Silkworm Genome Informatics Database

Gene

KWMTBOMO10834

Pre Gene Modal

BGIBMGA008375

Annotation

PREDICTED:_uncharacterized_protein_LOC101741673?_partial_[Bombyx_mori]

Location

Bomo_Chr18(-):4468643-4473358 View in EpiBrowser

Location in the cell

PlasmaMembrane Reliability : 2.973

CDS

ATGAGCCCACTGAGTCTCCTTAACGAGTACTATATACCGGACGACCCGGAAAAACAAGAGACGATCCTGCGGAAGCTATCAGCCTACTGCGGCAAGTCTGTCCTCAACTCAACGACAGAAGATACAGAGGCTCCATACAAATGGGACTTCTACCATTCATTCTTCTTCTCTTATACGGTCGTCAGTACTATTGGTTACGGTAACTTGTCCCCGACGACACATTTATCGCGTATTCTTATGATATTCTACGGTCTCTTTGGCATACCCATCAACGGTATTCTACTTGCAAATCTCGGTGAATATTTCGGTCTCCAGCTAATATCAGTATACCGTAAATATAAGAAGAAAAATGAAAAACGAGCCGATAACTTGGACTTTTTCTTCAATAACCTTGGCATGCTCGGGCAGATTTTTCTTTATCTGGTCCCCGGATTTCTGTTCTTCATATTCTTGCCAGCTTGTATTTTCGTCGTGTTTGAAGGCTGGGATTATGTTGCGGCCATATATTACGCCTTTGTCACTCTCACGACGATTGGATTTGGTGACTTGGTTGCAGGAACTGTCAACAATGGTTTCAAGTGGGGTTACTTTTTTACCTACCAGATATTCCTGATAGTCTGGATCACATTTGGACTTGGCTACATCGTGATGTTACTAGGTTTCATTACTAGTGGCATGAGATCAGAACGCATACATAGAATAGAACAGAAGTTTGCCTATCAATTTAAGGCCACGCAGAACAAGATTCTACAAGGATTCACCAAAGACATTTCCGCTCTTAGGAAAATCATAAACGAAGCCAATTTGATCAAAATTAAGCCAATATATGTCGATACAACACCACACATTACGAGAAGTGCCAGCTGTCCAACGTTCACTTTTGACGTTGAACCAAGAGATCCAATCGTGAAACGAAAACGAGCAAATTCTGAAAATATTCAACTTTCTGCCAAAGATATGCTACGAATACAATCAGACACTGATTTACTAGGAATAGACAAAGAAAAGACATTCACAGCTTCTGCTCTCGTAAAACCAGCGGAACTCTTAGCTCGAGTAGTAAACGTACTCGGAGGCTTTGAATCACCTCAGCAAAAGTCTGGTATCAACTTGTTTGATGATGATCATATTTTAGCAAATGAAAAACCACCATTATTTAGCATAGGCCAAGATCTCATTACTAACTCACCAAAGAGAGCTAGGGCGCTCAGCGTGGCTGTACCGAATTACAGAAAAGAATCTTTGGCCACGAAACTAGATCATGATTTCACATGGACTAGCGGAGAATCAGGAGATAAGCTTAGACGAGAAGCTAATATGAGAAGTGGGAAATTATCACTGCCCGCTAAAGTCCCTCATTCAGATTGCTCTCAACCGCAAAGTATTATCTCAAAATTCTTCTTCAGAAAACAAAGTTCAACTGATAATCCGGCCGAATATATCAAAAGCTCTATGAGGGATCGGGTTAACAGTGCACAAGGCAGCACTGAAAGCATTAAAGACAATGGAAAACCTAGGCGTGGAAGTATATTTCCTTCATTTATATTCGGATCGTCTGAAGGAAAAAACGAAGCTGATGCATACAAAGAAAAGACAAAACGAGGGCGCCATAGTATCTTTCCCACTTTTGATTTCCATCGTAGCGAAGAAGATTCTGCAAACGCTTACCTAGAAAAGACTAAGCGTGGTCGTCACAGCATTTTTCCCACATTTGATTTCTCGGAAGACGAAGACTTTGCCGCAATGCGAGCTTACCAACAGAAACCTAAGCGGCACAGTATATTTCCTACTTTTGATTTTAGTGAAGATGAAAATGCATCTGCTGCTAAAGCCTATAAAGAAAAAACGAAACAAGGAAGACGTAGTATTTTCCCTACATTCGATTTTAGCGATCCTGACGATGATATGGCTGAGCGTTATAAAGAAAATACAAGGCGTGGTAGACGCAGCATTTTCCCATCATTCAATTTCAGCGGTCTTACAAGTAATGATGAGGATGATACAGTAGACGAAGATGAAGTGCAGAGATATCAAAACCGTACAAGGAAAGGTCGATTAAGTCTGTTTCCTACTTTCGGCAAGTCCAAGAAGAACGACGACGATAACTTGCCTGAAAGCTCTGACGAACTTGTAGATTATAAAAACAAGACCCGCCGCGGTCGCAGTAGTCTGTTTCCTTCTTTCGGAAAGGAACGTAAAGACAGTGCACAAACAGATGATCCCAGTGATCTCGAAACTAGTATTCGACAATACCAAAAGCAAAGACTGGGACGGAATAGTGCTTTCGACGGAGATGATTCCAGGAATTCTACTCCAGATAGAAGAAACAGTATTTTCTCTAGTGAAATAGAAAATTATAGAAGTAAAACAAGAGGCGGCCGTCCTAGTCTTTTTGACCCAGATGTAAATATTTCAAACTTACCACAATCAGAGCAAGTGGAAGTTTTAGAGCATACTAGTGTTGCTGATTTACTGAGAGCTCTCGCAGCATTAGAGGCAGCTGGTCAAAATCCTTACAGCTCTAATACTGGTGAGCCATCAGGCTTATTAGAAATGATATCTGAACCCTTGTCTGACACATCTAGAAGACGAGGCTCCTTGAGACATGATCTTCAGTCACAAACTCCTCCTGGTTGCGTAGAAGACTGTACTGGTCCACGCCGTCGTCGAATATCAGCTAGAGCGGCTGCTCCTCAATTTACTCCAACGCTGGCAACTGTTGTTGCTGGTACGGAATTACAGTTAAGTACCGCAACAGCTGCTAGAGAAAATCGCATGTCCTTGTTAACTCAGCCTCCACCCCCCTACTCTGAAACTCCTAGTGAAGAAGAGAACAAGCCTCGTCTTAGAAGATATTCCCCTGCGCCTGTACCTAGTGATTCTGGAAGGTCTGCAGGTCCTGTACCGAGACTGTTTTCAAGGATGCGCAAAGAAAGCGCCCCCAATGCGGAGGACGGGGACTCGAGAAGAGGTAGCCTAACCGATATAGTCATTGATAGTTTTAAAGATAAAACGTGA

Protein

MSPLSLLNEYYIPDDPEKQETILRKLSAYCGKSVLNSTTEDTEAPYKWDFYHSFFFSYTVVSTIGYGNLSPTTHLSRILMIFYGLFGIPINGILLANLGEYFGLQLISVYRKYKKKNEKRADNLDFFFNNLGMLGQIFLYLVPGFLFFIFLPACIFVVFEGWDYVAAIYYAFVTLTTIGFGDLVAGTVNNGFKWGYFFTYQIFLIVWITFGLGYIVMLLGFITSGMRSERIHRIEQKFAYQFKATQNKILQGFTKDISALRKIINEANLIKIKPIYVDTTPHITRSASCPTFTFDVEPRDPIVKRKRANSENIQLSAKDMLRIQSDTDLLGIDKEKTFTASALVKPAELLARVVNVLGGFESPQQKSGINLFDDDHILANEKPPLFSIGQDLITNSPKRARALSVAVPNYRKESLATKLDHDFTWTSGESGDKLRREANMRSGKLSLPAKVPHSDCSQPQSIISKFFFRKQSSTDNPAEYIKSSMRDRVNSAQGSTESIKDNGKPRRGSIFPSFIFGSSEGKNEADAYKEKTKRGRHSIFPTFDFHRSEEDSANAYLEKTKRGRHSIFPTFDFSEDEDFAAMRAYQQKPKRHSIFPTFDFSEDENASAAKAYKEKTKQGRRSIFPTFDFSDPDDDMAERYKENTRRGRRSIFPSFNFSGLTSNDEDDTVDEDEVQRYQNRTRKGRLSLFPTFGKSKKNDDDNLPESSDELVDYKNKTRRGRSSLFPSFGKERKDSAQTDDPSDLETSIRQYQKQRLGRNSAFDGDDSRNSTPDRRNSIFSSEIENYRSKTRGGRPSLFDPDVNISNLPQSEQVEVLEHTSVADLLRALAALEAAGQNPYSSNTGEPSGLLEMISEPLSDTSRRRGSLRHDLQSQTPPGCVEDCTGPRRRRISARAAAPQFTPTLATVVAGTELQLSTATAARENRMSLLTQPPPPYSETPSEEENKPRLRRYSPAPVPSDSGRSAGPVPRLFSRMRKESAPNAEDGDSRRGSLTDIVIDSFKDKT

Similarity

Belongs to the two pore domain potassium channel (TC 1.A.1.8) family.

Uniprot

H9JFS8 A0A2H1V551 A0A194PCG0 A0A194QST4 A0A2A4J2Z0 A0A2W1BTX8 + More
A0A3S2NUZ9 A0A212EI93 A0A0L7LSJ2

Pubmed

19121390 26354079 28756777 22118469 26227816

EMBL

BABH01001737 ODYU01000556 SOQ35512.1 KQ459606 KPI90887.1 KQ461196 + More
KPJ06601.1 NWSH01003343 PCG66507.1 KZ149919 PZC77791.1 RSAL01000065 RVE49411.1 AGBW02014677 OWR41206.1 JTDY01000174 KOB78443.1

Proteomes

UP000005204 UP000053268 UP000053240 UP000218220 UP000283053 UP000007151 + More
UP000037510

PRIDE

H9JFS8

Pfam

PF07885 Ion_trans_2

Interpro

IPR013099   K_chnl_dom        + More
IPR003280   2pore_dom_K_chnl
IPR020846   MFS_dom

CDD

cd06174 MFS

ProteinModelPortal

H9JFS8 A0A2H1V551 A0A194PCG0 A0A194QST4 A0A2A4J2Z0 A0A2W1BTX8 + More
A0A3S2NUZ9 A0A212EI93 A0A0L7LSJ2

PDB

4XDL E-value=1.971e-28, Score=317

KEGG

101741673 no KO assigned | (RefSeq) uncharacterized LOC101741673

GO

GO:0005267 GO:0016021 GO:0006811 GO:0016020 GO:0005737 GO:0006406 GO:0000166 GO:0005515 GO:0051028 GO:0005622 GO:0006810 GO:0003824 GO:0071805

Length:

1005

Number of predicted TMHs:

4

Exp number of AAs in TMHs:

103.30414

Exp number, first 60 AAs:

5.22502

Total prob of N-in:

0.40980

outside

1 - 87

TMhelix

88 - 110

inside

111 - 136

TMhelix

137 - 159

outside

160 - 164

TMhelix

165 - 187

inside

188 - 193

TMhelix

194 - 216

outside

217 - 1005

Pi

234.942166

Theta

210.881456

Tajima's D

0.299516

CLR

0.037795

CSRT

0.454077296135193

Interpretation

Uncertain

Sequence

Summary

Ontologies

Topology

Population Genetic Test Statistics