SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO10805
Annotation
PREDICTED:_uncharacterized_protein_LOC101744800_[Bombyx_mori]
Location in the cell
PlasmaMembrane   Reliability : 4.923
 

Sequence

CDS
ATGCGTCTAGAAATACCTGAATTAACGAGATGCTGTTTTTTTGTACCACTCCGATACGGCATTATGATATTTGGTTATTTAAATTTGCTGTTTGCAGGTTTCATATGCGGTGCATACATACATTATTTGAACAAGAATGCCGAGAATGTTACCATGATAAGTGATGTTATTATCATATACAAAGGCGTGGGTTTCTTTGCGCATGTATGGTTGACATTTTTCTTGTATTTCGTTGAAGTCATATTCTGTGGTATATTACTCGTTGGAGTCCATATGAAACGTCCGTTCTTAATCCAATTATTTTATTACTACTCAATAGCAACAATTTTGGCTAGTATCGCCATTTTTATAATAGATATCTCAATAAATACTCCTATGCAATTCATTCCTTTGGACTATGCTACTATATTCTGTGGATTTGTGATACAAATATATTTGATTCTCCTAGTGCGGAGTGAATTATCTAAGTTGCGGTATCACGGAGACATTAATTATGTGAATCATGTACCAAATATAGAGGTCCAACTCAACAGAGGCGAAGGACCTTCATGA
Protein
MRLEIPELTRCCFFVPLRYGIMIFGYLNLLFAGFICGAYIHYLNKNAENVTMISDVIIIYKGVGFFAHVWLTFFLYFVEVIFCGILLVGVHMKRPFLIQLFYYYSIATILASIAIFIIDISINTPMQFIPLDYATIFCGFVIQIYLILLVRSELSKLRYHGDINYVNHVPNIEVQLNRGEGPS

Summary

Ontologies

Topology

Length:
183
Number of predicted TMHs:
4
Exp number of AAs in TMHs:
90.25195
Exp number, first 60 AAs:
23.23053
Total prob of N-in:
0.99654
POSSIBLE N-term signal
sequence
inside
1  -  20
TMhelix
21  -  43
outside
44  -  66
TMhelix
67  -  89
inside
90  -  95
TMhelix
96  -  118
outside
119  -  127
TMhelix
128  -  150
inside
151  -  183
 
 

Population Genetic Test Statistics

Pi
194.689062
Theta
13.143701
Tajima's D
1.592636
CLR
0.08541
CSRT
0.818909054547273
Interpretation
Uncertain
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