Gene

KWMTBOMO10821  Validated by peptides from experiments

Pre Gene Modal

BGIBMGA008445

Annotation

PREDICTED:_indole-3-acetaldehyde_oxidase-like_isoform_X2_[Bombyx_mori]

Location

Bomo_Chr18(+):3735675-3739524      View in EpiBrowser

Location in the cell

Cytoplasmic   Reliability : 2.104

CDS

ATGGCGCAACTAGAAAAGTCTTTTGGGTGCTGCACGTGCCGCTGTACTGGATTCCGTCCAATTCTCGAGATAATCAAATCGGTCGCCATTGATGCTCCACCCAAATTAAGTCAGAGACTTAAAGATATAGAAGAAATTAGTACCTGCGCCAAAAAATGTCAAAGAAAATGTTCTGTTAAGAGTGATTGTAGCGATTGGAGTCTACTAGAAGATTCTGGGAGTGTCACGAAGATTGAATTGGACTTTGGGAAGTACAAATTTTATAAAGTATACGAAATCGTTGATATTTTTGATATTTTGAATAGAGAGGGCGTGGATTCTTATATGCTTGTAGATGGAAATACGGGAAAAGGTATTGTAGAAACATTTGAATATGAAAGAGTTCTAATAGATATTAGTGACGTGATGGCACTTAAGACTTTCAAAGTCGACCAAAACCTCATTCTTGGTGCGAACGTGTCGCTTGAAGATTGCATTACCATTTTCACCGAAATATCTAAAACTGAGTCTGACTTTGAATATTTGGATGAAGTCGTCAAGCATTTTGAATTAATTGCACACATACCCGTAAGAAAGATCGCATCTTTAGCAGGTAACTTAATGTACAAACGTGCGTATCCCCAGTATCGATCCGATGTCTTCCTACTGTTTGAATGCTTAGGAGCAGAGATGACAGTTCAAAATAGCAAGGGTAACACATATACTCTGAGATTGGAGGAATTCTTGCACCATGATATGCAGGGAATTGTTATTGTTAATTTCATGCTTCCCCCACTTAACAAAACAACACATCTGTTTAAAAGTTACAAGATAATGCCCCGAAGTCAAAACGCACTGGCTATAGTCAATGCTGCTTTCTTAATGAAGCTGGATTCGAAAAACAATGTTCAAAAAGCATCTATTGTGTATGGGAACATAAGCTCAACATTCGTTCACGCTCTTCACACCGAAGAATATCTGACAGGAAAATGTCCATTTAGCAATGAAACATTGCAAGGAGCTATCAAAGCCCTAGACGGAGAATTGGAAGAAGTTGGCACTTGGACTGTTTTATAA

Protein

MAQLEKSFGCCTCRCTGFRPILEIIKSVAIDAPPKLSQRLKDIEEISTCAKKCQRKCSVKSDCSDWSLLEDSGSVTKIELDFGKYKFYKVYEIVDIFDILNREGVDSYMLVDGNTGKGIVETFEYERVLIDISDVMALKTFKVDQNLILGANVSLEDCITIFTEISKTESDFEYLDEVVKHFELIAHIPVRKIASLAGNLMYKRAYPQYRSDVFLLFECLGAEMTVQNSKGNTYTLRLEEFLHHDMQGIVIVNFMLPPLNKTTHLFKSYKIMPRSQNALAIVNAAFLMKLDSKNNVQKASIVYGNISSTFVHALHTEEYLTGKCPFSNETLQGAIKALDGELEEVGTWTVL

Cofactor

FAD
Mo-molybdopterin
[2Fe-2S] cluster

Uniprot

A0A1U9X1S0   A0A2H1WKN9   A0A2A4KA50   A0A2H1VIZ6   A0A076FRM9   A0A2H1WDE7   + More
A0A0F7QIE0   S5FPI8   A0A0H4TY60   A0A194PCA1   A0A1L8D6P5   A0A194QMP0   A0A212F2C6   A0A1L8D6Y2   A0A2H1VCW8   A0A2A4IRV9   A0A0F7QEA3   A0A0N0PDI7   A0A2A4ITB4   A0A2A4JU78   A0A2W1BIE3   H9JFE7   A0A194QBY5   A0A194PCQ5   A0A3S2PBH0   A0A2W1BJJ3   A0A2H1VZA4   A0A2A4ISI6   A0A2H1VSX5   A0A0N0PF58   A0A2H1VA65   H9JFX1   A0A3S2M0B9   H9JFH1   A0A2W1BG03   A0A2H1V2I4   A0A212FKB8   A0A2A4ITG3   A0A182GN26   A0A0F7QJV6   A0A3S2NMY0   A0A194PDB3   A0A1Q3FSG4   A0A2A4JY06   B0X3W2   A0A2A4JUF7   B0X3X6   A0A0N0PD45   A0A194QUG5   A0A194PE80   A0A1S4FQ35   A0A0H4TD12   A0A2H1V7P8   A0A0N1IAK3   A8TUB4   A0A336MA50   A0A3S2P6B3   A0A1X9ZM11   A0A2H1VH28   A0A2A4JXM9   H9JFZ2   A0A1X9ZM23   A0A0L7L4E9   Q16T47   A0A2A4JYR8   B0X3W3   A0A076FX80   A0A194PIT3   A0A2H1VA49   A0A2W1BHI1   A0A182SE33   A0A2H1V178   A8TUC0   A0A1X9ZM28   A0A1S4FQ36   Q16T46   A0A0F7QEA1   A0A1L8D6Q4   A0A0K8S7B1   A0A2A4JX39   A0A0L7L3S0   A0A0K8S633   A0A240PL19   A0A182YKY2   A0A2H1V6B6   A0A067QY40   A0A194QM53   A0A240PKA6   A0A182MDD7   A0A182QVB6   A0A212F791   A0A212FI14   A0A182XMX6   Q7Q6W3   A0A182VCA4   A0A182JFA6   Q7PNR2   A0A182PHL6   A0A076FRA1  

Pubmed

24817326    25803580    23826341    26778204    26354079    22118469    + More
28756777    19121390    26483478    17904312    26227816    17510324    25244985    24845553    12364791    14747013    17210077   

EMBL

KY643683    AQY62686.1    ODYU01009314    SOQ53643.1    NWSH01000022    PCG80663.1    + More
ODYU01002835    SOQ40809.1    KF960796    AII21998.1    ODYU01007852    SOQ50986.1    LC017754    BAR64768.1    KC952900    AGQ43599.1    KP899547    AKQ06146.1    KQ459606    KPI90901.1    GEYN01000003    JAV02126.1    KQ461196    KPJ06614.1    AGBW02010767    OWR47879.1    GEYN01000002    JAV02127.1    ODYU01001878    SOQ38698.1    NWSH01007964    PCG62737.1    LC017757    BAR64771.1    KQ460326    KPJ15692.1    PCG62736.1    NWSH01000648    PCG75033.1    KZ150135    PZC72997.1    BABH01034979    BABH01034980    BABH01034981    KQ459193    KPJ03063.1    KPI90997.1    RSAL01000123    RVE46648.1    PZC72996.1    ODYU01005369    SOQ46133.1    PCG62735.1    ODYU01004253    SOQ43930.1    KQ459674    KPJ20482.1    ODYU01001481    SOQ37735.1    BABH01001558    RSAL01000088    RVE48203.1    BABH01034958    BABH01034959    BABH01034960    BABH01034961    BABH01034962    BABH01034963    BABH01034964    BABH01034965    KZ150165    PZC72655.1    ODYU01000376    SOQ35055.1    AGBW02008082    OWR54176.1    NWSH01007172    PCG63055.1    JXUM01014357    JXUM01014358    JXUM01014359    KQ560401    KXJ82608.1    LC017753    BAR64767.1    RSAL01000229    RVE43893.1    KPI90998.1    GFDL01004496    JAV30549.1    NWSH01000413    PCG76558.1    DS232324    EDS40039.1    PCG75032.1    EDS40053.1    KPJ15694.1    KQ461154    KPJ08620.1    KPI90999.1    KP899546    AKQ06145.1    ODYU01001109    SOQ36868.1    KPJ15693.1    EU073423    ABW71271.1    UFQS01000745    UFQT01000745    SSX06553.1    SSX26900.1    RSAL01000295    RVE42846.1    KY595781    ARS46835.1    ODYU01002537    SOQ40155.1    PCG76559.1    BABH01001657    BABH01001658    BABH01001659    BABH01001660    KY595779    ARS46833.1    JTDY01003022    KOB70290.1    CH477659    EAT37662.1    PCG76560.1    EDS40040.1    KF960794    AII21996.1    KPI91000.1    ODYU01001472    SOQ37709.1    PZC72657.1    ODYU01000207    SOQ34598.1    EU073424    ABW71272.1    KY595780    ARS46834.1    EAT37663.1    LC017752    BAR64766.1    GEYN01000001    JAV02128.1    GBRD01017212    JAG48615.1    PCG76561.1    JTDY01003126    KOB70107.1    GBRD01017213    JAG48614.1    ODYU01000882    SOQ36316.1    KK852888    KDR14320.1    KPJ06623.1    AXCM01005824    AXCN02000553    AGBW02009901    OWR49607.1    AGBW02008446    OWR53382.1    AAAB01008960    EAA11752.3    EAA11737.5    KF960795    AII21997.1   

Proteomes

UP000218220    UP000053268    UP000053240    UP000007151    UP000005204    UP000283053    + More
UP000069940    UP000249989    UP000002320    UP000037510    UP000008820    UP000075901    UP000075885    UP000076408    UP000027135    UP000075883    UP000075886    UP000076407    UP000007062    UP000075903    UP000075880   

PRIDE

H9JFE7    H9JFX1    H9JFH1    A8TUB4    H9JFZ2    A8TUC0    + More

Pfam

PF02738   Ald_Xan_dh_C2        + More
PF03450   CO_deh_flav_C
PF01315   Ald_Xan_dh_C
PF01799   Fer2_2
PF00941   FAD_binding_5
PF00111   Fer2
PF01130   CD36
PF00271   Helicase_C

Interpro

IPR002888   2Fe-2S-bd        + More
IPR016208   Ald_Oxase/xanthine_DH       
IPR000674   Ald_Oxase/Xan_DH_a/b       
IPR036318   FAD-bd_PCMH-like_sf       
IPR036884   2Fe-2S-bd_dom_sf       
IPR005107   CO_DH_flav_C       
IPR008274   AldOxase/xan_DH_Mopterin-bd       
IPR001041   2Fe-2S_ferredoxin-type       
IPR036010   2Fe-2S_ferredoxin-like_sf       
IPR036683   CO_DH_flav_C_dom_sf       
IPR006058   2Fe2S_fd_BS       
IPR016166   FAD-bd_PCMH       
IPR002346   Mopterin_DH_FAD-bd       
IPR037165   AldOxase/xan_DH_Mopterin-bd_sf       
IPR036856   Ald_Oxase/Xan_DH_a/b_sf       
IPR016169   FAD-bd_PCMH_sub2       
IPR012675   Beta-grasp_dom_sf       
IPR002159   CD36_fam       
IPR027417   P-loop_NTPase       
IPR002464   DNA/RNA_helicase_DEAH_CS       
IPR014001   Helicase_ATP-bd       
IPR001650   Helicase_C       

SUPFAM

SSF47741   SSF47741        + More
SSF56003   SSF56003       
SSF56176   SSF56176       
SSF55447   SSF55447       
SSF54292   SSF54292       
SSF54665   SSF54665       
SSF52540   SSF52540       

Gene 3D

3.30.465.10     3.10.20.30    

CDD

cd00207  fer2
cd00079  HELICc

ProteinModelPortal

A0A1U9X1S0   A0A2H1WKN9   A0A2A4KA50   A0A2H1VIZ6   A0A076FRM9   A0A2H1WDE7   + More
A0A0F7QIE0   S5FPI8   A0A0H4TY60   A0A194PCA1   A0A1L8D6P5   A0A194QMP0   A0A212F2C6   A0A1L8D6Y2   A0A2H1VCW8   A0A2A4IRV9   A0A0F7QEA3   A0A0N0PDI7   A0A2A4ITB4   A0A2A4JU78   A0A2W1BIE3   H9JFE7   A0A194QBY5   A0A194PCQ5   A0A3S2PBH0   A0A2W1BJJ3   A0A2H1VZA4   A0A2A4ISI6   A0A2H1VSX5   A0A0N0PF58   A0A2H1VA65   H9JFX1   A0A3S2M0B9   H9JFH1   A0A2W1BG03   A0A2H1V2I4   A0A212FKB8   A0A2A4ITG3   A0A182GN26   A0A0F7QJV6   A0A3S2NMY0   A0A194PDB3   A0A1Q3FSG4   A0A2A4JY06   B0X3W2   A0A2A4JUF7   B0X3X6   A0A0N0PD45   A0A194QUG5   A0A194PE80   A0A1S4FQ35   A0A0H4TD12   A0A2H1V7P8   A0A0N1IAK3   A8TUB4   A0A336MA50   A0A3S2P6B3   A0A1X9ZM11   A0A2H1VH28   A0A2A4JXM9   H9JFZ2   A0A1X9ZM23   A0A0L7L4E9   Q16T47   A0A2A4JYR8   B0X3W3   A0A076FX80   A0A194PIT3   A0A2H1VA49   A0A2W1BHI1   A0A182SE33   A0A2H1V178   A8TUC0   A0A1X9ZM28   A0A1S4FQ36   Q16T46   A0A0F7QEA1   A0A1L8D6Q4   A0A0K8S7B1   A0A2A4JX39   A0A0L7L3S0   A0A0K8S633   A0A240PL19   A0A182YKY2   A0A2H1V6B6   A0A067QY40   A0A194QM53   A0A240PKA6   A0A182MDD7   A0A182QVB6   A0A212F791   A0A212FI14   A0A182XMX6   Q7Q6W3   A0A182VCA4   A0A182JFA6   Q7PNR2   A0A182PHL6   A0A076FRA1  

PDB

3ZYV     E-value=2.98865e-07,     Score=130

KEGG

101741112    K00106 xanthine dehydrogenase/oxidase [EC:1.17.1.4 1.17.3.2] | (RefSeq) xanthine dehydrogenase/oxida

GO

GO:0102797   GO:0009055   GO:0004031   GO:0071949   GO:0102798   GO:0005506   GO:0051537   GO:0046872   GO:0016491   GO:0016021   GO:0051536   GO:0009115   GO:0004854   GO:0005829   GO:0050660   GO:0003824   GO:0016614   GO:0009374   GO:0003677   GO:0004075   GO:0055114  

Length:

351

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.02079

Exp number, first 60 AAs:

0.00024

Total prob of N-in:

0.00814

outside

1  -  351

 

 

Pi

205.944264

Theta

178.377711

Tajima's D

0.393978

CLR

0.474132

CSRT

0.479126043697815

Interpretation

Uncertain