SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO10770
Annotation
PREDICTED:_cuticle_protein_16.5?_isoform_A_[Bombyx_mori]
Location in the cell
Extracellular   Reliability : 1.011 Nuclear   Reliability : 1.023 PlasmaMembrane   Reliability : 1.414
 

Sequence

CDS
ATGAAGAGCCTTATTCTATTCGCCATTTTGACCGTAGCAGCCGCCAAACCTAAGCCAGGTGGTCTGTCCTATGACCCTTGGGGCGCTGGCTTGTCATCATATGGCGCGTTCCATCAACCCTCGATATCAGTAGCTCAGCCAGTTGCTGTAGCTCAGCATGTAGCCGTGGCTCAACCCGTATACCACGCCGCACCAGCTGTAGCTGTAGCTAAGCCTGCCGCCACAAGCTACTCTTCATTCCAGCAGGTCGTTCACCCAGTTTCCGTAGCGCAGCCAGTTGTCCACGCTGCTCCAGCAGTGGTAGCTCAGCCCGTGGTCCACGCAGCCCCAGCAGTGGTTCACGCCGCGCCAGCTGTAGTAGCTCAGCCTGTAGTTCACGCCGCCCCAGCCATCCAGACCTTCGCCCAACCAGTAGTTTCCAAATATGTCTCCGTTGGCTCATATGGTAGTTACGGCGGTGGGTATGGCGGTGGGTATGGCGGTGGCTACGGCGGTGGCTTCGGAGGCTATGGTCACGGATGGTAA
Protein
MKSLILFAILTVAAAKPKPGGLSYDPWGAGLSSYGAFHQPSISVAQPVAVAQHVAVAQPVYHAAPAVAVAKPAATSYSSFQQVVHPVSVAQPVVHAAPAVVAQPVVHAAPAVVHAAPAVVAQPVVHAAPAIQTFAQPVVSKYVSVGSYGSYGGGYGGGYGGGYGGGFGGYGHGW

Summary

Uniprot
ProteinModelPortal

Ontologies

GO

Topology

SignalP
Position:   1 - 15,         Likelihood:  0.988201
 
 
Length:
174
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.98164
Exp number, first 60 AAs:
0.01326
Total prob of N-in:
0.04127
outside
1  -  174
 
 

Population Genetic Test Statistics

Pi
209.051522
Theta
25.443464
Tajima's D
0.632434
CLR
0.346139
CSRT
0.553022348882556
Interpretation
Uncertain
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