Silkworm Genome Informatics Database

Gene

KWMTBOMO10844

Pre Gene Modal

BGIBMGA008368

Annotation

PREDICTED:_uncharacterized_protein_LOC106130462_[Amyelois_transitella]

Location

Bomo_Chr18(-):5221291-5223147 View in EpiBrowser

Location in the cell

Nuclear Reliability : 4.77

CDS

ATGAAAATAACAGTGCGATCGGTTGTGTTTTGTATATTAGGGTTAGCCGTGGCCGATCCAAATGATTCTACTCAAATTGAAAACTATGATCAGAAAACGAAGCAGTATCAATTAGAAGTACCAGGACGAGACTCAATAACTGTTATCGAAGCTCATGATAGACAACCACAGTGGAAGAAGAAATTTGGAATCAAAAGCACAGCGGACGATGCGGAAGTAAAGAACCTTATGACTCATATTATTCATGATTTAGATGGTAACGAACCGAGATGTTACGGACCTTCGTGTCAAGAAGGATACGCAGAAGAAGATGGTTTTGATGAATACGCACTAGGTGAAGACAAATTAAAGGACTTTCGTGACTATCCTCTAGACCGCTTACAGGCTATCACAGCATTAGCAGCCAAATTGAAAAAGGACAAATACAAACACGATCGTTTCTCTCAAATGGAAAGTGGGGAAGAAGACAAAGGTAATGTATTCACAACATGGAATAGACTAAAGGTAAAACAGCATAAGCATCCTTTTGATGACAAAGACGGCTGGGTAACTTTAGAACCTGTAGCTTGGTCTACTAGCAAGATATCTAAGTGGAAGCCTAATATAAAAAAACAAAAGCCCAACCAGTGGACTGAGGACGATAGTCGACTTCCAGACGACGATAGATTTGAATCACATCAAGGCACTGGAAGCAGTTACAATTATCAACAAAAAAGACCCAGCTTAGCGCGTCCAGGTTTTATTAATAACAAGTTACACGTACCTCAAGACTATGAACCGGAATTACCATCCAAACCAACGTTTACAACATGGAGTAAGCCTCAGCAAGCTTCTTATCCTTCTATGTGGGCTCCAGATGATGGACGACGTCCTCATAAGCCGAACTGTGATACGGATGAAAACTATACAAACGATGAAGAAGGATATTATGGAATGTCAGACTCAGTTGTTACTGACAATCGTCCAGCAAATTTCCCTTATGAATACGAAGCTCTACATCAAGCACAAAGTTCAATGCAAAAACGCCCCTTGCGTCGACCAACACAAGTAGTTTATGCAGGTTCCCCAGAGTACGACAGTGATCGTTCCTCAAGACCACCATATAGTGACGGACAGTGGGTTTTGCTTTCTACCACCAAAGGCTATAAGAACAAAAAACGCCAACGTTCGCTGAACTACCCAGCTCCGGAAGACGGTAATGACGTCACAACAATGACGTCCCATCAAGCAGTTGCTTTAACTGTGTTGCCAGTGGACAAAGCACATACAAACATGACAACGTCACACGGTGGATTATTAGAAGTAGAAAAAAGCTTCCAAACTGTCGAGGAGTCTAAGCGAGATTTAGACAAGAAAAACGATTTAGAAGTTGCTGCAACGCAAATAAGGCCAAATAAAAATAGAGCTGTGAGAAGGAAAATTATTCAGAATTCATCTCCTGACAGTTCGACTCTGCTTGCGGCAGTTGGAGCGGGTATGGTGCCAGCAACCATGGCCATGGTTGTACCCATGATGCTGGGACGTCGTCGGAGAAGAAGAGACTCAAGAGAAACGCTTGAAGAATCAATTGACAAGTTTCTACACAAATATCTTTAG

Protein

MKITVRSVVFCILGLAVADPNDSTQIENYDQKTKQYQLEVPGRDSITVIEAHDRQPQWKKKFGIKSTADDAEVKNLMTHIIHDLDGNEPRCYGPSCQEGYAEEDGFDEYALGEDKLKDFRDYPLDRLQAITALAAKLKKDKYKHDRFSQMESGEEDKGNVFTTWNRLKVKQHKHPFDDKDGWVTLEPVAWSTSKISKWKPNIKKQKPNQWTEDDSRLPDDDRFESHQGTGSSYNYQQKRPSLARPGFINNKLHVPQDYEPELPSKPTFTTWSKPQQASYPSMWAPDDGRRPHKPNCDTDENYTNDEEGYYGMSDSVVTDNRPANFPYEYEALHQAQSSMQKRPLRRPTQVVYAGSPEYDSDRSSRPPYSDGQWVLLSTTKGYKNKKRQRSLNYPAPEDGNDVTTMTSHQAVALTVLPVDKAHTNMTTSHGGLLEVEKSFQTVEESKRDLDKKNDLEVAATQIRPNKNRAVRRKIIQNSSPDSSTLLAAVGAGMVPATMAMVVPMMLGRRRRRRDSRETLEESIDKFLHKYL

Uniprot

H9JFS1 A0A2H1VW69 A0A2W1BN24 A0A2A4K9H4 A0A0L7LPG1 A0A194PGW7 + More
A0A194QNN9 A0A212FDB9 A0A0N1IN09 A0A195BXW2 A0A182G8F4 E9IDY4 A0A151X2C4 E2C947 A0A195ET35 F5HK31

Pubmed

19121390 28756777 26227816 26354079 22118469 26483478 + More
21282665 20798317 12364791 14747013 17210077

EMBL

BABH01001783 ODYU01004505 SOQ44454.1 KZ150058 PZC74266.1 NWSH01000028 + More
PCG80564.1 JTDY01000410 KOB77322.1 KQ459604 KPI92636.1 KQ461196 KPJ06590.1 AGBW02009077 OWR51720.1 KQ459427 KPJ01105.1 KQ976398 KYM92783.1 JXUM01007918 KQ560249 KXJ83579.1 GL762556 EFZ21170.1 KQ982585 KYQ54370.1 GL453780 EFN75520.1 KQ981979 KYN31393.1 AAAB01008859 EGK96872.1

Proteomes

UP000005204 UP000218220 UP000037510 UP000053268 UP000053240 UP000007151 + More
UP000078540 UP000069940 UP000249989 UP000075809 UP000008237 UP000078541 UP000007062

PRIDE

H9JFS1

ProteinModelPortal

H9JFS1 A0A2H1VW69 A0A2W1BN24 A0A2A4K9H4 A0A0L7LPG1 A0A194PGW7 + More
A0A194QNN9 A0A212FDB9 A0A0N1IN09 A0A195BXW2 A0A182G8F4 E9IDY4 A0A151X2C4 E2C947 A0A195ET35 F5HK31

KEGG

101740195 no KO assigned | (RefSeq) uncharacterized LOC101740195

GO

GO:0016021

SignalP

Position: 1 - 18, Likelihood: 0.993817

Length:

531

Number of predicted TMHs:

1

Exp number of AAs in TMHs:

22.19978

Exp number, first 60 AAs:

0.02213

Total prob of N-in:

0.00410

outside

1 - 483

TMhelix

484 - 506

inside

507 - 531

Pi

305.081651

Theta

233.285282

Tajima's D

1.232676

CLR

0.119054

CSRT

0.721613919304035

Interpretation

Uncertain

Sequence

Summary

Ontologies

Topology

Population Genetic Test Statistics