SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO10753
Pre Gene Modal
BGIBMGA008400
Annotation
PREDICTED:_uncharacterized_protein_LOC101743983_isoform_X2_[Bombyx_mori]
Location in the cell
PlasmaMembrane   Reliability : 4.923
 

Sequence

CDS
ATGCCTCTGCCGTTGCTAAGGAGGTGCTGTGGATGCCTCCCCCTTGAAGCCGGCTGCTTCATACTCTGCATAGCATCTACTATGGCATGTGTAGCGAACATAGCTGCCGGTGCGTGGAATCTCCCGAGGCATAGAGACCGCGAACCAGAGGACAACCTTATATCCATGAGCATGATCATGTTCTCCTCATTATCAGCCATCGGGAACATCGTCGCTTTGTTCGGTATATGGCTAAAAAGGCCCGGAAACCTACAGTTGTCCTTAGTGTTCAACTCGATTTTCATCTTATGCATATTCTTGGTGTCAATAGTGACCTGTATCTTCAGGATGGATGAATTCCTCAAGCTACCCGGGAACATAGCTCTCGTAGTGGTAACGCTTATAGCTGGAGCAGTTTATTCGCTGTACTACTTGACGGTGGTCAATAGTTTGTATCGGACCATGAAAATGTCTTACAGCGAAAGCGCTCTGCCGATTTGA
Protein
MPLPLLRRCCGCLPLEAGCFILCIASTMACVANIAAGAWNLPRHRDREPEDNLISMSMIMFSSLSAIGNIVALFGIWLKRPGNLQLSLVFNSIFILCIFLVSIVTCIFRMDEFLKLPGNIALVVVTLIAGAVYSLYYLTVVNSLYRTMKMSYSESALPI

Summary

Ontologies

Topology

Length:
159
Number of predicted TMHs:
4
Exp number of AAs in TMHs:
89.76508
Exp number, first 60 AAs:
28.45083
Total prob of N-in:
0.97523
POSSIBLE N-term signal
sequence
inside
1  -  16
TMhelix
17  -  39
outside
40  -  53
TMhelix
54  -  76
inside
77  -  87
TMhelix
88  -  110
outside
111  -  119
TMhelix
120  -  142
inside
143  -  159
 
 

Population Genetic Test Statistics

Pi
156.730334
Theta
149.070071
Tajima's D
0.222959
CLR
0.681336
CSRT
0.43652817359132
Interpretation
Uncertain
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