SGID The Silkworm Genome Information Database
Gene
KWMTBOMO10749
Pre Gene Modal
BGIBMGA008403
Annotation
PREDICTED:_methyltransferase-like_protein_25_isoform_X2_[Bombyx_mori]
Location in the cell
Cytoplasmic   Reliability : 3.105
 

Sequence

CDS
ATGGCTGTAAGTAAGGATTTTAATGACGTATTAGATGACATAGTGCTTGGTGAAGAAAAAGAGAGCAAGTCTAGCTATGATGAAGGGTTCAGAGCAGGCATAGAAGCTGGTAACATAGAGGGTTATCACTTGGGCTATCATCGGGGTGCTGAACTGGGTCGTGAGCTAGGTTTCTACTGGAGCACAGTAAATGAATGCCTTGAACTAAATGAAACATCAGACGCAAAATTATCAGAAAAAATAATAGCCCAGCTGCTCAAAGTTAAAGAACTAATAGATACTTTTCCTCCTAATAATTCTGAAGACCATGACATACTAGGTATGGCCGATGCAGAGTCTCATTCTAAAAGAAAAGATTCAATGAAAACAACAATTCGTAGTCTATGTCACAATATAGATTCCATAATCAACTACCTTGCACCATATTTGCCACTGGTCAACTGTCATATGGTAGAATTCCTAACAAATGACCACTGGAATACATACTTGCCAAATAATTTAAAAGAATATCTCGATCAGCTGGATTTGAATGAGTCACTGGAGCAGTTTTGGAATGCTACTAACAGCTATAAAGGCAATGAACCGACTGAATTGAGAAAATGGATAACGGAGGCCAGAAAACATTATTTGGAAGTCAATAATGACTATTGTTTGTCAGTTGAACAGTTGAATGAAAGGATCAAGTCATGGGGCGGGGAACTGCAGCCAGAGATCAAGGTTAAAGAATTTATGAATAACAAGAAGAGTTATGAAGTACAAACAATGGCACGTGCAGTGTCGTCTGTATACTCGGCGGCATCAGGCACGTGCTGCGTGGAGGCGGGGGGAGGCCGGGGACACTTGCTGACGACCCTAGCGCTCGGGTACCACATACCCAGCCTCACTGTGGATTGCGACCCGAAAACACTAAGTGCTGCTATAAATAGAGTCAAAGTTATACAGAAACAATGGCACGCCATCGCCAAAAGGATACACGACGGAGCCGAAGAGAAACCGCCTCACTTCAATAAAGACCTCCAGAGATTCGCTCAGGCTTTTATAACCAAAGACACTGATCTTGGAGGCGTCGTCAGAGAGATGTTCCCAGAGTGTAAAGACTTGGATACTAGGATTATTCTCACTGGTCTCCATACTTGTGGGAATCTTGGTCCGGACTCGCTTCGTATCTTCACGGCTCGATCGCAGATAGCAGGCCTCCTCACGGTCCCGTGCTGTTACCACCTCCTCACCGAGGACTCAGACGTGGAACTCTTCGATGTTTTCCAGAAGGAGTACGGAACTGGAGAGAGGACGCAGGGTTTCCCGATGTCTGAGTATCTGAGAGGCTACAGGCTGGGTCGCAACGCGCGCATGCTGGCGGCGCAGTCCGTGGACCGCGTGCTGCACCAGCGCCAGCTGCCGGCCCACAGCCTGCTGCACCGGGCCATGCTGCAGGTTGTCATCAAGAAATATTTACCAAACACCACATTAAAGGAAGGCAAATTGAAACGCATCTCGAAATGCGACACCTTCGAACAATACCTCAAGATGGCCGACAAAATTCTTAATTTAAATCTAAATCTGCCCGAAACGTTCTACACAGATACGCAATTGTATTTGGATTGCCAGTGGAAAAAAATGACTTTATTTTATTTAATCAGACTGTGTTTGGCCCAAGTAGTGGAAAGCGTAATATTGTTGGATAGAATATTGTTTTTGTATGAGAACGGCTTCGAGAAAGTTTATTTAGTTAAATTATTTGATCCGGTTTTATCGCCGCGCTGTCACAGTATTGTTGCTTTAAGATAA
Protein
MAVSKDFNDVLDDIVLGEEKESKSSYDEGFRAGIEAGNIEGYHLGYHRGAELGRELGFYWSTVNECLELNETSDAKLSEKIIAQLLKVKELIDTFPPNNSEDHDILGMADAESHSKRKDSMKTTIRSLCHNIDSIINYLAPYLPLVNCHMVEFLTNDHWNTYLPNNLKEYLDQLDLNESLEQFWNATNSYKGNEPTELRKWITEARKHYLEVNNDYCLSVEQLNERIKSWGGELQPEIKVKEFMNNKKSYEVQTMARAVSSVYSAASGTCCVEAGGGRGHLLTTLALGYHIPSLTVDCDPKTLSAAINRVKVIQKQWHAIAKRIHDGAEEKPPHFNKDLQRFAQAFITKDTDLGGVVREMFPECKDLDTRIILTGLHTCGNLGPDSLRIFTARSQIAGLLTVPCCYHLLTEDSDVELFDVFQKEYGTGERTQGFPMSEYLRGYRLGRNARMLAAQSVDRVLHQRQLPAHSLLHRAMLQVVIKKYLPNTTLKEGKLKRISKCDTFEQYLKMADKILNLNLNLPETFYTDTQLYLDCQWKKMTLFYLIRLCLAQVVESVILLDRILFLYENGFEKVYLVKLFDPVLSPRCHSIVALR

Summary

EMBL
BABH01001553    AGBW02009561    OWR50502.1    GDQN01011283    GDQN01002466    JAT79771.1    + More
JAT88588.1    NWSH01000253    PCG78002.1    KQ459606    KPI90958.1    KQ971312    KYB29369.1    CCAG010011403    UFQT01000997    SSX28375.1    GECZ01003032    JAS66737.1    GECU01013512    JAS94194.1    JXUM01109182    KQ565297    KXJ71117.1    JRES01000735    KNC28892.1    JXJN01019826    GFDL01007332    JAV27713.1    DS232581    EDS43658.1    GEDC01005753    JAS31545.1    GEBQ01002794    JAT37183.1    CH933808    EDW09594.1    ABLF02029453    GDHC01016996    JAQ01633.1    CH940648    EDW60587.1    GDKW01000418    JAI56177.1    ATLV01025853    ATLV01025854    ATLV01025855    KE525401    KFB52636.1    CP012524    ALC41830.1    GFXV01001778    MBW13583.1    GEZM01002890    JAV97085.1    CVRI01000001    CRK86355.1    CM000071    EAL24938.2    CH479181    EDW31719.1    CH480816    EDW47510.1    AXCM01000462    CH902619    EDV36181.1    GAKP01013366    JAC45586.1    DS235845    EEB18395.1    CH982209    CM002911    EDX15539.1    KMY93116.1    KB632173    ERL89579.1    CH963894    EDW77073.1    AXCN02002379    NEVH01009368    PNF33505.1    ADMH02000135    ETN67646.1    APGK01019954    KB740150    ENN81253.1    OUUW01000001    SPP75112.1    GGFJ01004679    MBW53820.1    AE013599    BT003595    AAF58558.4    AAO39598.1    GGFJ01004680    MBW53821.1    GBXI01015870    JAC98421.1    GDHF01000798    JAI51516.1    GAMC01004102    JAC02454.1    GGFJ01004676    MBW53817.1    CH954179    EDV56369.1    CM000158    EDW90824.1    GGFK01009488    MBW42809.1    CH916375    EDV98211.1    APCN01001422    AAAB01008823    EAA45304.4    ACPB03006429    GDHF01020112    JAI32202.1    GGMR01018246    MBY30865.1    GDIQ01024458    JAN70279.1    AJVK01005022    AJVK01005023    GFWV01004108    MAA28838.1    AMQN01005883    KB297068    ELU10992.1    GDIP01137236    JAL66478.1    GDIP01182639    JAJ40763.1    GDIQ01110584    JAL41142.1    GDIP01211481    GDIP01133634    JAJ11921.1    GDIP01102547    JAM01168.1   
Pfam
PF13679   Methyltransf_32        + More
PF09811   Yae1_N
Interpro
IPR025714   Methyltranfer_dom        + More
IPR019191   Essential_protein_Yae1_N       
IPR029063   SAM-dependent_MTases       
SUPFAM
SSF53335   SSF53335       

Ontologies

Topology

Length:
595
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.635749999999999
Exp number, first 60 AAs:
0
Total prob of N-in:
0.00760
outside
1  -  595
 
 

Population Genetic Test Statistics

Pi
168.072791
Theta
160.262456
Tajima's D
0.630938
CLR
0.089576
CSRT
0.555372231388431
Interpretation
Uncertain
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