SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO10769
Annotation
putative_cuticle_protein_CPH42_[Bombyx_mori]
Location in the cell
PlasmaMembrane   Reliability : 1.476
 

Sequence

CDS
ATGAAGGCTTTCATTGCAGTTCTTTTCGTGGTTGCCTCGGTTCTGGGCGACCCTGAACCCAGTAAAACCATTCAGAAGCGCAGCGGACACCTGGGTCACTATGCTGATCTTTACGGCCACGGGTTGAGCTCGGGCATCGCTGTCCATGCTGGCCCAGCTTTCGGCGCCCACGGATTAGCCGGCCCAGCCATTGCTGGTCATGCCATTGCTGGTCATGCTATTGCTGGTCCTGCTATCGCCGGTCCTGCTATCGCTGGTCCTGCTATCGCTGGTCCTTATGGCGCCGGTGTGATCGCCGCCGAGGGTGCCGGAGGAGCTATTATTGGAGCTAATGTGCACACCACTATAACTAGACACGTCGGAGTACCCGTTCCAGCTCCGTACCCTGTTGCCGTCGACAGACCTGTGCCATACCCAGTCAGAGTTGGCGTACCTTACCCCGTGGACCGCCCCTACGCCGTACCCGTCCCCAGACCTTACCCAGTAGCCGTTGAGAAGCACGTCGCCGTACCAGTCGACAGGCCCGTACCGGTACCCGTACCCCATGCAGTACCGGTACCCGTGGTCAAACAAGTTGGAGTACCAGTCCCCGCTCCGTACCCAGTGGCGGTACCCAGGCCTGTTGCCGTACCAGTACCCGCTCCAGTGGCTGTACCTTATGTGAAATCCGTCATCGGCGCCCACGCACACTTGGGCAGCGCAATCGGACACGATATTCACTCGCACGGCTTCCTCGCACACAAACACGGATGGTAA
Protein
MKAFIAVLFVVASVLGDPEPSKTIQKRSGHLGHYADLYGHGLSSGIAVHAGPAFGAHGLAGPAIAGHAIAGHAIAGPAIAGPAIAGPAIAGPYGAGVIAAEGAGGAIIGANVHTTITRHVGVPVPAPYPVAVDRPVPYPVRVGVPYPVDRPYAVPVPRPYPVAVEKHVAVPVDRPVPVPVPHAVPVPVVKQVGVPVPAPYPVAVPRPVAVPVPAPVAVPYVKSVIGAHAHLGSAIGHDIHSHGFLAHKHGW

Summary

Uniprot
ProteinModelPortal

Ontologies

GO

Topology

SignalP
Position:   1 - 16,         Likelihood:  0.997449
 
 
Length:
251
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
2.52319
Exp number, first 60 AAs:
0.49578
Total prob of N-in:
0.04132
outside
1  -  251
 
 

Population Genetic Test Statistics

Pi
194.11762
Theta
150.891667
Tajima's D
0.641929
CLR
1.120422
CSRT
0.557922103894805
Interpretation
Uncertain
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