SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO10785
Pre Gene Modal
BGIBMGA008389
Annotation
Inhibitor_of_nuclear_factor_kappa_B_kinase_beta_subunit_[Operophtera_brumata]
Location in the cell
Nuclear   Reliability : 3.367
 

Sequence

CDS
ATGAACGATATAGTGTTCGTTGGCGATTGGATTAAAGACAGAGTACTGGGATCAGGCAGCTTTGGGACAGTAGTGCTGTGGAAACATAAAAAGACCGAAGAGAAACTCGCCATCAAAACTTGTAAATGGGGCGATGAACTCACTGACAAACACAGAGACAGGTGGACGAAGGAGGTTGAAATGTTGCAAAGCTGCCGAAATCCAAACATCGTTGGATCGAAACCCCTTCCATCTGAATTTATAAAGGGCTTAGAGCGAGGCAATCCTTCAGGTCTACCTATAATGTGTATGGAATACTGCAGCGGAGGTGATCTTAGGCAGCAATTGAATAAACCCGAATCATGTTCTGGACTGCGAGAAATACAAGTTCGTCAGATTCTCAGCGATATCAGAAATGCAATGAAGTTCTTACATCAAAAGAAAATAACTCACCGTGATCTAAAACCAGAAAATATTGTTATGAATATTGTAGAGAATACAGAGCAAAACAATATTTCTCCTCAAACTGAACCAAGAGTCATATACAAACTGATAGATCTAGGTTATGCGAAGGAGATTGACTTTAATTCCGTGTGTGCCAGCTTTGTTGGTACTCTTCAATATTTAGCACCAGAGCTACTGTACAGTAAAACATATAGCAATTCTGTTGACTTTTGGTCATTTGGTTTGCTTGCTTTTGAAATAATTTGTGGGAAAAGGCCTTTCCTTCCATTCATGTCTCCTGCACAGTGGATGCCTCACGTTGAAAAGAAAACACATGAAAATATTTGTGTTTATGAAACTTTTCATGGAGATATTGAATATTCAAACAATATATTTCCTGAAAATCATATGTCAGCACCTTTTAAAGTATTAATGGAAGATTGGCTTAGAATAGCTCTGGAATGGGATCCTAAACTGAGAGGCAGAGATTCTCATACAAGAGTCAGATTTAATATTCCTACTGAGCAAAGAGAAGTAAGCAGTAACATCATCATTTATGACCTACTGGAAAATATTTTATCTCGGAAGATAATAAAAATATTTTCTGTACCTACTCTGTCACGACTAGCATACCAAATCAATGATACTACAATGGTTTCTGATTTGAAGAAATGGATTGGGCAAGATACAAGTATGGATATAGCAGACTTAATCTTGATATGTCCAAATACTTTTACAGAACTTGGAGAAATGGACATTGTGTCAAACTATTGGAGAGAACACTGTAACACAATGGTATACTTGTTCAATAAAACATACATTCTTCAGAAGAACATAGAACCAGAAGTGCCAAAATCAGTACAAAGATGCTTGGAGCATCCTAAAGCTTTGTACAATCACAAAAATAGCCAAACTTTATATAAGAATAGCTTGTATTTTGTAAAGAATCAATCTGAAATTTATGAATCACTCATTAATGGGTTACTTGTTAGAGGCGAATCACTAAAAAATGAGGGCAAACAATTGCTACTAAAACATAATGCAGTTGATAAAAGTATAAGTAATCTTCTAGCAAAGGAAGAAATAATGAAAAGGCTGATTGAAACTGGTAAGGAGCAAGTAAACAAATTAAGAGACAGTGGAAAGGGCATAAACATGCTTGGAGGTTTCAACAAAACATTCCAAGACACAGATGAGCATTTCCTAAAAATCAGTAAACTCCAACAAGCCTGGAATCAATTGTCTGTTAGACTCACATCTGCTAAACGACGTTGTAATGAAATTGTGTCAGATGATATAAAAAACTTTGTAGCCAAATATAATTACCAAGCAGTTTATGCCAATGCATTCAAAATATACATTATGGCAAGGAAAAGTGAAATTATCGGAAAAGAAAAACACTGTGATGACATTATGAAAATTTGCTACAACTGTCTCAAATTGAGAAGTAAAATATTGCTTGAAATTCATCACCAGCCCTTTGTTGTGAAGCTGATGGATTTGGGTACTGAATTTTCCAAGATATCCGACATTGTGACCAAGGCTGCAGAAAACACAGAAAAATTAACCAAAGACCTCAGTGATTACATTGATGACCTGAATAATTGTATATGGTCCACCATAAACTTGGCAGTTAGTGATGGGGATAACTTGGCAGATATTCCATACAGTGTGGTGTCTTTTGAAAAAAAAGACTTCAAAATTGGTGGACCAGTTTCAAAACACTGCCAGAAATTAAAAACTACAATACCAAATGATGATAAATTGAAATCTCTAATAGAAGATAGTTTAAAATTACGATTGAATCAAGTAAATTTGTCTGCTGAGGTAAATTCACAGAGAGAATTGTTAAAAACTACAATTTTTGATTTTAGTTTTCTTAATGAATGTAAAGAATAG
Protein
MNDIVFVGDWIKDRVLGSGSFGTVVLWKHKKTEEKLAIKTCKWGDELTDKHRDRWTKEVEMLQSCRNPNIVGSKPLPSEFIKGLERGNPSGLPIMCMEYCSGGDLRQQLNKPESCSGLREIQVRQILSDIRNAMKFLHQKKITHRDLKPENIVMNIVENTEQNNISPQTEPRVIYKLIDLGYAKEIDFNSVCASFVGTLQYLAPELLYSKTYSNSVDFWSFGLLAFEIICGKRPFLPFMSPAQWMPHVEKKTHENICVYETFHGDIEYSNNIFPENHMSAPFKVLMEDWLRIALEWDPKLRGRDSHTRVRFNIPTEQREVSSNIIIYDLLENILSRKIIKIFSVPTLSRLAYQINDTTMVSDLKKWIGQDTSMDIADLILICPNTFTELGEMDIVSNYWREHCNTMVYLFNKTYILQKNIEPEVPKSVQRCLEHPKALYNHKNSQTLYKNSLYFVKNQSEIYESLINGLLVRGESLKNEGKQLLLKHNAVDKSISNLLAKEEIMKRLIETGKEQVNKLRDSGKGINMLGGFNKTFQDTDEHFLKISKLQQAWNQLSVRLTSAKRRCNEIVSDDIKNFVAKYNYQAVYANAFKIYIMARKSEIIGKEKHCDDIMKICYNCLKLRSKILLEIHHQPFVVKLMDLGTEFSKISDIVTKAAENTEKLTKDLSDYIDDLNNCIWSTINLAVSDGDNLADIPYSVVSFEKKDFKIGGPVSKHCQKLKTTIPNDDKLKSLIEDSLKLRLNQVNLSAEVNSQRELLKTTIFDFSFLNECKE

Summary

EMBL
BABH01001603    JTDY01002746    KOB70799.1    NWSH01003334    PCG66530.1    ODYU01006164    + More
SOQ47778.1    KQ460556    KPJ14004.1    KQ459606    KPI90926.1    KK853183    KDR10135.1    GECU01018252    JAS89454.1    NEVH01013204    PNF29865.1    GFDF01007120    JAV06964.1    GFDF01007119    JAV06965.1    MF374338    AVI10168.1    GDRN01081265    JAI62048.1    GANO01002876    JAB56995.1    AJVK01065486    JXUM01097358    JXUM01097359    KQ564337    KXJ72408.1    JN180642    AEK86518.1    GAPW01000247    JAC13351.1    UFQT01000118    SSX20400.1    CH477267    EAT45468.1    GEDC01011942    JAS25356.1    GGFK01002970    MBW36291.1    ADMH02001355    ETN62893.1    GGFK01002981    MBW36302.1    AXCN02000829    GFDL01008684    JAV26361.1    GFDL01008641    JAV26404.1    GGFK01003046    MBW36367.1    DS232456    EDS42051.1    GGFK01002961    MBW36282.1    GGFJ01002186    MBW51327.1    GGFJ01002185    MBW51326.1    AXCM01014086    ATLV01014631    KE524975    KFB39305.1    GEZM01046260    JAV77376.1    GEZM01046266    JAV77372.1    KP274254    AJC98338.1    KP274250    AJC98334.1    KP274243    AJC98327.1    KP274262    AJC98346.1    KP274259    AJC98343.1    KP274251    AJC98335.1    KP274260    AJC98344.1    AAAB01008984    EAL39059.3    KP274258    AJC98342.1    KP274263    AJC98347.1    APCN01003784    KP274249    AJC98333.1    KP274246    AJC98330.1    KP274257    AJC98341.1    KP274244    AJC98328.1    KP274247    AJC98331.1    KP274255    AJC98339.1    KP274252    AJC98336.1    KP274253    AJC98337.1    KP274261    AJC98345.1    KP274245    AJC98329.1    KP274256    AJC98340.1    KP274248    AJC98332.1    JXUM01141228    KQ569208    KXJ68723.1    GBBI01005007    JAC13705.1    NEDP02004497    OWF45490.1   
Pfam
PF00069   Pkinase        + More
PF18397   IKBKB_SDD
Interpro
IPR000719   Prot_kinase_dom        + More
IPR011009   Kinase-like_dom_sf       
IPR008271   Ser/Thr_kinase_AS       
IPR029071   Ubiquitin-like_domsf       
IPR041185   IKBKB_SDD       
SUPFAM
SSF56112   SSF56112        + More
SSF54236   SSF54236       
PDB
3QA8     E-value=1.04546e-80,     Score=767

Ontologies

Topology

Length:
773
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.01647
Exp number, first 60 AAs:
0.00221
Total prob of N-in:
0.00075
outside
1  -  773
 
 

Population Genetic Test Statistics

Pi
275.707601
Theta
237.513578
Tajima's D
0.528743
CLR
0.005114
CSRT
0.520173991300435
Interpretation
Uncertain
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