SGID The Silkworm Genome Information Database
Gene
KWMTBOMO10757
Pre Gene Modal
BGIBMGA008419
Annotation
NA
Location in the cell
PlasmaMembrane   Reliability : 4.962
 

Sequence

CDS
ATGGCTTGCCCGACGTTTCTGCAGGCATGCTTCAAAACGGACACAGCTTGCGGCCGTTGCCTGTCGAAGAAGATGACCTGTTACGTCTTAGCTATAATTTTATTTATTCTCGAGGCCTTAGAATTCGTGAGTTTCGTTTTCCAACCATCTTCAATGAGGCCTACCACTACGCACCTGAACAACGCGGAGGTCGCCGTCGGAGTACTAGTGTCGCTACTATGTTTGTTCTTCTCCGCGCTGCTGATCGTCGGATTATACAAGGACCGCCTCTCTTACTTGAAGGCGTACATGATATACGCCATTATCGTGATCACATTTTCAACAATCGGTTTCTTCATGCTCCTATTCACAAGACCCTCGGAAATGGGCCTACGTGGGTTTTTCAATATGGTAATTTCGATAACGCTACTCGTTCTAAGTTTGCTCGCAGTACGTGCCTACCACGCCCAAGGAAGAAGCTACAATAATAACAACCAACGTGGAATTATCTGA
Protein
MACPTFLQACFKTDTACGRCLSKKMTCYVLAIILFILEALEFVSFVFQPSSMRPTTTHLNNAEVAVGVLVSLLCLFFSALLIVGLYKDRLSYLKAYMIYAIIVITFSTIGFFMLLFTRPSEMGLRGFFNMVISITLLVLSLLAVRAYHAQGRSYNNNNQRGII

Summary

Uniprot
ProteinModelPortal

Ontologies

GO

Topology

Length:
163
Number of predicted TMHs:
4
Exp number of AAs in TMHs:
88.7151499999999
Exp number, first 60 AAs:
22.44496
Total prob of N-in:
0.99813
POSSIBLE N-term signal
sequence
inside
1  -  26
TMhelix
27  -  49
outside
50  -  63
TMhelix
64  -  86
inside
87  -  94
TMhelix
95  -  117
outside
118  -  126
TMhelix
127  -  149
inside
150  -  163
 
 

Population Genetic Test Statistics

Pi
265.233458
Theta
157.100795
Tajima's D
2.00693
CLR
0.046624
CSRT
0.883905804709765
Interpretation
Uncertain
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