGAACAACAAATTAGTGCGGAATTAAATATTGCAAGTGTAAATAGTGAAAATATGTGTCAAGAAAGGCTACTCATACCAACAGAAGAGTGTACAACAACTGAAAAAGAGTGTATAGTGTCACAAGTAGAACTTGAGCCTTCAAGCTCACAAACATTGTCAAATATTCCTTCCAGCAGTGCATTTCATGTGCAAAGTGTTTCTGAAACTGTTAGTGAAAGTGAAAAAACAGATAGAACAGTTAAATGTGTCACATCTAGTGAGATTCAGAACAGAATAAGAATAGAATCCGCTGAGTCAACTTCAAGTGATTGTAGTGTTAGTGAGGACAAGATTGCAGAGCCTACAACAAAGGTACCTTTGAGACGAAGGCTTGTGAGGCCAGCCCGTTGTGATCGGCGTTCTGATTGCACAGTATCTTCCAGTGTGGACTTGAAATCTGTTAATATTAATACTATTGTAAGTGTAAGTGAAAATGTACCCAAGGATGTAACTAGTTCTTCAGATTCCAATCAGTCTGTTCATGAAGTTCTGAGACCTGAGGTTAGTGTTTTAAATGAGATTAGTATCAGCAAAATTGAAATTCCGGCAGGTTCTCCTAAAAAAATTAAACTCATTAGGCAAAAACCTGTTTTAAAAGACAAAGAAAGTATTGTTGAGAACCTGCAACAATTTAAAGTGGAGAAGGAGCAATGTCAACCTACATCTTCTGGAACAGTGTTAATAAGTGAAATTACTAAAGATATACCATGTAATTTAGAAACTTCGCAGCCACTAAAATCTACAGATTCATTGAATGTAAACAAATCAGAAGATTGTCCTTCACAAACTAATGATGTTAATGATATTTCATTAGATTCTTGTGAAGCCCAAAAAATACAAAAATCTGAAATAGCAGTGAATATGTTTATAGAAACAAATTTGAATGCTGAACCAAAATATGGATCTGCTCCAGATTTTTTATCCTTCAATGTAAATGATGTGAGAGAAAATGAAAATGACAAAAATGAGAGTGTATCTCTTAATGCAGTGTCTGAGGTACTAACTGGTCTAAGTGAAACCTCATCTAATAAACACAATCAGCTAATTGTGGATGTGGCTTCAACTTCTAACAAAGAAACTTTAAATGCTAAAGTCATACCAAAAGAAAACAGCAGTCTCACACAAGAAGAAAAAATAATAATACCACCTATTAAATTAAATGTATGTTTGCCGGATACAGATATTGCAAATTTAAATGATCAGAACCGGGCAGAAGTTCAAATGGAACACATAGCTGAATTGGAACCATGTAAACAGGTTCCTAAATTAACAATTAAATTAGGAATCAAGCCACCTGAAGAAGTAAAGTCACCAATTCCTAAAGTTACAATAAAATCAATTAGAACAGACGAGCAGTCTTTCTTGAGAGCTGAAGATGAACAAGAAAAACCAACTGTGACAAAATTTAATATCAAACCAATACTTAAACCGCAGAGTGAAATTCATGAAACTTCCTCAAACTATGTTAAAGATGAAGAAAATGATCAACAGATTCTATCTGTAACAAGGCTAAATATTAAGCCAATCCCCAAACCACAGAGTGACCAGAAAAAAACTCATTCTGCTGTTAAAGGTGATCACAAAACAGAAAGTTTACAAATCCCTTCCATAACCAAATTAAACATCAAACCTGTCCTCAAACCACCAGAAAAGATTAATGATTCTCACAGACAATCAAGTAGCAGTGAGATATCAGAATCAGAATACTCTGAAAATGATGAAACAACCAGTACTTCAGATCATGCATCAGCATCTGATCATGGTTCAGAAGATGTTCCAAAAGTAACTATAAGATTGGGAAAAGTTGGTACTGAAAGTGAAGGGAAATTTTATACTGATCAAAACGTACCCAAATTTACAATAAAAAGTTTACAGAACACTGATACTGAAATTCAGGAAACCAACTTAAAATTACTTATAACCAGTCAATCAGATGAAAAGAGACTAGAAAAAATACCTAAGCTAACAATAAAAACAGTTACAAAAACCGATAGTCAACCTTTGAGTCCAAAATTGACAATCAAACCATTAAAATCTCCTGATGGTGCAATAAAAGAAAGTGAAATTCCCAAATTAAAAATTACATCTGAAAGTTATTGTGGGAGTCCTGACTATAAAGACAGTTCACATGTGCCTAAAATTACCATTAAACCCATCACAAAAATGGATGTTGACAGTTCATCTAAAACATTTAAAAAATCTTTTACTAGTGATGTTGCAGAACAAATTCCCATAATAACAAAGTTAAATATTAAACCAGTGTTAAAACTTGATTGTGGAGAAACCTCTAATATTGTAGAAGAAAAAGTTCCTGTTATTTCAAAATTAAATATAAAACCTGTGTTAAAACCTAAAGATAATGATAATATAGATTCTAATGTTGAAAATGTACCTAAAATAACTAAACTAAATATTAAACCAATAAAAAACCCCGAAGAAAATTCTTCAGATGAAAAAGACTGTGATGGATTGAATGCTGATACAAATAAAGATAGTGTACCTGTTGTTACTAAAATTAATATTAAGCCTATAGTTAAACCATTGGAAGAAGATATCTCAAAAGATTCAGAGAACCAATCCTCCGAGACTGGGAACTCAAGTGATGATAATGCAGATCATATACCTGTTGTTACGAAGTTAAACATAAAACCTATTATAAAACCAGCTGACTTTGATGAGAACTCCAGATTGCACAAAACTAATGAACAAAGCATTCCAACTGTAACAAGGCTAAACATAAAACCATTGGTAAAACCAGAAGAAATAAATGCATCTAAGAAAGAGAGCTTGAAAAGTTCTGATTCAAAAGTTTCTAGTGTACCTGTAGTTACTAAGTTAAATATTAAACCTGTAACCAAGTCTGATGTCAATGAAATAGGTCATGATGAAAATAAAGAAGAGGTTTGTAGTAAAAACCCTCCAATAGTTATGAAAATTAACATGAAAGCTGTTGCTGAAACAGCATCTAAAGAAAATGTTAAAGGGGAACACAGCCTTTGCAATAATGTTAATACTCATTTTTCACTTTCTAAACATAGTACAGAGATGTCAGAGAGTAGATCTGAAGGGGACTTTTCAGAAAACCTACTCACCTGTAGTCAAGAGCCATATTCATCTGATAATTCAAAGACTGATCTTGTTCAAAAAGGAAAAATTGAAGAACACAGGGATCTTGGATTGCACAATTGTGTAACAATAAATGTTGACGATGGCCTTTCAAATATCCCTAATATACATTCAAAGAATGAAAATTTATTATTAGACTTGTCAACCCATGATAGCATTGTGAAGCATGTTCCCGTAACATCATCAATTACAACTCAAAGTATCACAAAAGAAAATCACCCAGAACCTAAACAGCAATTTTTGTTCACTGAGAAGCAAGTTTCTCAAAAATTTAATGTCATTTCAACATATGGTGAGCCACCTGTAGGTACCAGTGGTACTTTTAAACAAAAATCAATAGCCTCATCTTTACAAAATTGTACATTATTAAAAAAATTGCTAGAAAATACAAAAGAACCAATTGAAAATATAGAATTATCACACAGAAGTACTGTGAATTGTCTTAGTGCAGATCAACAAGAATCCCAATTAACATTTAGAAAAGATTTCAGTAATTGTAATATTCCCCAAGCTACAACAAAAGGTAATGACAGTGACAGTATTAATTATAATGATAAAAAGAAAATTATTTCAACTCATAGCATCAATATTAATGAAAACAGAAAATTAACTGAAGAAAACATATTTGTGAATCAAGGGATCTGTGAAAAATCTAATGAAAATTTAACTAAGCCATTAGAAATAAGTATATCAGAAAAAGTAGTGACACAAAGCTCTGAACAAGATTCACCAAGAATAATTTTGAAGATAAACAAGACTGATCATGGTCCTTCAGCAAAAATAATTACTGAAGAGACAAAAAGACCTGACTCTCCACATAAAAGCTACATAGAAAATATACAAGAAAAAAGTAGTGAAAAAGAAAGCTCAAAAAGATATACTACAAATAGCAAACGTAGACAAAATACTCCAGATTCACCTACTGTGGCTGTAGGTAAAAGATTACGAAGCTCTAGGATTGTAGAAAGTGTTGAAAAGTCACCAATTATTAAAAGAAATACAGGAAAAAGATCTACATCAGAATCAAGCCCTCCACAAATGAAAGATACTGAAATTTCTATACTAGACAATAAGCGTCTTAAACTAGAGCAGCTCCTGACAAGTAACAAATCTTTAACAATAACACCTGTTGCATCCAAAATATCACCAACGTCTCCTACAAAAAGCATAGAAATCAAACAGTCACCAAGATCTGTTAATCATTCAATACTCAACAATGAAAATTGTGCAAAAAATGGAAATTCTAAATTACACAATATTCTCTCAAATTTACAGGCAAAGCAAATGCAGTCAATTTCATTAATTGATAGTAATAATTCAATAAAATCTGTGATGACTAATCCAGAAGTTATTTCTGATCCGCCAGTAAGTGGTATGGCGGATGTAACCGAATCTGTGAGTGAAAATTGTCATCCCAAAGTTCAGGAGATGTTAATTAATGAGAATTCGGATTTTCGAGATAACAGCATTCCTACCGACGAAGCATCACAGGATCCTCTCGAAGTCGACACTTCTAAGATTTCAGAAAACGTCGCAAACGAGAGCAGCATTGCCATCAGGCCTGAAGAATTCACGCCCCAACCGAAGAAACGAGGTCGACCCCGTAAATTGCCTACCTCGGAAGGAGCCAAACCGGTTACACTCCCAGTGACGGCGTTAGAAGAACGACCGCAACGTTCACTTCGGTTGACGAGGGAGCGTCCTTCAATAGTGACGAAACCGCGAGGAGGGCGAGGACGCGGACGAGGTGGAAGGCGCGCCGAGGCCGAGCCATCGCTAGCTGCCAACCCAACTCATCCTACCGACAACCCTACCGAAGAGATCGATCCCACCAGCTCACGAGTGAAGCTCCCGCGTCTTACTGAGGCACTTGATCGCATGCCAGGAGGATGTGTTACGCCATTGTCGAGTCGCCGACGTGGTTCGGTGGAGCCCGAACCTAAGGTGGTACTCGAAGCGGTGACACTAGATGAGATGACTGTACGGCCAGAGAGCACGCCGGGCCGAGGCCGGGGTTCTCGAGGGGGCCGCACACCGCGCGGTCGCACGCCACGTTCCAGGGCGCGGGGGAGAGGAGGAGGCCGCGGCGCCGTCTATATGAAGGAAACCCTGGGCATTTACGGTCGTGTTTGCGGCCCCGCGACGACCACCGTGCAACTCTTTGAAGAAGAAACATGCATGATGGACGACAACGCAACGCCTGCCAAACCTTCACATCTTCTGGATGAGGATTCACAAAGCTCAATCAAAAGTTTAACAAATGAGAGTAGCAAATTAAAGAAGTCAAAATTTGCAGACTTGTTTGACAGTAATAAGCAATGGACAGCAGCAGATGTGAAGGAATATATTTGGCCACATCCTGGAAATAGTGAACCTCAGGTCATGATGATACAAGAGCAGGTGGCGATGTTCCTTGGCGTGAAGAGCTTCAAAAGAAGATATCCTGAACTAAAACGGAGATCCATCGTTGGTGACGAAAAGGATTATGTTTTAGCAAAAAGATTGGCTACAGAAGCTCTATGCGACTTAGGTATAACAGCAGTGGATGCGAGCGAAGTCTTGGATATCATGCTATCAGATTATCCACATAAGTATGAGGAATATCGTGCATACCAGCGGGAAAGACAACTCACTGAACCAGAAGAGATAGTAACTGAAGTGAAGATGGAAGATAAACTGACAAAAAGTGATGTAAAATCAGAAAAATCTTCTGATCACAAACCGGAAGGACCTAAAATCGACCCTGAGAAGTTGAGACAGGATATGGCGGCTGCAGCGATAGCGTCGGCCAGCGAGTGGAACGCGCGCATGAACGCCAGCCGCAGCGTGGCGTGCGTCGACCTGCAGAGCATGACGGTGCACCGGCGCCGCCCCCCCGCCCCGCGACCCGCGCACCACGTGCGACCCCCCGCCGGCTTCTACCCGCACGCGCTGCTGCCTGGACAGTACCAACACGCCTACAGAATCTATACGCCTGAACAGCTTAGGTACTTCCCACTGAACACAGTACTGGCGGCACCGCCGGCGAGCGTGTCCCCGGAGTGCAGCTCGGAGTCCGAACCGGAGTCGGGCTCGGCCTCTGACTCCAGTGTGCACTCTGACTCACACACGCAACAAGCTAAGCGCAAAAGAGTGAGTAAAGTGAAACGCAGCAGTCAAGCGGAGAAGGAAAAAGAAAAAGAGAAGGAGAAAGAATTAGAACCCGCGGAGGTGGAGGACACGTGCCGCGCGTGCAAGCTGCGCCTCGAGGGGAACAGGAAGCACACGCACGAGCGGTTCCTCGTCTGCGCTACTTGCAACGCGAAACTGCACCCCGGCTGCGTGGAGCTGGGCCCGGACACGATCCGCAAGTGCCGCGAGTACCCGTGGCAGTGCGCCGAGTGCAAGACGTGCGGCCAGTGCAGCCGCCCCGCCGACGACGACAAGATGCTCTTCTGCGACCTCTGCGACCGCGGCTTCCACTCCTACTGTGTCGGCCTACCGGAAGTGCCCACCGGTCGGTGGCACTGCGTGGAGTGCGCCATCTGCAAGTCGTGCGGCGCGCGGTCACCGGCGGGCGCGGCGGCGGCGGGGGGCGCGGCGGGGGACGCGGCCCCCGAGTGGCACCACCAGACCAAGCGCGGCCCCGGCGGACACAAGGTGTACTCGCACTCGCTGTGCACGCCCTGCGCCAGGGCGTATCGCATCGGTCGCTACTGCCCTCTGTGCGATCGCTCGTTCGTCGGGCCCAAGGGGACTATGCAGCTCGTCATATGTAAGCTCTGCGATAGGCAACTGCATCAAGAGTGCGTTAGGACGACGGTGTCGGTGCTGAAGGTGTTGGACTACACGTGCGGCGAGTGCCGGCGCGGCGGGATCACGTCGCGCGCGGCCGCCGTCCGCCTGGCGCCGCGCACTATCGCGACGCTGTTCATGGCCAAGCGACGGTTCAACAAGTACGCGCACCGCCAGTACATGCTCTCGCGCACAGAGCCCGAGCCGGAACCGGACCCGCTCGACGTGGCCGCGCCCTCCGACTAG
Protein
MESSEDDAGPATIASRRASARERDVGQAEDLDAPTGIYQQDRTESRTSCQTPAMSEDNFDGDSVPSPSVQDVNTSTEAILDMIDEIVDGPGAPKRIPIASDTLLVAHEIASEDDSGLSQELLNTNSTESLTPIPDVSPALDVNADDTVVNSSATEQQISAELNIASVNSENMCQERLLIPTEECTTTEKECIVSQVELEPSSSQTLSNIPSSSAFHVQSVSETVSESEKTDRTVKCVTSSEIQNRIRIESAESTSSDCSVSEDKIAEPTTKVPLRRRLVRPARCDRRSDCTVSSSVDLKSVNINTIVSVSENVPKDVTSSSDSNQSVHEVLRPEVSVLNEISISKIEIPAGSPKKIKLIRQKPVLKDKESIVENLQQFKVEKEQCQPTSSGTVLISEITKDIPCNLETSQPLKSTDSLNVNKSEDCPSQTNDVNDISLDSCEAQKIQKSEIAVNMFIETNLNAEPKYGSAPDFLSFNVNDVRENENDKNESVSLNAVSEVLTGLSETSSNKHNQLIVDVASTSNKETLNAKVIPKENSSLTQEEKIIIPPIKLNVCLPDTDIANLNDQNRAEVQMEHIAELEPCKQVPKLTIKLGIKPPEEVKSPIPKVTIKSIRTDEQSFLRAEDEQEKPTVTKFNIKPILKPQSEIHETSSNYVKDEENDQQILSVTRLNIKPIPKPQSDQKKTHSAVKGDHKTESLQIPSITKLNIKPVLKPPEKINDSHRQSSSSEISESEYSENDETTSTSDHASASDHGSEDVPKVTIRLGKVGTESEGKFYTDQNVPKFTIKSLQNTDTEIQETNLKLLITSQSDEKRLEKIPKLTIKTVTKTDSQPLSPKLTIKPLKSPDGAIKESEIPKLKITSESYCGSPDYKDSSHVPKITIKPITKMDVDSSSKTFKKSFTSDVAEQIPIITKLNIKPVLKLDCGETSNIVEEKVPVISKLNIKPVLKPKDNDNIDSNVENVPKITKLNIKPIKNPEENSSDEKDCDGLNADTNKDSVPVVTKINIKPIVKPLEEDISKDSENQSSETGNSSDDNADHIPVVTKLNIKPIIKPADFDENSRLHKTNEQSIPTVTRLNIKPLVKPEEINASKKESLKSSDSKVSSVPVVTKLNIKPVTKSDVNEIGHDENKEEVCSKNPPIVMKINMKAVAETASKENVKGEHSLCNNVNTHFSLSKHSTEMSESRSEGDFSENLLTCSQEPYSSDNSKTDLVQKGKIEEHRDLGLHNCVTINVDDGLSNIPNIHSKNENLLLDLSTHDSIVKHVPVTSSITTQSITKENHPEPKQQFLFTEKQVSQKFNVISTYGEPPVGTSGTFKQKSIASSLQNCTLLKKLLENTKEPIENIELSHRSTVNCLSADQQESQLTFRKDFSNCNIPQATTKGNDSDSINYNDKKKIISTHSININENRKLTEENIFVNQGICEKSNENLTKPLEISISEKVVTQSSEQDSPRIILKINKTDHGPSAKIITEETKRPDSPHKSYIENIQEKSSEKESSKRYTTNSKRRQNTPDSPTVAVGKRLRSSRIVESVEKSPIIKRNTGKRSTSESSPPQMKDTEISILDNKRLKLEQLLTSNKSLTITPVASKISPTSPTKSIEIKQSPRSVNHSILNNENCAKNGNSKLHNILSNLQAKQMQSISLIDSNNSIKSVMTNPEVISDPPVSGMADVTESVSENCHPKVQEMLINENSDFRDNSIPTDEASQDPLEVDTSKISENVANESSIAIRPEEFTPQPKKRGRPRKLPTSEGAKPVTLPVTALEERPQRSLRLTRERPSIVTKPRGGRGRGRGGRRAEAEPSLAANPTHPTDNPTEEIDPTSSRVKLPRLTEALDRMPGGCVTPLSSRRRGSVEPEPKVVLEAVTLDEMTVRPESTPGRGRGSRGGRTPRGRTPRSRARGRGGGRGAVYMKETLGIYGRVCGPATTTVQLFEEETCMMDDNATPAKPSHLLDEDSQSSIKSLTNESSKLKKSKFADLFDSNKQWTAADVKEYIWPHPGNSEPQVMMIQEQVAMFLGVKSFKRRYPELKRRSIVGDEKDYVLAKRLATEALCDLGITAVDASEVLDIMLSDYPHKYEEYRAYQRERQLTEPEEIVTEVKMEDKLTKSDVKSEKSSDHKPEGPKIDPEKLRQDMAAAAIASASEWNARMNASRSVACVDLQSMTVHRRRPPAPRPAHHVRPPAGFYPHALLPGQYQHAYRIYTPEQLRYFPLNTVLAAPPASVSPECSSESEPESGSASDSSVHSDSHTQQAKRKRVSKVKRSSQAEKEKEKEKEKELEPAEVEDTCRACKLRLEGNRKHTHERFLVCATCNAKLHPGCVELGPDTIRKCREYPWQCAECKTCGQCSRPADDDKMLFCDLCDRGFHSYCVGLPEVPTGRWHCVECAICKSCGARSPAGAAAAGGAAGDAAPEWHHQTKRGPGGHKVYSHSLCTPCARAYRIGRYCPLCDRSFVGPKGTMQLVICKLCDRQLHQECVRTTVSVLKVLDYTCGECRRGGITSRAAAVRLAPRTIATLFMAKRRFNKYAHRQYMLSRTEPEPEPDPLDVAAPSD

Summary

Uniprot
A0A2A4JE20  
EMBL
NWSH01001729    PCG70327.1   
Proteomes
UP000218220   
Pfam
PF00628   PHD
Interpro
IPR011011   Znf_FYVE_PHD        + More
IPR013083   Znf_RING/FYVE/PHD       
IPR001965   Znf_PHD       
IPR019787   Znf_PHD-finger       
IPR038045   PHF10       
SUPFAM
SSF57903   SSF57903       
Gene 3D
3.30.40.10    
ProteinModelPortal
A0A2A4JE20  
PDB
5SZC     E-value=1.46432e-16,     Score=218

Ontologies

KEGG
101741306    K22197 BRG1-associated factor 45A | (RefSeq) supporter of activation of yellow protein
GO
GO:0071564   GO:0046872   GO:0005515   GO:0008270   GO:0043565   GO:0003676   GO:0051028   GO:0005622   GO:0006810   GO:0003824  
PANTHER
PTHR10615:SF174  

Topology

Length:
2548
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.0071
Exp number, first 60 AAs:
0
Total prob of N-in:
0.00000
outside
1  -  2548
 
 

Population Genetic Test Statistics

Pi
37.61474
Theta
184.419235
Tajima's D
-1.803132
CLR
527.625757
CSRT
0.0290985450727464
Interpretation
Possibly Positive selection
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