SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO10762
Annotation
PREDICTED:_uncharacterized_protein_LOC106101508_isoform_X2_[Papilio_polytes]
Location in the cell
PlasmaMembrane   Reliability : 4.922
 

Sequence

CDS
ATGGTGTTCCACTTGCCGAGATTCACGAAATGCTGCTGTTGTATACCCTTGAGGATTGGATCGTTATTAATCGGATATCTTTCGATTATAATCTCTTGTGTAGCACTAGCTTCAATTTCCTGGTTGATCTACCGAGTGGCTTCGTTTGTGGAGAATAATAAGGATAGCCCAAGCACGGAGCACACACAAGAAGAGTTGGAGCACCACGCGCTTTCTCTATACCTATCATTTTCTTACTCTATACTTGTCTTTATCTACTATTTAATAATAAGCATTATTTTGCTTTATGGGGCTCACTTGAAAAATCCTAAATATCTTCGAATTTACTTTAAAGCTGCGTTATATTTACTAGTATTGGCTGCTGCTATGGTTGTAGTGTCGTGTGTGTTTTTGGGCTTCATAGCAGCTATACTGTTGCTAATTTGGAGTTTTTTTTTGTTTATCTGTACGATTGTTGTGAAAAGTACAGCATTGGAATTGGAGGAAGAGAACAAGCCAAAGACTTATGAAATGCAGAGTTTATATATCACGGGAAGAATACCCTCTGCCTACATTAGTGATAATTTAGATTTGGATCTTTAA
Protein
MVFHLPRFTKCCCCIPLRIGSLLIGYLSIIISCVALASISWLIYRVASFVENNKDSPSTEHTQEELEHHALSLYLSFSYSILVFIYYLIISIILLYGAHLKNPKYLRIYFKAALYLLVLAAAMVVVSCVFLGFIAAILLLIWSFFLFICTIVVKSTALELEEENKPKTYEMQSLYITGRIPSAYISDNLDLDL

Summary

Ontologies

Topology

Length:
193
Number of predicted TMHs:
4
Exp number of AAs in TMHs:
84.9003900000001
Exp number, first 60 AAs:
23.01529
Total prob of N-in:
0.98244
POSSIBLE N-term signal
sequence
inside
1  -  20
TMhelix
21  -  43
outside
44  -  75
TMhelix
76  -  98
inside
99  -  104
TMhelix
105  -  127
outside
128  -  130
TMhelix
131  -  153
inside
154  -  193
 
 

Population Genetic Test Statistics

Pi
262.386053
Theta
154.962849
Tajima's D
2.230445
CLR
0.009809
CSRT
0.912104394780261
Interpretation
Uncertain
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