Silkworm Genome Informatics Database

Gene

KWMTBOMO10747

Pre Gene Modal

BGIBMGA004629

Annotation

PREDICTED:_facilitated_trehalose_transporter_Tret1-like?_partial_[Papilio_machaon]

Location

Bomo_Chr18(+):2319401-2319696 View in EpiBrowser

Location in the cell

Extracellular Reliability : 1.5 Nuclear Reliability : 1.745

CDS

ATGTCCATATTTCATGAAATCTTTTTATACTTCATCCTACCGGAGACTAAAGGGAAGACTCTTTACGAAATCGAGAGCCAAGCACGTGGGTCCGGGACCACTGATCTTGGTGCTGAAGGAAGTCCTCAACAAGATCATCTCTGCGTTGTACAAGCCTGCCAAACTCCTGAAGGACTGGGAGACCGAGGGTCCCCCCGAGGAAATTCACCCAAATATTGA

Protein

MSIFHEIFLYFILPETKGKTLYEIESQARGSGTTDLGAEGSPQQDHLCVVQACQTPEGLGDRGSPRGNSPKY

Similarity

Belongs to the major facilitator superfamily. Sugar transporter (TC 2.A.1.1) family.

Uniprot

A0A0K8UW42 A0A0K8U7F4 A0A0A1XMG3 A0A0A1WZP5 A0A0A1X9S2 A0A154P185 + More

Pubmed

25830018

EMBL

GDHF01021586 JAI30728.1 GDHF01029808 JAI22506.1 GBXI01001773 JAD12519.1 + More
GBXI01010444 JAD03848.1 GBXI01006884 GBXI01001403 JAD07408.1 JAD12889.1 KQ434796 KZC05686.1

Proteomes

UP000076502

Pfam

PF00083 Sugar_tr

Interpro

IPR020846   MFS_dom        + More
IPR036259   MFS_trans_sf
IPR005828   MFS_sugar_transport-like
IPR005829   Sugar_transporter_CS
IPR003663   Sugar/inositol_transpt

SUPFAM

SSF103473 SSF103473

CDD

cd06174 MFS

ProteinModelPortal

A0A0K8UW42 A0A0K8U7F4 A0A0A1XMG3 A0A0A1WZP5 A0A0A1X9S2 A0A154P185 + More

KEGG

101738160 no KO assigned | (RefSeq) scm-like with four MBT domains protein 2

GO

GO:0016021 GO:0022857

Length:

72

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.00036

Exp number, first 60 AAs:

0.00036

Total prob of N-in:

0.07959

outside

1 - 72

Pi

216.471747

Theta

123.543261

Tajima's D

2.361907

CLR

0

CSRT

0.932653367331633

Interpretation

Uncertain

Sequence

Summary

Ontologies

Topology

Population Genetic Test Statistics