SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO10767
Pre Gene Modal
BGIBMGA008398
Annotation
PREDICTED:_uncharacterized_protein_LOC106101526_[Papilio_polytes]
Location in the cell
PlasmaMembrane   Reliability : 4.826
 

Sequence

CDS
ATGTATACGAGTCTACCTTTCTCGATGGAGCACATTCCTAAACAAAAGGGCTTCGGATGCCTATCTCTCAAATTTGGCTGTATATTATCGGGCTTAACTTTAATCCTGTACTCCGTGCTGGTAATAGCGCACTCCTCAGCCGCCATCGCAACAGCCTCACAGTCGCTAAAGTTCGACTGGGAAGGAGTTTTGACGTATGGCGTTTTGGCAACTGTCATTTTGACACATTGCGTCACGCTGTTCCTGACAGCCATCATGCTTGTCGGCACTTTGAGGGAAAAACCTCACTTGATGCGTCCTTGGCTGGTGTGGATGTCTGTGCAGATCATGATCTACGTTCTCATGTTCGTGTTTTGGACCACAACTAACATGGTCAGTCATATGGGCGACACGTCGATGCTCGGATACGCGTTGGAATTTCTAACTCTCTTAATTCGTTTCTACATGCTGGTCCTTGTTGCAAGCTATTACGATTTGTTAGAAAAGGACAGAGAATACGGAGAGAGACTCAAAAGTTTGAACAATCAACACTGGTACAACTCTGCTTGA
Protein
MYTSLPFSMEHIPKQKGFGCLSLKFGCILSGLTLILYSVLVIAHSSAAIATASQSLKFDWEGVLTYGVLATVILTHCVTLFLTAIMLVGTLREKPHLMRPWLVWMSVQIMIYVLMFVFWTTTNMVSHMGDTSMLGYALEFLTLLIRFYMLVLVASYYDLLEKDREYGERLKSLNNQHWYNSA

Summary

Pfam
PF15860   DUF4728
Interpro
IPR031720   DUF4728       

Ontologies

Topology

Length:
182
Number of predicted TMHs:
4
Exp number of AAs in TMHs:
90.26005
Exp number, first 60 AAs:
23.13342
Total prob of N-in:
0.96930
POSSIBLE N-term signal
sequence
inside
1  -  20
TMhelix
21  -  43
outside
44  -  65
TMhelix
66  -  88
inside
89  -  100
TMhelix
101  -  120
outside
121  -  134
TMhelix
135  -  157
inside
158  -  182
 
 

Population Genetic Test Statistics

Pi
240.601621
Theta
163.007274
Tajima's D
2.487021
CLR
0.031648
CSRT
0.942052897355132
Interpretation
Uncertain
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