Silkworm Genome Informatics Database

Gene

KWMTBOMO10824

Pre Gene Modal

BGIBMGA008377

Annotation

PREDICTED:_uncharacterized_protein_CG43867_isoform_X6_[Bombyx_mori]

Location

Bomo_Chr18(-):4017039-4022129 View in EpiBrowser

Location in the cell

Nuclear Reliability : 3.814

CDS

ATGTCTGAGGAGAGATCGCGTCGTTTATCGCAGATCTTCGACCCGCTGTCGAGGTTTACCGACCACAGTGGGGCGGGTCAGTCTGCTAGTACACCGAACAGCCCGCGATTGTTGCCGAGGAGATCCCGGGATCCACCGCCGCCGCCACCTAGGCCTCTCGCCCATTCGTCACGTCTGGACCCCCTGGAGTATGAGTTGGCGACGGCACAAGTGGACTCCGTCAATTGGCAAGAGCGATGTCTTGAACTGCAGTTGGAGTTGCACAGGAGCCGACACCAGGCTACCAGAGTACGCGACATGTTGAGAGATAAGATAAAGATCAAATAA

Protein

MSEERSRRLSQIFDPLSRFTDHSGAGQSASTPNSPRLLPRRSRDPPPPPPRPLAHSSRLDPLEYELATAQVDSVNWQERCLELQLELHRSRHQATRVRDMLRDKIKIK

Uniprot

H9JFT0 A0A194PD13 A0A194QSU4 A0A212FEW9 A0A3S2NF10 A0A0L7LIH2 + More
D2A094 A0A1Y1LP69 A0A1Y1LP87 A0A1W4XW93 A0A1W4XL84

Pubmed

19121390 26354079 22118469 26227816 18362917 19820115 + More
28004739

EMBL

BABH01001701 KQ459606 KPI90898.1 KQ461196 KPJ06611.1 AGBW02008890 + More
OWR52291.1 RSAL01000065 RVE49405.1 JTDY01000973 KOB75242.1 KQ971338 EFA02489.1 GEZM01050649 JAV75442.1 GEZM01050647 JAV75443.1

Proteomes

UP000005204 UP000053268 UP000053240 UP000007151 UP000283053 UP000037510 + More
UP000007266 UP000192223

PRIDE

H9JFT0

Pfam

PF00373   FERM_M        + More
PF00169   PH
PF00784   MyTH4

Interpro

IPR000857   MyTH4_dom        + More
IPR019749   Band_41_domain
IPR038185   MyTH4_dom_sf
IPR035963   FERM_2
IPR011993   PH-like_dom_sf
IPR019748   FERM_central
IPR001849   PH_domain
IPR000299   FERM_domain

SUPFAM

SSF47031 SSF47031

Gene 3D

1.25.40.530 2.30.29.30

CDD

cd14473 FERM_B-lobe

ProteinModelPortal

H9JFT0 A0A194PD13 A0A194QSU4 A0A212FEW9 A0A3S2NF10 A0A0L7LIH2 + More
D2A094 A0A1Y1LP69 A0A1Y1LP87 A0A1W4XW93 A0A1W4XL84

KEGG

101741393 no KO assigned | (RefSeq) uncharacterized protein CG43867

GO

GO:0005856

Length:

108

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0

Exp number, first 60 AAs:

0

Total prob of N-in:

0.53072

inside

1 - 108

Pi

250.049076

Theta

165.598788

Tajima's D

1.76709

CLR

0.05215

CSRT

0.846807659617019

Interpretation

Uncertain

Sequence

Summary

Ontologies

Topology

Population Genetic Test Statistics