Silkworm Genome Informatics Database

Gene

KWMTBOMO10743

Pre Gene Modal

BGIBMGA008407

Annotation

PREDICTED:_pecanex-like_protein_1_[Bombyx_mori]

Location

Bomo_Chr18(-):2240887-2253730 View in EpiBrowser

Location in the cell

Mitochondrial Reliability : 1.272 Nuclear Reliability : 1.303

CDS

ATGCTGCAGGTGTTCGACTTCCGGAAGGTGCTGCTCACCTACTACGTCAAGAGCATCATTTACTACACGATACAGTCGAGTAAGCTAGAAGAGTGGCTGGCCTCTCCAACAATAGCCGAGGCTTTGAAACCAATAAATGAGAGAAACTTCGTCGACTTGGATCCAATATTCAATGTTAACCTGGATGAGGATTACGATTTTCGAGCCTCCGGGATCACAAAGAGCAAGTTCGTGTCGGTGTACGGCGAATGGGTGTCGGTGTGTGCGGCGCGGCGGGGCGGGGCGGGGGGCAGGCGGCGCGGCGCGCGGGACGGCTCGCTGGTGGCGCTGTGCTTCGCGCTCAGCCTGCTCGGCCGACGGGCGCTCGCCGCTGCACAGCACCTCTCCGCCTCCAGCGTGGAGTTCTTCCTGTACGGGCTGCACTCGCTGTTCAAGGGCGACTTCCGCATCACGTGCGCGCGCGACGAGTGGGTGTTCACCGACATGGCGCTGCTGCACGCGGTGCTGGCGCCCGCCGTGCGCATGGCGCTCAAGCTGCACCAGGATCACTTCATGTTCCCGGAGGAGTACAGCAGCAGCTCGGCTCTGTACGCGGCCATCTCCGCGCACTCGCAGCGCCTCGTCATCTGCCACGAGGCGGCGCCCGCCTGGCGCTACAACGTGCTGCGGGGCGCGCCGCACCTCCTGGCGCTCAGACACGTGATGGACGAGGGCATCGACGACTACAAAATAATAATGCTGAACAAACGGCACCTCGGCTTCCGGGTCATCAAGCTGAACCGGGAGTGCGTCCGCGGGCTGTGGGCCGGCCAGCAGCAGGAGCTGGTCTACCTGCGGAACCGGAACCCGGAGAGGGGCTCCATACAGAACGCCAAGCAGGCCCTGAGGAACATAATCAACTCGTCGTGCGACCAGCCCATAGGGTACCCCATCTACGTGTCGCCGCTCACCACCTCGTACGCGGACACGTCGCCGCCCGTGCGCCGCCTGCTGGGCGCCGCCGTGTCCGCGCGCGGCATCCGGCGCCGGCTCGCGCAGCTGTGGCGGCGCGTGCGGCGCCGCTGCGGCGAGGGCTGCTCCAGCGGCGCTGCGTGCGAGGCGGGCGCGGGGGGGGAGCCGCGCACGCCAGCCCCGCCCCCCGCGCGCACCTCACTTGCCGGCACGCGAGGCAGCCTGGCCAGCGCCGGCAAGCCCGCGTCCACGCTGGCGTCGCTGGCGGGGCTGCTGCGGGAGCACTCGCACGAGCGCGCGCTGGAGGAGGCCGCAGTTTATACGGAAACGGTCGAGAGCCGGCGCCGCAGCGAAGATCGGTCTTCAGCCGGGCGGAGAGAGAAGGCGCCGCGACCCCGGGCGCACCCGCACCAGAGTGACGGCAGGAGGATGCGACGTGAGCGAGCTCTGCCGGCTTCCTTCCGCCTGCTAGCAGCCGATGCTGCTCACTCGCACGCGCACGACCTGCCGAGCACCGGGGGCAGCAACTGGGAGTGCGGCCCGCGCGAACAGCCCCGGAGAGCCGCCAGTGTCAAGGTCACGTGCGGCGAGGACGAGTCCTCCCTGGAGGACGTGGCGGCCGGCCTGGACCTGTCCCTCTCGCTGCCCGACTGCAAGATCATAGCCAACAGGAATGCCAGATTTTTCATAAACGAAGGCACATCGAAGGACCTCTCGAAGATAACCAGAGAGATCCGCCACGAGAGGGAGAGCCACCGCGGGCTCGCCGGCCGCTACACGGAGCGCCCCGACGCGCCGCCCGCCGACCGGGACGCCGCACTCAAGAAGGACAGCAAAAAGGAACCGAAAAACAAGGAGATAAAGACTAAAATCAAACGTTCCGAATCTGGCAGGAGCTCTGGGCGCTCCTCGGTGAGCGTGGGCAGCAAGGTGCTGATCGTGGAGCCGCTGGGCGTGTACGACTGCATCAACCTGGGCCGCCGCATCGACGTGCACTGGCCCTGCGACCTGCAGCGCCTGCGCGGGGGGCGCAGCGCCTGGGGCGCCTGGGTGCCCGCGCCCGGCATGGACGGACTGGTGGTGCACAAGTGGACGCCGAACCACAGAGACCCGAAGCTGAGGTCGCACGTCGATAAAACGATCCTCCTCGTGCAAATCGACGACAAGTACGTCCCGATAGCCGAGAACTGCGTCCACGACCTCGGCGATGAAGTGTGA

Protein

MLQVFDFRKVLLTYYVKSIIYYTIQSSKLEEWLASPTIAEALKPINERNFVDLDPIFNVNLDEDYDFRASGITKSKFVSVYGEWVSVCAARRGGAGGRRRGARDGSLVALCFALSLLGRRALAAAQHLSASSVEFFLYGLHSLFKGDFRITCARDEWVFTDMALLHAVLAPAVRMALKLHQDHFMFPEEYSSSSALYAAISAHSQRLVICHEAAPAWRYNVLRGAPHLLALRHVMDEGIDDYKIIMLNKRHLGFRVIKLNRECVRGLWAGQQQELVYLRNRNPERGSIQNAKQALRNIINSSCDQPIGYPIYVSPLTTSYADTSPPVRRLLGAAVSARGIRRRLAQLWRRVRRRCGEGCSSGAACEAGAGGEPRTPAPPPARTSLAGTRGSLASAGKPASTLASLAGLLREHSHERALEEAAVYTETVESRRRSEDRSSAGRREKAPRPRAHPHQSDGRRMRRERALPASFRLLAADAAHSHAHDLPSTGGSNWECGPREQPRRAASVKVTCGEDESSLEDVAAGLDLSLSLPDCKIIANRNARFFINEGTSKDLSKITREIRHERESHRGLAGRYTERPDAPPADRDAALKKDSKKEPKNKEIKTKIKRSESGRSSGRSSVSVGSKVLIVEPLGVYDCINLGRRIDVHWPCDLQRLRGGRSAWGAWVPAPGMDGLVVHKWTPNHRDPKLRSHVDKTILLVQIDDKYVPIAENCVHDLGDEV

Uniprot

A0A3S2PDE6 A0A0N1IGZ3

Pubmed

26354079

EMBL

RSAL01000088 RVE48182.1 KQ460326 KPJ15663.1

Proteomes

UP000283053 UP000053240

Pfam

PF05041 Pecanex_C

Interpro

IPR039797 Pecanex + More
IPR007735 Pecanex_C

ProteinModelPortal

A0A3S2PDE6 A0A0N1IGZ3

KEGG

101738614 no KO assigned | (RefSeq) pecanex-like protein 1

GO

GO:0016021 GO:0005549 GO:0007608 GO:0016020 GO:0005515 GO:0016491 GO:0046872 GO:0051537 GO:0003824

PANTHER

PTHR12372

Length:

722

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.563779999999999

Exp number, first 60 AAs:

0.05276

Total prob of N-in:

0.01772

outside

1 - 722

Pi

228.957514

Theta

168.87624

Tajima's D

1.526006

CLR

114.550745

CSRT

0.794460276986151

Interpretation

Uncertain

Sequence

Summary

Ontologies

Topology

Population Genetic Test Statistics