SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO10741
Annotation
PREDICTED:_putative_odorant_receptor_85d_[Bombyx_mori]
Full name
Odorant receptor      
Location in the cell
Mitochondrial   Reliability : 1.016 PlasmaMembrane   Reliability : 1.324
 

Sequence

CDS
ATGGCCGGTAGACAGATAAAGAGCTCTAACATTTCTGACGCCGCTTACAACAGCCTCTGGTATGAAGGCGACCTCAAACTTAGAAAACTAATGTTGTTTATCATCACTCGATCACAAAATCCGTGCTATTTATCTGCATTGGGATTTTCAAATATGACTCTACGATCATTTTCAAAGATTATGAGCACAGCATGGACGTATCTGTCGCTTCTTATTCAAGTTTATGAAGGAAATTAA
Protein
MAGRQIKSSNISDAAYNSLWYEGDLKLRKLMLFIITRSQNPCYLSALGFSNMTLRSFSKIMSTAWTYLSLLIQVYEGN

Summary

Similarity
Belongs to the insect chemoreceptor superfamily. Heteromeric odorant receptor channel (TC 1.A.69) family.
EMBL
NWSH01000229    PCG78177.1    PCG78178.1    KF768688    AIG51882.1    KY707205    + More
AVF19647.1    NWSH01003963    PCG65612.1    MG546607    AYD42230.1    GCVX01000222    JAI18008.1    KY283629    AST36288.1    KY283630    AST36289.1    KX084473    ARO76428.1    KT588125    AOE48035.1    GDKB01000057    JAP38439.1    AB472105    BAH66322.1    BK005933    DAA05983.1    KM597232    AIT69909.1    GCVX01000221    JAI18009.1    KM655569    AIT72018.1    KU598912    ANZ03158.1    KM678333    AJE25906.1    MG816621    AXF48806.1    KM892407    AJF23822.1    KY283759    AST36418.1    GENK01000093    JAV45820.1    GEDO01000053    JAP88573.1    KY707214    AVF19656.1    KX585353    ARO70246.1    GDKB01000058    JAP38438.1    KX585333    ARO70226.1    KX655962    AOG12911.1    KQ459166    KPJ03567.1    KY283680    AST36339.1    KY225501    ARO70513.1    MH193982    AZB49428.1    KY283758    AST36417.1    ODYU01003236    SOQ41732.1    LN885103    CUQ99392.1    LN885127    CUQ99416.1    ODYU01001579    SOQ37997.1    LN885124    CUQ99413.1    GENK01000110    JAV45803.1    KR935758    ALM26250.1    KZ149944    PZC76857.1    KY399274    AQQ73505.1    KP975146    ALT31665.1    KY225491    ARO70503.1    KF487661    AII01059.1    AJ487482    CAD31853.1    KF487706    AII01104.1    LC002717    BAR43465.1    NWSH01000040    PCG80355.1    GEDO01000041    JAP88585.1    GEDO01000035    JAP88591.1    AB472104    BAH66321.1    KP975143    ALT31662.1    ODYU01000323    SOQ34863.1    LC002719    BAR43467.1    LN885105    CUQ99394.1    LC002739    BAR43487.1    LC002720    BAR43468.1    KY707219    AVF19661.1    KY707210    AVF19652.1    LN885132    CUQ99421.1    KC960456    AGY14567.1    MG546644    AYD42267.1    KX656010    AOG12959.1    KY399290    AQQ73521.1    GDQN01002308    JAT88746.1    KJ542666    AJD81550.1    AJ748327    CAG38113.1    KY707182    AVF19624.1    KT588107    AOE48017.1    RSAL01000029    RVE51760.1    JX982543    AGK90018.1    EU818704    ACF32963.1    MG816622    AXF48807.1    RSAL01000173    RVE45074.1    KT962963    AND95946.1    KF768666    KZ150109    AIG51860.1    PZC73368.1    JX982529    AGK90004.1    KU598902    ANZ03148.1    KT962962    AND95945.1    KX585334    ARO70227.1    JX982526    AGK90001.1    JX982540    AGK90015.1    PZC73369.1    PCG80352.1    ODYU01000356    SOQ34994.1    KX655969    AOG12918.1    GENK01000060    JAV45853.1    AJWK01030597    KR935738    ALM26230.1    GENK01000063    JAV45850.1    KR935710    ALM26202.1    KT588128    AOE48038.1    KX585336    ARO70229.1   
Pfam
PF02949   7tm_6
Interpro
IPR004117   7tm6_olfct_rcpt       
PDB
6C70     E-value=0.00241024,     Score=90

Ontologies

Topology

Subcellular location
Cell membrane  
Length:
78
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
2.01445
Exp number, first 60 AAs:
0.81278
Total prob of N-in:
0.58221
inside
1  -  78
 
 

Population Genetic Test Statistics

Pi
377.228985
Theta
197.377956
Tajima's D
2.868006
CLR
0.590575
CSRT
0.972551372431378
Interpretation
Uncertain
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