Gene

KWMTBOMO10740

Pre Gene Modal

BGIBMGA008414

Annotation

PREDICTED:_thioredoxin?_mitochondrial_isoform_X1_[Bombyx_mori]

Location

Bomo_Chr18(+):2188091-2191638      View in EpiBrowser

Full name

Thioredoxin      

Location in the cell

Cytoplasmic   Reliability : 1.283 Mitochondrial   Reliability : 1.337

CDS

ATGTCTAATGCAATATGCAAAAGTTTGAGATCGCCAGTAAGGAATCTGGCATCTTTGAAGAAAGCCATCTCAACCTCACTAGTACATAATGAGACTATATTAGTTAGGAATAATGAAGAGTTTATTAATAAGGTCATGAACAATGATAAACCTGTGATAGTGAATTTCCATGCGGAGTGGTGTGAGCCCTGTAAAATACTGACACCACAGCTGAAGCAACTAATCGAACCCTTGACAGACCTAGATCTAGCTGTTGTGGATGTCGAAGACAATGCCGATTTAGTTCACACTTTTGAGGTAAAGGCGGTTCCCGCAGTTATAGCAATAAAGAACGGATTAATAGTGGACAAGTTCATAGGCTTAGTGGAAACCGATATGATCACCTGTCTTATTAACAGGATGTCGGGTAAAAAGAAGGAGGGCACATAG

Protein

MSNAICKSLRSPVRNLASLKKAISTSLVHNETILVRNNEEFINKVMNNDKPVIVNFHAEWCEPCKILTPQLKQLIEPLTDLDLAVVDVEDNADLVHTFEVKAVPAVIAIKNGLIVDKFIGLVETDMITCLINRMSGKKKEGT

Similarity

Belongs to the thioredoxin family.

Uniprot

A0A3S2NDC0   A0A2H1WGI2   A0A0N0PD36   A0A194PE47   A0A2A4K1N5   S4P957   + More
A0A212ENM7   A0A0L7LQK3   V5GMS3   A0A1Y1JW39   Q16V30   A0A139WIP1   J3JWS0   A0A023EEG7   T1D5A7   A0A067R8G5   T1E8Z7   A0A2M3Z9E1   A0A2M4ANJ5   W5JKW6   A0A0C9QRV3   U5EUH6   A0A182ILN9   A0A232ET98   A0A182P8P5   A0A182XXB0   K7J324   A0A195FC53   A0A195BAY8   A0A158NK60   B0XDN0   A0A195C3Y9   A0A195EHV0   A0A182NFU5   A0A182QTW7   A0A1B6K934   A0A182K9S9   A0A182UYD3   A0A182U647   A0A182XKE2   Q7Q9B5   A0A182HJK2   A0A182VXS2   A0A182S5K7   A0A1B6F0G8   A0A026WJW8   E2B0H4   A0A2J7PNM7   A0A1B6H5D7   A0A2A3ED70   W8B8E3   A0A0K8WCR7   A0A1Q3FI12   A0A1B6DS56   A0A034VR18   T1P7S0   A0A154PME8   A0A182MCH4   B4JK44   A0A1I8P4J4   A0A1L8EC46   A0A069DVJ4   A0A0P4VHJ6   A0A0K8TN94   A0A224XQ62   A0A182FP82   E0VM33   A0A0A9Y586   A0A0L0BW80   A0A1J1HKR8   B4MAG5   A0A2S2QN04   T1HE79   S6CDI3   A0A1Q3FI48   B4NPW0   A0A0M4EV21   J9K763   O76877   A0A2H8TG65   B4R2P1   B3P9H3   B3MRE0   A0A2S2NWP1   B4PXP1   A0A1W4VFA9   Q29IZ8   B4GTM2   A0A3B0JW43   A0A0L7QNI6   A0A2R7X4U2  

Pubmed

26354079    23622113    22118469    26227816    28004739    17510324    + More
18362917    19820115    22516182    23537049    24945155    26483478    24330624    24845553    20920257    23761445    28648823    25244985    20075255    21347285    12364791    14747013    17210077    24508170    30249741    20798317    24495485    25348373    25315136    17994087    26334808    27129103    26369729    20566863    25401762    26823975    26108605    10731132    12537568    12537572    12537573    12537574    16110336    17569856    17569867    26109357    26109356    17550304    15632085   

EMBL

RSAL01000088    RVE48183.1    ODYU01008506    ODYU01008507    SOQ52171.1    SOQ52172.1    + More
KQ460326    KPJ15664.1    KQ459606    KPI90964.1    NWSH01000229    PCG78181.1    GAIX01006952    JAA85608.1    AGBW02013631    OWR43083.1    JTDY01000320    KOB77710.1    GALX01005569    JAB62897.1    GEZM01099054    JAV53529.1    CH477605    EAT38398.1    KQ971338    KYB27878.1    APGK01017607    BT127688    KB740045    KB631729    AEE62650.1    ENN81860.1    ERL85624.1    JXUM01042666    JXUM01049291    GAPW01005836    KQ561598    KQ561333    JAC07762.1    KXJ78042.1    KXJ78938.1    GALA01000613    JAA94239.1    KK852867    KDR14721.1    GAMD01002308    JAA99282.1    GGFM01004392    MBW25143.1    GGFK01009039    MBW42360.1    ADMH02000799    GGFL01004436    ETN65017.1    MBW68614.1    GBYB01003357    GBYB01003358    JAG73124.1    JAG73125.1    GANO01003875    JAB55996.1    NNAY01002301    OXU21585.1    KQ981693    KYN37629.1    KQ976537    KYM81385.1    ADTU01018716    DS232769    EDS45538.1    KQ978344    KYM94891.1    KQ978881    KYN27830.1    AXCN02000248    GEBQ01032052    GEBQ01017224    JAT07925.1    JAT22753.1    AAAB01008904    EAA09650.2    APCN01002178    GECZ01026178    GECZ01003994    JAS43591.1    JAS65775.1    KK107182    QOIP01000011    EZA55956.1    RLU17177.1    GL444608    EFN60816.1    NEVH01023380    PNF17943.1    GECU01037805    JAS69901.1    KZ288279    PBC29677.1    GAMC01013204    GAMC01013202    JAB93353.1    GDHF01029745    GDHF01003336    GDHF01001360    JAI22569.1    JAI48978.1    JAI50954.1    GFDL01007834    JAV27211.1    GEDC01008786    GEDC01000736    JAS28512.1    JAS36562.1    GAKP01014934    JAC44018.1    KA644572    AFP59201.1    KQ434978    KZC13013.1    AXCM01001599    CH916370    EDV99946.1    GFDG01002696    JAV16103.1    GBGD01003560    JAC85329.1    GDKW01003431    JAI53164.1    GDAI01001764    JAI15839.1    GFTR01001789    JAW14637.1    DS235286    EEB14439.1    GBHO01015392    GBHO01015389    GBHO01015388    GBHO01015387    GBRD01006620    GBRD01004173    GBRD01004172    GDHC01017465    GDHC01013510    JAG28212.1    JAG28215.1    JAG28216.1    JAG28217.1    JAG59201.1    JAQ01164.1    JAQ05119.1    JRES01001349    KNC23489.1    CVRI01000002    CRK86833.1    CH940655    EDW66224.1    GGMS01009956    MBY79159.1    ACPB03013340    AB842168    BAN67625.1    GFDL01007830    JAV27215.1    CH964291    EDW86185.1    CP012528    ALC49726.1    ABLF02025030    ABLF02025031    AE014298    AY119573    AL023893    AAF45615.1    AAM50227.1    CAA19652.1    GFXV01001225    MBW13030.1    CM000366    EDX16841.1    CH954183    EDV45469.1    CH902622    EDV34345.1    GGMR01008769    MBY21388.1    CM000162    EDX00894.1    CH379063    EAL32505.1    CH479190    EDW25892.1    OUUW01000011    SPP86274.1    KQ414851    KOC60190.1    KK857085    PTY26799.1   

Proteomes

UP000283053    UP000053240    UP000053268    UP000218220    UP000007151    UP000037510    + More
UP000008820    UP000007266    UP000019118    UP000030742    UP000069940    UP000249989    UP000027135    UP000000673    UP000075880    UP000215335    UP000075885    UP000076408    UP000002358    UP000078541    UP000078540    UP000005205    UP000002320    UP000078542    UP000078492    UP000075884    UP000075886    UP000075881    UP000075903    UP000075902    UP000076407    UP000007062    UP000075840    UP000075920    UP000075901    UP000053097    UP000279307    UP000000311    UP000235965    UP000242457    UP000095301    UP000076502    UP000075883    UP000001070    UP000095300    UP000069272    UP000009046    UP000037069    UP000183832    UP000008792    UP000015103    UP000007798    UP000092553    UP000007819    UP000000803    UP000000304    UP000008711    UP000007801    UP000002282    UP000192221    UP000001819    UP000008744    UP000268350    UP000053825   

PRIDE

O76877   

Pfam

PF00085   Thioredoxin        + More
PF06565   DUF1126

Interpro

IPR017937   Thioredoxin_CS        + More
IPR013766   Thioredoxin_domain       
IPR036249   Thioredoxin-like_sf       
IPR005746   Thioredoxin       
IPR040193   EFHC1/EFHC2/EFHB       
IPR010554   DUF1126       
IPR006602   Uncharacterised_DM10       
IPR011992   EF-hand-dom_pair       

SUPFAM

SSF52833   SSF52833        + More
SSF47473   SSF47473       

ProteinModelPortal

A0A3S2NDC0   A0A2H1WGI2   A0A0N0PD36   A0A194PE47   A0A2A4K1N5   S4P957   + More
A0A212ENM7   A0A0L7LQK3   V5GMS3   A0A1Y1JW39   Q16V30   A0A139WIP1   J3JWS0   A0A023EEG7   T1D5A7   A0A067R8G5   T1E8Z7   A0A2M3Z9E1   A0A2M4ANJ5   W5JKW6   A0A0C9QRV3   U5EUH6   A0A182ILN9   A0A232ET98   A0A182P8P5   A0A182XXB0   K7J324   A0A195FC53   A0A195BAY8   A0A158NK60   B0XDN0   A0A195C3Y9   A0A195EHV0   A0A182NFU5   A0A182QTW7   A0A1B6K934   A0A182K9S9   A0A182UYD3   A0A182U647   A0A182XKE2   Q7Q9B5   A0A182HJK2   A0A182VXS2   A0A182S5K7   A0A1B6F0G8   A0A026WJW8   E2B0H4   A0A2J7PNM7   A0A1B6H5D7   A0A2A3ED70   W8B8E3   A0A0K8WCR7   A0A1Q3FI12   A0A1B6DS56   A0A034VR18   T1P7S0   A0A154PME8   A0A182MCH4   B4JK44   A0A1I8P4J4   A0A1L8EC46   A0A069DVJ4   A0A0P4VHJ6   A0A0K8TN94   A0A224XQ62   A0A182FP82   E0VM33   A0A0A9Y586   A0A0L0BW80   A0A1J1HKR8   B4MAG5   A0A2S2QN04   T1HE79   S6CDI3   A0A1Q3FI48   B4NPW0   A0A0M4EV21   J9K763   O76877   A0A2H8TG65   B4R2P1   B3P9H3   B3MRE0   A0A2S2NWP1   B4PXP1   A0A1W4VFA9   Q29IZ8   B4GTM2   A0A3B0JW43   A0A0L7QNI6   A0A2R7X4U2  

PDB

1W89     E-value=1.17549e-20,     Score=239

KEGG

101742793    K03671 thioredoxin 1 | (RefSeq) thioredoxin, mitochondrial

GO

GO:0005623   GO:0006662   GO:0045454   GO:0015035   GO:0016021   GO:0015036   GO:0005739   GO:0003777   GO:0005871   GO:0006412   GO:0005515   GO:0016491   GO:0046872   GO:0051537   GO:0003824  

PANTHER

PTHR12086  

Length:

142

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.03746

Exp number, first 60 AAs:

0.00023

Total prob of N-in:

0.35709

outside

1  -  142

 

 

Pi

343.216208

Theta

218.912785

Tajima's D

2.766592

CLR

0.116002

CSRT

0.965901704914754

Interpretation

Uncertain