SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO10764
Annotation
Uncharacterized_protein_OBRU01_10026_[Operophtera_brumata]
Location in the cell
Extracellular   Reliability : 1.55 Nuclear   Reliability : 1.419
 

Sequence

CDS
ATGTCGAGTTCAGAAAGTGATAACGAAGTTTTAATGTTACTGAATTCAAGCGACGATTCAAGTGATGATACGCGAAGTAATAGAGTGTATAAAACAAGAATCAATTATTATTCAGAGCTCGATAATCAGGAGTTTCAACTAAGATTTCGGCTCGACAAGCAGTCTGTGCAATTACTGTTAGGTGAAATTTATCCTTTTTTAAAGGTAAAAGGAACCAGGAATCATGGAATATCTCCCTTACATTACAATTTATCAGTTTTTTTTGGTATTTTGGCGCGGTCCGGCCGACATCTGGCGTTTCCTTTGTCTCTTCATGGCGTTTTGTTCACTTTACAGTTAAAACTAAAGTAA
Protein
MSSSESDNEVLMLLNSSDDSSDDTRSNRVYKTRINYYSELDNQEFQLRFRLDKQSVQLLLGEIYPFLKVKGTRNHGISPLHYNLSVFFGILARSGRHLAFPLSLHGVLFTLQLKLK

Summary

Pfam
PF13359   DDE_Tnp_4
Interpro
IPR027806   HARBI1_dom       

Ontologies

GO

Topology

Length:
116
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
1.2836
Exp number, first 60 AAs:
0.00039
Total prob of N-in:
0.21950
outside
1  -  116
 
 

Population Genetic Test Statistics

Pi
362.090508
Theta
183.302652
Tajima's D
3.069037
CLR
58.210574
CSRT
0.980550972451377
Interpretation
Uncertain

Multiple alignment of Orthologues

 
 

Gene Tree

 
 
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