Gene

KWMTBOMO10849

Pre Gene Modal

BGIBMGA008457

Annotation

PREDICTED:_diphthine--ammonia_ligase_[Papilio_xuthus]

Location

Bomo_Chr18(+):5370368-5382652      View in EpiBrowser

Location in the cell

Cytoplasmic   Reliability : 3.232

CDS

ATGAGAACTGTAGCGTTAATAAGTGGTGGCAAAGACAGCTGCTACAACATGTTGCAATGTGTAGGGGCCGGGCACACTATCGTTGCACTGGCGAATCTCCAACCTCTTCATAAAGATGAATTGGACAGTTACATGTATCAATCAGTAGGTCATCATGGCATAGAACTTTATGCTGAAGCAATGGGATTACCTCTTTATAGAGAAATAATAACAGGTACAGCTGTAGATCAAGGAAAAAATTACAAACCCACTGATAATGATGAAGTTGAGGACCTATACAGGTTGCTTTCCAAAGTCAAGGAAGAAATAAATATAGAAGCAGTTGCTGTTGGTGCAATACTATCTGACTACCAAAGAATCAGAGTTGAGAATGTATGTCAACGCTTGGGTCTAGTTTCACTCGCTTATTTATGGAGGCGGAACCAAAAAGAGTTGTTACAGGAAATGATATACTGTGGTATTGATGCGATCATTATAAAGGTGGCAGCTATGGGTCTCGATCCGAGGATACACTTAGGTATGACGATACGCGACATCCAGCCACATTTGCTAGTCATGAAAGAGAAGTACGGGCTCAACATGTGCGGGGAGGGGGGAGAGTACGAAACCTTCACACTCGACTGTCCCCTGTTCAAGAAAAAACTGATCATCGATGAAAAAGAAATGGTTATGCATTCAGACGATCCTGTAGCTCCTGTCGGGTATTTGAACTTGAAATTGCACCTCGAGCCTAAAGAGAACTGCGACGAACCTCTCCAGCTACCTCCAATCATTAAAAACTCGTTAGACTATTTAAACGACTTGAGCGATTCGGTCTTTAGCGACATAAGCGATATCGAATTGAGTGAGACAGAAATAGAGTCTATAGAGAAGTTAGAGAAAGAGGAAAAGATGAAGAACAGTGCCGAACTCAATCCGTTGCTCACTTATTCGCCGGACAAAGAGAACAATTTAGATATTATACACAAGTTAAATGATAGTGCGGAAGTATTAGACAACGGATATGTATACGAACAGACGAACGATGATAGGTCGTCGCACACGATAACGGATCATCGATCGATATACGGGAACAAACATGGATGGTATTTTATTGGAGGGATTGTCGGCGAAGGGATCGACACGAGGGTGGCAACTGAAGATGCGATGAATAAATTAATTAGTTTGTTAGATTCTGAAAGCATGCATCTAACCGATGTGTGCTCCGTCAACATATACATGAGGAATATGGAAGAGTATGCTTCGTTGAATGACGTTTATGTCAAGACGTTTTGCTACCCGAACCCCCCGACGCGTGTCTGCGTACAGTGCCCTCTGCCGAACAACGTAGGACTTATTTTGGATGGGGTGGCGTTCAAATCAAGTAACAACAATACCGAGACTGACGGAGGTAACGTGAAGGTGCGAGAGACTATGCATGTTCAAGGCATTTCGCATTGGGCCCCAGCCAACATCGGACCTTATAGTCAAGCGATTAAGGTGGGTGAAGTAATCGGAACGTGCGGTCAGATAGCGTTAATACCGGGCGTCATGACGCTGGCGGGCGGCGGCGCGCGCAGACAGAGCGCGCTCGCGCTGCGACACCTCACGCGCGTCATACGGGCGGCGCATCCACGGGCGCACATACGTAGCGTCGTACAGGTAATATAG

Protein

MRTVALISGGKDSCYNMLQCVGAGHTIVALANLQPLHKDELDSYMYQSVGHHGIELYAEAMGLPLYREIITGTAVDQGKNYKPTDNDEVEDLYRLLSKVKEEINIEAVAVGAILSDYQRIRVENVCQRLGLVSLAYLWRRNQKELLQEMIYCGIDAIIIKVAAMGLDPRIHLGMTIRDIQPHLLVMKEKYGLNMCGEGGEYETFTLDCPLFKKKLIIDEKEMVMHSDDPVAPVGYLNLKLHLEPKENCDEPLQLPPIIKNSLDYLNDLSDSVFSDISDIELSETEIESIEKLEKEEKMKNSAELNPLLTYSPDKENNLDIIHKLNDSAEVLDNGYVYEQTNDDRSSHTITDHRSIYGNKHGWYFIGGIVGEGIDTRVATEDAMNKLISLLDSESMHLTDVCSVNIYMRNMEEYASLNDVYVKTFCYPNPPTRVCVQCPLPNNVGLILDGVAFKSSNNNTETDGGNVKVRETMHVQGISHWAPANIGPYSQAIKVGEVIGTCGQIALIPGVMTLAGGGARRQSALALRHLTRVIRAAHPRAHIRSVVQVI

Uniprot

H9JG10   A0A2H1WN34   A0A2A4KA83   A0A2W1BKW1   A0A2A4K8M5   A0A212EW48   + More
A0A194PND4   A0A194QNN4   A0A067RNS0   A0A2J7PL03   A0A1J1IFH5   A0A1Q3EU54   A0A084VS41   A0A182J5Q0   A0A154P2F8   K7J9Q7   A0A2A3EE91   A0A088AM37   E2BW99   A0A0K8TRG8   A0A1B6EUR4   A0A2S2PXD6   D2A2B0   A0A232EVN6   A0A1B6HEN6   E2AII7   A0A0T6B8E1   A0A1S3J8G2   A0A087YAW6   A0A1A8UT71   W5N314   A0A1A8ITU1   A0A096LQQ1   A0A1A8RZV3   W5N319   A0A1A8LE73   A0A3B4BG83   K7FL01   V9KG05   A0A397G8J8  

Pubmed

19121390    28756777    22118469    26354079    24845553    24438588    + More
20075255    20798317    26369729    18362917    19820115    28648823    25463417    17381049    24402279   

EMBL

BABH01001793    BABH01001794    ODYU01009812    SOQ54481.1    NWSH01000028    PCG80562.1    + More
KZ150058    PZC74274.1    PCG80561.1    AGBW02012095    OWR45687.1    KQ459604    KPI92630.1    KQ461196    KPJ06585.1    KK852559    KDR21389.1    NEVH01024529    PNF17013.1    CVRI01000048    CRK99013.1    GFDL01016200    JAV18845.1    ATLV01015797    ATLV01015798    KE525036    KFB40785.1    KQ434806    KZC06125.1    AAZX01005119    KZ288282    PBC29539.1    GL451103    EFN80003.1    GDAI01001088    JAI16515.1    GECZ01028306    JAS41463.1    GGMS01000821    MBY70024.1    KQ971338    EFA02050.1    NNAY01001974    OXU22410.1    GECU01034601    GECU01016534    GECU01010007    JAS73105.1    JAS91172.1    JAS97699.1    GL439791    EFN66777.1    LJIG01009227    KRT83502.1    AYCK01001363    AYCK01001364    HAEJ01011112    SBS51569.1    AHAT01019067    AHAT01019068    HAED01014316    SBR00761.1    HAEH01020460    SBS10823.1    HAEF01004797    SBR42179.1    AGCU01150533    AGCU01150534    AGCU01150535    AGCU01150536    AGCU01150537    AGCU01150538    AGCU01150539    AGCU01150540    AGCU01150541    AGCU01150542    JW864292    AFO96809.1    PQFF01000492    RHZ47352.1   

Proteomes

UP000005204    UP000218220    UP000007151    UP000053268    UP000053240    UP000027135    + More
UP000235965    UP000183832    UP000030765    UP000075880    UP000076502    UP000002358    UP000242457    UP000005203    UP000008237    UP000007266    UP000215335    UP000000311    UP000085678    UP000028760    UP000018468    UP000261520    UP000007267    UP000266861   

PRIDE

H9JG10   

Pfam

PF01902   Diphthami_syn_2        + More
PF01042   Ribonuc_L-PSP

Interpro

IPR035959   RutC-like_sf        + More
IPR030662   DPH6/MJ0570       
IPR002761   Diphthami_syn_dom       
IPR014729   Rossmann-like_a/b/a_fold       
IPR006175   YjgF/YER057c/UK114       
IPR002052   DNA_methylase_N6_adenine_CS       

SUPFAM

SSF55298   SSF55298       

Gene 3D

3.30.1330.40     3.40.50.620    

CDD

cd01994  Alpha_ANH_like_IV

ProteinModelPortal

H9JG10   A0A2H1WN34   A0A2A4KA83   A0A2W1BKW1   A0A2A4K8M5   A0A212EW48   + More
A0A194PND4   A0A194QNN4   A0A067RNS0   A0A2J7PL03   A0A1J1IFH5   A0A1Q3EU54   A0A084VS41   A0A182J5Q0   A0A154P2F8   K7J9Q7   A0A2A3EE91   A0A088AM37   E2BW99   A0A0K8TRG8   A0A1B6EUR4   A0A2S2PXD6   D2A2B0   A0A232EVN6   A0A1B6HEN6   E2AII7   A0A0T6B8E1   A0A1S3J8G2   A0A087YAW6   A0A1A8UT71   W5N314   A0A1A8ITU1   A0A096LQQ1   A0A1A8RZV3   W5N319   A0A1A8LE73   A0A3B4BG83   K7FL01   V9KG05   A0A397G8J8  

PDB

3RK1     E-value=1.10151e-29,     Score=325

KEGG

101741069    K06927 diphthine-ammonia ligase [EC:6.3.1.14] | (RefSeq) diphthine--ammonia ligase

GO

GO:0016021   GO:0005524   GO:0016874   GO:0017183   GO:0017178   GO:0008168   GO:0003676  

PANTHER

PTHR12196  

Length:

549

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.92592

Exp number, first 60 AAs:

0.29464

Total prob of N-in:

0.02411

outside

1  -  549

 

 

Pi

255.002548

Theta

174.311801

Tajima's D

0.862318

CLR

0.045017

CSRT

0.619269036548173

Interpretation

Uncertain