Gene

KWMTBOMO10850

Pre Gene Modal

BGIBMGA008458

Annotation

ATP-binding_domain-containing_protein_4_[Papilio_xuthus]

Location

Bomo_Chr18(+):5384078-5389662      View in EpiBrowser

Location in the cell

PlasmaMembrane   Reliability : 1.801

CDS

ATGAATCATGATGGAGATGAAGAAACAGGGTGCAACATCGGTGATTATAAAGTGGCTATAACGAGAAGATGGAATTATGAAAACACCGTAGCGGCGATTGTATGTAACGTTGCCACAGGCTCATCTCCGTCGACATGTCAACTGTCGTTCCCGAGCGAGGAGGCGTGCAAGTCTCACCGGGTGCGAGCGCGCGCCATGACCACGGAACAACTCGAAGAAGTCTTGGAGTACGCGCTCAATAAGCTGTTAGGTGACTGCAGGGATAAAGACCAAGGGCCCGCCGTCAAAATGAGGATATTCTACCAGGTGTGGAGCGCGCCGGCGGCGGGCTGGGTGGGGCGGCTGCGGCGCGCGGCGGGCGCCCGGCTGGCGCTGACGGCGGTGCCGGTGCTCGCGCTGCACAACGCCTTCACCTTCCTCTCCATCGCCGGGCTGCGGCTCGACGAGTGA

Protein

MNHDGDEETGCNIGDYKVAITRRWNYENTVAAIVCNVATGSSPSTCQLSFPSEEACKSHRVRARAMTTEQLEEVLEYALNKLLGDCRDKDQGPAVKMRIFYQVWSAPAAGWVGRLRRAAGARLALTAVPVLALHNAFTFLSIAGLRLDE

Uniprot

A0A2H1WN34   A0A2A4K8M5   A0A2A4KA83   A0A2W1BKW1   A0A194PND4   S4PBK8   + More
A0A212EW48   A0A0N1IDI4   A0A1B0FHH2   A0A1B0ASU6   A0A1A9UUV9   A0A1A9ZLS4   A0A1A9XYG3   B3NU86   B3MQG4   A0A1W4VZQ6   B4Q1J2   A0A1A9WZF0   B4R381   Q8MRI4   W8AVY3   A0A0L0C252   A0A0K8TRG8   B4L1X3   V9IJR6   B4M8B3   T1PF44   U5EVV8   A0A0A1WQP1   A0A1I8MEF6   A0A0L7RIC0   A0A0M5JDD5   A0A1J1IFH5   A0A2A3EE91   A0A088AM37   A0A0N0U6H4   E2BW99   A0A0C9RVZ3   A0A1I8PJ76   A0A0C9RFE3   A0A1B6D1C8   A0A182F893   A0A182Q7B8   W5JHF7   T1DDZ8   Q16W05   E2AII7   A0A182SC28   A0A1S4FMH1   A0A182XBH5   Q7PYH6   A0A182V4X3   A0A182KLZ0   A0A182RXK7   A0A232EVN6   A0A2M4AJ88   K7J9Q7   A0A182JP80   A0A0J7NZH9   A0A182YQL9   T1HVH9   A0A1Q3EU54   A0A182I0B5   E9J3E0   A0A182TFJ7   A0A2J7PL03   A0A2P8XKQ8   A0A182N617   A0A026WZ14   A0A067RNS0   A0A182PQV7   A0A1B6LU93   A0A182MIM5   A0A182VR22   A0A195B7G6   A0A1B6EUR4   A0A195DWN4   A0A151XD44   F4X133   A0A151ID52   A0A195FNX6  

Pubmed

28756777    26354079    23622113    22118469    17994087    17550304    + More
10731132    12537568    12537572    12537573    12537574    16110336    17569856    17569867    26109357    26109356    24495485    26108605    26369729    18057021    25830018    25315136    20798317    20920257    23761445    24330624    17510324    12364791    14747013    17210077    20966253    28648823    20075255    25244985    21282665    29403074    24508170    30249741    24845553    21719571   

EMBL

ODYU01009812    SOQ54481.1    NWSH01000028    PCG80561.1    PCG80562.1    KZ150058    + More
PZC74274.1    KQ459604    KPI92630.1    GAIX01004571    JAA87989.1    AGBW02012095    OWR45687.1    LADI01011989    KPJ20735.1    CCAG010009884    CCAG010009885    JXJN01003012    CH954180    EDV46001.1    CH902621    EDV44590.1    CM000162    EDX02481.1    CM000366    EDX17683.1    AE014298    AY119604    BT021411    AAF48097.3    AAM50258.1    AAX33559.1    GAMC01013522    GAMC01013521    GAMC01013520    GAMC01013519    JAB93035.1    JRES01000994    KNC26346.1    GDAI01001088    JAI16515.1    CH933810    EDW07694.1    KRF94145.1    KRF94146.1    JR050892    AEY61378.1    CH940653    EDW62389.2    KA646780    AFP61409.1    GANO01000838    JAB59033.1    GBXI01013497    JAD00795.1    KQ414584    KOC70579.1    CP012528    ALC48418.1    CVRI01000048    CRK99013.1    KZ288282    PBC29539.1    KQ435727    KOX77844.1    GL451103    EFN80003.1    GBYB01013125    JAG82892.1    GBYB01007125    JAG76892.1    GEDC01017814    JAS19484.1    AXCN02000193    ADMH02001488    ETN62345.1    GALA01001247    JAA93605.1    CH477578    EAT38760.1    EAT38761.1    GL439791    EFN66777.1    AAAB01008987    EAA01160.5    NNAY01001974    OXU22410.1    GGFK01007538    MBW40859.1    AAZX01005119    LBMM01000679    KMQ97805.1    ACPB03015779    GFDL01016200    JAV18845.1    APCN01002059    GL768061    EFZ12662.1    NEVH01024529    PNF17013.1    PYGN01001843    PSN32554.1    KK107063    QOIP01000005    EZA60991.1    RLU22548.1    KK852559    KDR21389.1    GEBQ01012731    JAT27246.1    AXCM01017117    KQ976574    KYM80144.1    GECZ01028306    JAS41463.1    KQ980204    KYN17251.1    KQ982294    KYQ58296.1    GL888525    EGI59844.1    KQ977985    KYM98334.1    KQ981387    KYN42017.1   

Proteomes

UP000218220    UP000053268    UP000007151    UP000092444    UP000092460    UP000078200    + More
UP000092445    UP000092443    UP000008711    UP000007801    UP000192221    UP000002282    UP000091820    UP000000304    UP000000803    UP000037069    UP000009192    UP000008792    UP000095301    UP000053825    UP000092553    UP000183832    UP000242457    UP000005203    UP000053105    UP000008237    UP000095300    UP000069272    UP000075886    UP000000673    UP000008820    UP000000311    UP000075901    UP000076407    UP000007062    UP000075903    UP000075882    UP000075900    UP000215335    UP000002358    UP000075881    UP000036403    UP000076408    UP000015103    UP000075840    UP000075902    UP000235965    UP000245037    UP000075884    UP000053097    UP000279307    UP000027135    UP000075885    UP000075883    UP000075920    UP000078540    UP000078492    UP000075809    UP000007755    UP000078542    UP000078541   

PRIDE

Q8MRI4   

Pfam

PF01042   Ribonuc_L-PSP        + More
PF01902   Diphthami_syn_2

Interpro

IPR014729   Rossmann-like_a/b/a_fold        + More
IPR006175   YjgF/YER057c/UK114       
IPR002761   Diphthami_syn_dom       
IPR035959   RutC-like_sf       
IPR030662   DPH6/MJ0570       

SUPFAM

SSF55298   SSF55298       

Gene 3D

3.30.1330.40     3.40.50.620    

CDD

cd01994  Alpha_ANH_like_IV

ProteinModelPortal

A0A2H1WN34   A0A2A4K8M5   A0A2A4KA83   A0A2W1BKW1   A0A194PND4   S4PBK8   + More
A0A212EW48   A0A0N1IDI4   A0A1B0FHH2   A0A1B0ASU6   A0A1A9UUV9   A0A1A9ZLS4   A0A1A9XYG3   B3NU86   B3MQG4   A0A1W4VZQ6   B4Q1J2   A0A1A9WZF0   B4R381   Q8MRI4   W8AVY3   A0A0L0C252   A0A0K8TRG8   B4L1X3   V9IJR6   B4M8B3   T1PF44   U5EVV8   A0A0A1WQP1   A0A1I8MEF6   A0A0L7RIC0   A0A0M5JDD5   A0A1J1IFH5   A0A2A3EE91   A0A088AM37   A0A0N0U6H4   E2BW99   A0A0C9RVZ3   A0A1I8PJ76   A0A0C9RFE3   A0A1B6D1C8   A0A182F893   A0A182Q7B8   W5JHF7   T1DDZ8   Q16W05   E2AII7   A0A182SC28   A0A1S4FMH1   A0A182XBH5   Q7PYH6   A0A182V4X3   A0A182KLZ0   A0A182RXK7   A0A232EVN6   A0A2M4AJ88   K7J9Q7   A0A182JP80   A0A0J7NZH9   A0A182YQL9   T1HVH9   A0A1Q3EU54   A0A182I0B5   E9J3E0   A0A182TFJ7   A0A2J7PL03   A0A2P8XKQ8   A0A182N617   A0A026WZ14   A0A067RNS0   A0A182PQV7   A0A1B6LU93   A0A182MIM5   A0A182VR22   A0A195B7G6   A0A1B6EUR4   A0A195DWN4   A0A151XD44   F4X133   A0A151ID52   A0A195FNX6  

KEGG

101741069    K06927 diphthine-ammonia ligase [EC:6.3.1.14] | (RefSeq) diphthine--ammonia ligase

GO

GO:0005524   GO:0016021   GO:0017178   GO:0017183   GO:0016874  

PANTHER

PTHR12196  

Length:

149

Number of predicted TMHs:

1

Exp number of AAs in TMHs:

20.82531

Exp number, first 60 AAs:

0.07119

Total prob of N-in:

0.75026

inside

1  -  122

TMhelix

123  -  145

outside

146  -  149

 

 

Pi

203.067318

Theta

152.313842

Tajima's D

1.254352

CLR

0.122241

CSRT

0.726863656817159

Interpretation

Uncertain