SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO10744
Pre Gene Modal
BGIBMGA008407
Annotation
PREDICTED:_pecanex-like_protein_1_[Bombyx_mori]
Location
Bomo_Chr18(-):2254127-2269920      View in EpiBrowser
Location in the cell
Nuclear   Reliability : 2.863
 

Sequence

CDS
ATGGGTTCACAAACACTAGAGATATTGCGTCAAGGTGTTTGGGCGTCTTTAACTGGGGGATGGTTTTATGATCCACATCAAAATTTGTTTTGCAACACGGTCCACCTTTATATCTGGCTGTTTCTACTATGCGTACCGTTCTCAGTCTATTTGTATTTCCCACCATCAAGCTTAGGTTGGATCATATATTGCATCCTTGTAGCTGTACTATTCACAGGATTAAAGCTTCTGAATAGAAGCCTACATCATTTGTATGACACCTCCGAGTTCATAGTTGTACAACCTTCTGATGACCCTAACACCTCAAATGAGAACAATACTACGGACGAGGGCATCGAGATGCAGATGATGAAATTGACAGCTGCAGCCGCATCTGGAACTGACAATGAATCAGTCACATCCCTCGAGTACCACAAACCCAACAATAGCACTATAGATTTAAAAGTAGACGTCCATCGTAAAAACAGTTCCGAAACAAGCATAGAAGACAGCGCTATATCATCGAAACAAGCAGAGCCTGTAGCGACTACCAAATCAGATTTATGTGTCGCTCAACCGGCAGACGTTCCCGGTCCATCAAGAAGCCGTCCAACAAATAGAAGTAAATCCAGATCAGGCAGAAGAGAACAGAGAACTTCCAAAAGAAGAACTTACGGGAACAGAATAGAAGAATTGATCGAAGCTTCTAGAAACCCTCGTACAGAAAGCAACGTGCCCAATCATATTTTAGTAGAAGACGGTCCCTTTGCAAAAGTTAGTCGGCGGTACAATGAGTGTCCCCACAGACGACCTACAAACCGGGATTGTTTTAAAGAATGGTTGTATTTAGATGGTCATGAAGCTGGGGAGCCGTATCAATCCAAATTTGCCCGACAGCTGAGCTCCGACTCTAGGGATAACTCGGAGCCCAGCGTCGGTCCTCCGTCACCAAAAAAACGTATAGCTCACAGGCGTAGATACACTATATATCCTTACGAAAGCTGTACTAAGTCTGCGATGGCTTTAGCGACCGGTCAATCATCTAATATGAGAAGGAATTCAAACTCCACGATGTCAACTATACAATTGCCCCTTCTGAATTCGACTGCACAACTGGTTTCCCATATGAGAAGACATTCTAACAACGCTGATACAGGGTTTTTTGCCAGCGTTGAACTTGGCGAGTACATGATGGTTAAAAAGGAAGCACCAGTAGGAGACGTTGAAAAGAATAAAGGGAAAAGCCCAGGCGTTCGAAGAATAAAAAGTGCTGCTCTAGAAATAGGGTGTCCACTTCCTAGTGTATCTAACTTATCCCCCCATCCTAATAGTGCTGAAACGATAGGTGGTCAAATGTTAAAGAACCCCAAAAGTGCTGTAATACCTCCCCCCAGCAAAAGTCTTACGCGAGGCCCCCATTTAAATCTTTATCCCAAGAATGAGAACGGAGAGGGCTGCAGTTACCCTTACTTGACATACGGATCCGAAATTGTTTATCCCATAGCAGAAATTTCTGATGAAATGCAGACATCCCAAAAAGAGACTGATTTAGACTCTAGCGGTGAGAGTTATAGTGATTACGATGATGAAAAGCAGTTCCGGGGATTTGATTGGGATGCTGAACAGTCTCTGGCGATGAGATCCAGCGACTCGGACTACGAGAACAACGGTTCCAGGTCACCATTGTTAGAAAGGCCACCTGGAATCAGAGTGGTCCGAACGAAGAGCCACGGTGATTCAAAAAAACATTGCTGTGAACGCCACAGCAATTCCAAACACAATCAGGACTCTCAATACGACAGATCTAAGTGTGTCAGATTAAAAAGATTCAAACATGAACTAGACAATTATGAAAAGCATGCTGAAAGGCAATCGGCACCTTGCGATTGCAAATCTAATGTTGTATATTTCGACAAAACTAGTGCGAGCTCAAAAGATTTGCTAATAGAGAAATCTAGCTTAGAATCAAACGATAATCCACAACAAGAGCAAAAAGTAGAAGAATCAAAAACTGTCGAGAAAAAACTTTGGGACCACGATATATTTAATTCTAGCAGCAGTAGTAGTTGTGACGTAGATAGACCTAATACTAATGTTGATAAGAACCACATTCCGGAGACAGAGGAATCACAGCTAACTGGTGACAGTAAAAGTGCAGATGAACGAAGTGTATATAGTTTAGACTGGTTGTTTGAAGAGACTGCTAAACGTGGCGTTTACAAAGAAGACTCTCTCAATCCTGACGAGGTTTTATCACAAAACGTCGCAATCGCCCTAGGAGAGTCTTCGGTTAACGTCCCAAAAAATTTAGGAGCTATACCGAAGCAATTAAAGAGCGCGACGCGGTCCCGTGCTTCATCTCAGAAAGAAAACAAGAAAAGGGATTCAAAAAAGGAAAAAGACGATAGCCAAAATGAGGAAAGAATGCTCATGGAGTCGGCAGAGGCGCAGGCCGCTTGCGCCTTAGTTCAAGGGTTGGAGTGTTTGTTTGCTGCGACGAACGCCAACACGGTCGTGATGCCCCCTCCGAACCGAGACGAGCGATCCAGGGCTCACAGGCAAAGCCTCCGCGGTGACAGAGAAAACGTACATAAAACTAGGAAACGATCTATAGAGGAAGTAGCCCAAACATCAACAAGCACTCTCTTGCCGACATCAATGCCACTTTTGGCGGCCTTTTTAAATTCTAGAGTGGATTTTACCCCTTGCTGTGCTTCGACAATGGGGCAAGCCTGTGAGAATACTACGACAGAACCATCACAACCTCAGGAAGATGGTCAAAGGCTCCGACCATTGATGGACCGCAACCATCGACATAGAGTCAGAAAAATCAAACGCTCCACCCGTAAAAGGAATAACTCTTCGTCGCAGAACAACCCCGAGACTAAGGACAACCAGTCCAATGCTGAAAATTGTAATAGTTCAACTAACGTTCACTTCGCTAAGTCATTTGATGACACGAGCGACGGAGCCATACACTGTTTCATGGACGAATACGGTAATTGGATGTCGTATACTTTCGATAAAAACGGCTGTGCTCGTGTGCAAGCGCAGCCCATACCGCTACCGGAGAAAGAGGACGGAACCAGGATAAACAGGGTAACCCCCACAGACACGGCGGCGGACAATTCCCAGGAGACCGCTGGCGAAGGTAGCTGCGGCTCCCTGGAGTCTGAAGCTGGAAACAGCGAGAGCTTAGCGAAGACCAAACGCGGGGACAGCCTGGACCGGAGCTCCTCCAACCAAGGCAGCAACAACCCCTTACTGTCGAGCAGTAATAACGTTTCGACGGTAGTCCCAATAAATACGAATACGTCCAATAAACGGTTTTATGTTTTCGACGGCGGGACCGGAACGCACACAGATCAGCCTCGCTCGCCTGTGGCCTACGTCACGGATAGCTTGCTAGAACAAATCGAAGCGGAGAGGCAGTCCCGAATGGGCCTGCCTAGTATGCACATTAATTTGCTCATGAGGGAGCAGAGAGCTCAGCAGCAAGCACAGCAACCGGCCGTGGAAACTGCGTCGACGAATAACGTTTCGAGCATGATGCCGGCAATAGGAGAGATCTCCGAAGATAATGTCGAAATACACTTCAGAAATACAATATCAAAGCTTATAGATGAGATCGGTAAAATGAATCAACCAAAGCCCCCGCCTGACCAGCCCAAGGGCTACTACAAATACAAACTGTCCAAATGTATGGAAGTTAAAGTAACAATGGACAGACTAAAGTTGATGGCGTTATTCGACAGAAACTTGACATTTTCGGAGACTTTGATTACGATACTGCTGGCCGTCATGGTGTCGGTGTTGGGTTCCATGGTGCTAAGCCTCGGCTTCTACAGGGACATATACGCGTTTTGGTTTTGTTTCATAATAGCCGGAAGTCAATATTCGTTGTTGAAAAGCGTTCAGCCGGATTCGGCATCGCCCGTCCACGGCTTCAATAAAATGGTGCTCTTCTCTCGGCCGGTGTACTTTTGTTTATGTACAGCCCTTCTGTGCGGGGTGCACACGTATATGCAGCAGAGCGGGGCGCCCTCAGACGAACATTCCAGAAGTAAACGTAGCGCCGTAGAAATGAAGCCCTTGACGATATACGGCTTCCAAATGAACGAAAGGGATTTTTTGTACGTCGTTCAAGAAATATTATCGAAGTTCCTTTTGTTCTTTCCGCTGGCTTTTAGCTTGGGATTATTCCCGCAAGTGAATACTTTCCTTATGTACTTGCTGGAACAAATTGATATGCATATTTTTGGTGGGAACGCGACGAGCAGTCTTAGCGCCGCTGTATACTGCGTGGCTCGGTCGATAGCGGCCGTCTGCATACTTTACGGGTTCGCGTATAGCGGCCTGATCGAAGGCAAGAAATCTCAACATCAGAAACACAATATTCTTTTCTCCATATTCTGCGGCCTATTGGTTCCTATATCGTACCACTTAAGTCGCAGTGCGAGCGATTACACACACATTTGGAACTTGATAAAGAAACACCTACTTCCACCGGAGCTGTATGTGGTGCACGGTCCCGAATGCGCGCCCGAACCAGACAAAACAGAACCGAGCTTACTGGCCGATGACAAGAAGGACGGCTCTGAAAGCAACATCTCCAAGCAGAACTCGATTGGAAGTTCCGCCTCTAAAATCAACTTCAGTTCGGAGACGAATATCGCGCGGACTCAGAAGAGGTCTCACGCGTCGAGTGCGAGCTCTTTGAAGATGGACCCCAGGGGGGACACGATGAATTCTACGACCTCTTTAAGGACGGATCCGACCGCGGAAGCTGAAGACAAAAGTCAAGACTCGATGAACACCTCGAAGCAAGACAATACAGACAAGCCTGATGAGGAGGACATGGAGGACCCTCTGCCGAAGAAACTCCAGGCTACTATCAACGCGCGACTGAAGAACGACGTTATAGTCTGCACATTCCTCGGCCTCTTTGTGTTCGGTCTGCACTGCACCACAGTTTTCACCACGCTCAAACCTCAACTCAATACGGTGCTATGGATAATAGCTGGTATATTAGGTTGGATACTGCACTACCTGTTGCCCCAGCTACGCAAACAACAGCCGTGGCTGTGCTTAGCGAGCCCGGTCTTGAAGCAGCACGAGCACGCGCAGTACGAGGTCACAGAGCCGGCGAAGGTTATGCTATTCGAAAAGTTGTTCGTGTACCTGTGCTTCGTGGAGCGGAACGTGGTATACCCGGCCGTGGTGGTGGCGGCCACCGCGCAGGACGCGCCGGCCCTCGCCCTCAAGTACGGGGACGCCGTGGGGGCGCTGCTGGTCTGCGTGTGCGCCCTCAAGTGTCTTCGACACGCTTATTCGGAGCCGGACAGCCAGTACCTGATAGTGGTGTTCGCGGTTCTGATCTTCCAGAAGGATCTCAGCAGCCGGGGCACTTCAGAAACGTTTCTAGTCGATTATTTCGTAACGGCCATTATATTCAGCAAGGTCTATGAATTTTTACTAAAGGTACAGTTCGTAGTGACGTACATAGCGCCGTGGCAGATCACGTGGGGCAGTGCTTTCCACGCCTTCGCCCAGCCCTTCTCGGTGCCGCACTCCGCCATGCTGTTCCTGCAGGCAGCCCTATCCGCCCTCATATCATCGCCTCTGACGCCAGCCCTAGGTAGCGCCATCTTTATGACGTCATACGTGCGTCCGATAAAATTCTGGGAACGCGACTACAACACCAAGAGAGTCGACCAGAGCAACACCAGGCTCTCGTCGCAACTGGAACGGAACCTGGGGTCTGATGACAACAATTTAAATTCGATATTCTACGAGCACCTGACGCGCTCGTTGCAGCACTACCTGTGCGGAGACCTCATGCTGGGCCGCTGGGGGCAGGTGCAGCAGGGGGACTGCTTTGTTTTAGCATCAGATTACCTGAACTGCCTAGTGCATATAGTTGAAATGGGGAATGGACTAGTGTCCTTCCAACTGAGAGGCTTGGAGTTCAGAGGCACTTACTGCCAGCAGAGGGAAGTGGAGGCGATATCAGAGGGACCAGAGGATAATAGCGGTAAAATAAATTCATTCTCATTCATTAAAACATCCTTTTATAATATTTAA
Protein
MGSQTLEILRQGVWASLTGGWFYDPHQNLFCNTVHLYIWLFLLCVPFSVYLYFPPSSLGWIIYCILVAVLFTGLKLLNRSLHHLYDTSEFIVVQPSDDPNTSNENNTTDEGIEMQMMKLTAAAASGTDNESVTSLEYHKPNNSTIDLKVDVHRKNSSETSIEDSAISSKQAEPVATTKSDLCVAQPADVPGPSRSRPTNRSKSRSGRREQRTSKRRTYGNRIEELIEASRNPRTESNVPNHILVEDGPFAKVSRRYNECPHRRPTNRDCFKEWLYLDGHEAGEPYQSKFARQLSSDSRDNSEPSVGPPSPKKRIAHRRRYTIYPYESCTKSAMALATGQSSNMRRNSNSTMSTIQLPLLNSTAQLVSHMRRHSNNADTGFFASVELGEYMMVKKEAPVGDVEKNKGKSPGVRRIKSAALEIGCPLPSVSNLSPHPNSAETIGGQMLKNPKSAVIPPPSKSLTRGPHLNLYPKNENGEGCSYPYLTYGSEIVYPIAEISDEMQTSQKETDLDSSGESYSDYDDEKQFRGFDWDAEQSLAMRSSDSDYENNGSRSPLLERPPGIRVVRTKSHGDSKKHCCERHSNSKHNQDSQYDRSKCVRLKRFKHELDNYEKHAERQSAPCDCKSNVVYFDKTSASSKDLLIEKSSLESNDNPQQEQKVEESKTVEKKLWDHDIFNSSSSSSCDVDRPNTNVDKNHIPETEESQLTGDSKSADERSVYSLDWLFEETAKRGVYKEDSLNPDEVLSQNVAIALGESSVNVPKNLGAIPKQLKSATRSRASSQKENKKRDSKKEKDDSQNEERMLMESAEAQAACALVQGLECLFAATNANTVVMPPPNRDERSRAHRQSLRGDRENVHKTRKRSIEEVAQTSTSTLLPTSMPLLAAFLNSRVDFTPCCASTMGQACENTTTEPSQPQEDGQRLRPLMDRNHRHRVRKIKRSTRKRNNSSSQNNPETKDNQSNAENCNSSTNVHFAKSFDDTSDGAIHCFMDEYGNWMSYTFDKNGCARVQAQPIPLPEKEDGTRINRVTPTDTAADNSQETAGEGSCGSLESEAGNSESLAKTKRGDSLDRSSSNQGSNNPLLSSSNNVSTVVPINTNTSNKRFYVFDGGTGTHTDQPRSPVAYVTDSLLEQIEAERQSRMGLPSMHINLLMREQRAQQQAQQPAVETASTNNVSSMMPAIGEISEDNVEIHFRNTISKLIDEIGKMNQPKPPPDQPKGYYKYKLSKCMEVKVTMDRLKLMALFDRNLTFSETLITILLAVMVSVLGSMVLSLGFYRDIYAFWFCFIIAGSQYSLLKSVQPDSASPVHGFNKMVLFSRPVYFCLCTALLCGVHTYMQQSGAPSDEHSRSKRSAVEMKPLTIYGFQMNERDFLYVVQEILSKFLLFFPLAFSLGLFPQVNTFLMYLLEQIDMHIFGGNATSSLSAAVYCVARSIAAVCILYGFAYSGLIEGKKSQHQKHNILFSIFCGLLVPISYHLSRSASDYTHIWNLIKKHLLPPELYVVHGPECAPEPDKTEPSLLADDKKDGSESNISKQNSIGSSASKINFSSETNIARTQKRSHASSASSLKMDPRGDTMNSTTSLRTDPTAEAEDKSQDSMNTSKQDNTDKPDEEDMEDPLPKKLQATINARLKNDVIVCTFLGLFVFGLHCTTVFTTLKPQLNTVLWIIAGILGWILHYLLPQLRKQQPWLCLASPVLKQHEHAQYEVTEPAKVMLFEKLFVYLCFVERNVVYPAVVVAATAQDAPALALKYGDAVGALLVCVCALKCLRHAYSEPDSQYLIVVFAVLIFQKDLSSRGTSETFLVDYFVTAIIFSKVYEFLLKVQFVVTYIAPWQITWGSAFHAFAQPFSVPHSAMLFLQAALSALISSPLTPALGSAIFMTSYVRPIKFWERDYNTKRVDQSNTRLSSQLERNLGSDDNNLNSIFYEHLTRSLQHYLCGDLMLGRWGQVQQGDCFVLASDYLNCLVHIVEMGNGLVSFQLRGLEFRGTYCQQREVEAISEGPEDNSGKINSFSFIKTSFYNI

Summary

Uniprot
A0A2A4JPK7   A0A3S2PDE6   A0A194PD80   A0A0N1IGZ3   A0A212ENL9   A0A2H1W1V7   + More
A0A1E1WBY9   A0A0L7KXU3  
Pubmed
26354079    22118469    26227816   
EMBL
NWSH01000928    PCG73514.1    RSAL01000088    RVE48182.1    KQ459606    KPI90963.1    + More
KQ460326    KPJ15663.1    AGBW02013630    OWR43088.1    ODYU01005698    SOQ46812.1    GDQN01006561    JAT84493.1    JTDY01004709    KOB67854.1   
Proteomes
UP000218220    UP000283053    UP000053268    UP000053240    UP000007151    UP000037510    + More
Pfam
PF05041   Pecanex_C
Interpro
IPR039797   Pecanex        + More
IPR007735   Pecanex_C       
ProteinModelPortal
A0A2A4JPK7   A0A3S2PDE6   A0A194PD80   A0A0N1IGZ3   A0A212ENL9   A0A2H1W1V7   + More
A0A1E1WBY9   A0A0L7KXU3  

Ontologies

KEGG
101738614    no KO assigned | (RefSeq) pecanex-like protein 1
GO
GO:0016021  
PANTHER
PTHR12372  

Topology

Length:
2020
Number of predicted TMHs:
11
Exp number of AAs in TMHs:
243.004070000001
Exp number, first 60 AAs:
24.21193
Total prob of N-in:
0.07919
POSSIBLE N-term signal
sequence
outside
1  -  32
TMhelix
33  -  52
inside
53  -  56
TMhelix
57  -  74
outside
75  -  1252
TMhelix
1253  -  1275
inside
1276  -  1312
TMhelix
1313  -  1335
outside
1336  -  1381
TMhelix
1382  -  1404
inside
1405  -  1424
TMhelix
1425  -  1447
outside
1448  -  1456
TMhelix
1457  -  1476
inside
1477  -  1632
TMhelix
1633  -  1655
outside
1656  -  1658
TMhelix
1659  -  1678
inside
1679  -  1816
TMhelix
1817  -  1839
outside
1840  -  1853
TMhelix
1854  -  1876
inside
1877  -  2020
 
 

Population Genetic Test Statistics

Pi
24.78038
Theta
16.812271
Tajima's D
-1.425484
CLR
2851.626297
CSRT
0.0701464926753662
Interpretation
Uncertain
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