SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO10806
Annotation
PREDICTED:_uncharacterized_protein_LOC101737207_isoform_X2_[Bombyx_mori]
Location in the cell
PlasmaMembrane   Reliability : 4.746
 

Sequence

CDS
ATGGGTTTGCTTTTTTGTGGCTACCTAAAATTGGTCTCGGCCGTGGTCCTCATTGGAACAGCTTTTATGCCGTTGGCGTGGATGGTTGTAATGCTTAAAATGGAAAATGGATTTGACGTAGTAACGTTATTGATTGTCATACTGTCAATAGCGGTATTAGTGACAGATTTAGTTTTTAGTATAGTCTTCATTGTTTCTGCTCATAAGAAAAGCAGGAAAGCAATGCAGGCCTATTATTATTACATGATAGGTTTGTTAGTGGCCTTAACAATACTCTTCGTTTTGTTTATTATACTCTTCATGGTGTCCTTAAACCATTGGTATGATAATGATTTAATTATATCCACATCTGTGGTCTACATTCTTGATACTAGTTTGCATTGCTACTTGACAATGCTAGTAAGGAGTGGCGTTTACAAGTTTGAAAATGACTTCAATTTTCGCTACATCAGGAATATTGATGTAGATCCGGTGTGCGTCATGGAATCTTGA
Protein
MGLLFCGYLKLVSAVVLIGTAFMPLAWMVVMLKMENGFDVVTLLIVILSIAVLVTDLVFSIVFIVSAHKKSRKAMQAYYYYMIGLLVALTILFVLFIILFMVSLNHWYDNDLIISTSVVYILDTSLHCYLTMLVRSGVYKFENDFNFRYIRNIDVDPVCVMES

Summary

Ontologies

Topology

Length:
163
Number of predicted TMHs:
4
Exp number of AAs in TMHs:
89.08119
Exp number, first 60 AAs:
39.87497
Total prob of N-in:
0.99869
POSSIBLE N-term signal
sequence
inside
1  -  6
TMhelix
7  -  29
outside
30  -  43
TMhelix
44  -  66
inside
67  -  78
TMhelix
79  -  101
outside
102  -  115
TMhelix
116  -  138
inside
139  -  163
 
 

Population Genetic Test Statistics

Pi
141.826258
Theta
131.750511
Tajima's D
0.449614
CLR
4.248071
CSRT
0.497175141242938
Interpretation
Uncertain
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