SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO10768
Pre Gene Modal
BGIBMGA008397
Annotation
PREDICTED:_glycine-rich_cell_wall_structural_protein_1_[Bombyx_mori]
Location in the cell
Nuclear   Reliability : 1.663
 

Sequence

CDS
ATGGTTCGAATAAATTATATTTTCCTGGTCTTTTGCTTCAATTATGCCCTGAGCGCTGAACAAAAGAAGAGATCATATGTTGGCGGTGGATCGCACGGATTCAGTTCTGGAGGCGCTATTTCATCAATTGGAGGAGCTGGAATCGCATCGTCTGGAATTATTTCTTCGATTGGAAGCGGCATCGGAGCAGAGGGTGTTGGTGGAGGCTTTGTGTCTGGAGGTGCTGGAGGTATTGGCGGTATCGGAGGATTCGGGGGCATTGGCGCTGGTGGAGTTGGAGGTGGATCAATAATCGGTTCAGGATCGCTCAGTGGGGTCCCAACGCAACACACGGTATCGGAATACTACAATACTGTAGCCGTTCCCGTTCCTCAACCGGTACCAGTATCCGTGCCTAGGCCTGTACCGTACCCGGTACATGTTGGTGTGCCGGTCGACTCGCCCCGACCTGTGCCGGTGCCTGTACCGCAACCCGTACCTCATGTAGTAACGCGACCTGTAGCCGTCCCAGTTGATAGGCCTTACGCGTACCCGGTAGCCCAGGCGGTACCCGTTACGGTAACTCAAAGTGTTGGCATTCCTGTTCCGCAGCCCTATCCCGTATCAGTTCCCGCCCCAGTGCCTGTCAGCGTACCCCAAGCGGTTTCTGTTCCAGTTACCATTGTGGCTTCTGGATCTGGAGGAGGACTTGGACTTGGCGGTGGAGTCAGTGGATTCGGAGGTGGCTTCAGTGGAATTGGGGGTGGCGTCAGTGCAGTTGGGGGTGGGATCGGGGGATATGGCGGTACGGTTGGTGGTTTTGTGCCATCTTCTGGCATTGGCTTAGGGGTAGGCGGTGGCATTGGACACGGTATAGGATCTGTAACTTTAGGATCATCCTTGGGATCATCGTTGACTTCCGGCTCGTTGTCAGGTCACACGATCGCTACGTCTCATGGTCACCGCATTCACCATTCGTATTAA
Protein
MVRINYIFLVFCFNYALSAEQKKRSYVGGGSHGFSSGGAISSIGGAGIASSGIISSIGSGIGAEGVGGGFVSGGAGGIGGIGGFGGIGAGGVGGGSIIGSGSLSGVPTQHTVSEYYNTVAVPVPQPVPVSVPRPVPYPVHVGVPVDSPRPVPVPVPQPVPHVVTRPVAVPVDRPYAYPVAQAVPVTVTQSVGIPVPQPYPVSVPAPVPVSVPQAVSVPVTIVASGSGGGLGLGGGVSGFGGGFSGIGGGVSAVGGGIGGYGGTVGGFVPSSGIGLGVGGGIGHGIGSVTLGSSLGSSLTSGSLSGHTIATSHGHRIHHSY

Summary

Uniprot
ProteinModelPortal

Ontologies

GO

Topology

SignalP
Position:   1 - 18,         Likelihood:  0.832615
 
 
Length:
320
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
87.4054600000001
Exp number, first 60 AAs:
29.00375
Total prob of N-in:
0.69997
POSSIBLE N-term signal
sequence
outside
1  -  320
 
 

Population Genetic Test Statistics

Pi
180.120011
Theta
204.992441
Tajima's D
-0.339534
CLR
0.010148
CSRT
0.27943602819859
Interpretation
Uncertain
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