SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO10732  Validated by peptides from experiments
Pre Gene Modal
BGIBMGA008411
Annotation
PREDICTED:_MAGUK_p55_subfamily_member_5-like_[Bombyx_mori]
Location in the cell
Cytoplasmic   Reliability : 1.58 Mitochondrial   Reliability : 1.597 Nuclear   Reliability : 1.112
 

Sequence

CDS
ATGCGCGGCAAGTCCGTGCACGAGGTGTGCCAGGTGCTGGGCGCGCTGTCGGGCACGTTGTGTGTGGTGCTAGCGCCGCGCGCACGATGCGTGCGGGCCGCGCCGCCGCCGCGCGTGCTGCACGTGCGCGCGCACTTCGACTACGATCCGGAGGACGACGTGTACATCCCCTGCAGGGAGCTCGGTATTAGCTTCCAAAAAGGTGACGTGTTACACGTGATAAGTCGCGAAGATCCGAACTGGTGGCAGGCGTACAGGGAAGGTGAAGAGGACCAGACCCTCGCCGGACTAATACCGAGTCAAGCGTTCCAACACCAACGGGAAGCAATGAAGTTAACGTTGGCCGGCGAAGTGGCAGCCCGCGACAAGCCAAGGAAAGGTGGCACTCTGCTGTGCGCGAGAAAACCGCCGCGCAAGAAGAAGGGCAAGAAGGCGACCAGTGAAGCTGGATACCCTCTGTACTCGACGTCTGGCGGAGACGAATACGAACAAGAAGAGATCCTGACGTACGAAGAGGTAGCACTGTACTATCCGCGCGCGTCACACAAGCGACCTATAGTGCTGATAGGGCCACCCAACATAGGCCGACACGAACTGCGGCAGAGACTCATGGAGGACGGCTCGAGGTTTGCCGCAGCCGTGCCGCACACGTCGAGGCCGCGTAAGGACCACGAAGTGCCCGGCCAGGATTACCACTTCATATCGCGCACGCAGTTCGAAGCCGACATACTGAACAGAAAATTCGTCGAGCATGGAGAATATGAAAAGGCTTACTACGGCACGTCATTGGAAGCGATACGCGAAGTAGTGAACTCCGGTAAAATCTGCGTGCTGAACCTGCATCCTCAGTCGCTGAAGATCCTGCGTAACTCCGACCTCAAGCCCTACACCGTGTTCGTAGCACCGCCCAGCCTCGAGAAATTACGACAGAAGAAGATCCGGAACGCGGAGGCATTCAAGGAGGAGGAGCTCAAAGAAATAATTGCAACTGCAAGAGATATGGAATTGAGATGGGGCCATTTATTCGACATGATAATAATCAATAACGACACACAACGTGCCTACCAGCAGCTGTTGAACGAGATCAACAGCTTGGAGCGCGAGCCGCAGTGGGTGCCCGCTCACTGGCTCAAGCACACCTAG
Protein
MRGKSVHEVCQVLGALSGTLCVVLAPRARCVRAAPPPRVLHVRAHFDYDPEDDVYIPCRELGISFQKGDVLHVISREDPNWWQAYREGEEDQTLAGLIPSQAFQHQREAMKLTLAGEVAARDKPRKGGTLLCARKPPRKKKGKKATSEAGYPLYSTSGGDEYEQEEILTYEEVALYYPRASHKRPIVLIGPPNIGRHELRQRLMEDGSRFAAAVPHTSRPRKDHEVPGQDYHFISRTQFEADILNRKFVEHGEYEKAYYGTSLEAIREVVNSGKICVLNLHPQSLKILRNSDLKPYTVFVAPPSLEKLRQKKIRNAEAFKEEELKEIIATARDMELRWGHLFDMIIINNDTQRAYQQLLNEINSLEREPQWVPAHWLKHT

Summary

Similarity
Belongs to the MAGUK family.
EMBL
BABH01001504    ODYU01012998    SOQ59591.1    NWSH01000229    PCG78179.1    KZ150136    + More
PZC72985.1    PCG78207.1    PCG78180.1    RSAL01000088    RVE48191.1    KQ459606    KPI90973.1    GFDF01006752    JAV07332.1    GFDF01006751    JAV07333.1    AJWK01026607    AJWK01026608    AJWK01026609    AJWK01026610    AJWK01026611    AJWK01026612    GFDF01006865    JAV07219.1    GDAI01000709    JAI16894.1    AXCM01000847    AAAB01008859    EGK96796.1    EAA08186.6    GFDL01003730    JAV31315.1    EGK96793.1    AXCN02001476    GFDL01009180    JAV25865.1    GANO01000410    JAB59461.1    APCN01000251    APCN01000252    EGK96792.1    EGK96795.1    DS231849    EDS36902.1    EGK96794.1    JXJN01000685    UFQS01001622    UFQT01001622    SSX11641.1    SSX31206.1    GBXI01004292    JAD10000.1    CM000162    KRK06685.1    UFQT01000095    SSX19675.1    KA649271    AFP63900.1    GGFM01006692    MBW27443.1    GGFL01001140    MBW65318.1    GBXI01006703    JAD07589.1    GGFM01001124    MBW21875.1    GGFM01001122    MBW21873.1    GGFM01001112    MBW21863.1    GGFJ01001619    MBW50760.1    GAMC01020724    GAMC01020722    JAB85831.1    KRK06686.1    FX985702    BBA84440.1    GBXI01005196    JAD09096.1    GGFK01002373    MBW35694.1    CCAG010022956    CCAG010022957    CCAG010022958    EDX02276.2    CVRI01000030    CRK92533.1    GBXI01002109    JAD12183.1    ADMH02002092    ETN59343.1    GAMC01020725    GAMC01020723    JAB85830.1    AE014298    AHN59481.1    CH954180    KQS30139.1    KQS30138.1    KQS30134.1    GECU01019896    JAS87810.1    AAF46351.2    AGB95172.1    AF414117    AAL40935.1    GECZ01019694    JAS50075.1    GECZ01023683    JAS46086.1    GECU01032402    JAS75304.1    BT099747    AAF46350.2    ACV82446.1    AFH07289.1    KRK06683.1    KQS30142.1    AHN59482.1    AAF46349.4    AAS65284.1    KRK06688.1    KQS30137.1    EDV46843.2    GGFK01003946    MBW37267.1    SSX11643.1    SSX31208.1    BT011088    AAR82754.1    KQS30135.1    GGFK01004022    MBW37343.1    KK853150    KDR10611.1    GECU01009168    JAS98538.1   
Pfam
PF00595   PDZ        + More
PF07653   SH3_2
PF00625   Guanylate_kin
PF02828   L27
PF17820   PDZ_6
Interpro
IPR001478   PDZ        + More
IPR020590   Guanylate_kinase_CS       
IPR036034   PDZ_sf       
IPR027417   P-loop_NTPase       
IPR036028   SH3-like_dom_sf       
IPR031185   MPP5       
IPR008144   Guanylate_kin-like_dom       
IPR001452   SH3_domain       
IPR008145   GK/Ca_channel_bsu       
IPR035601   MPP5_SH3       
IPR004172   L27_dom       
IPR014775   L27_C       
IPR036892   L27_dom_sf       
IPR041489   PDZ_6       
SUPFAM
SSF50044   SSF50044        + More
SSF52540   SSF52540       
SSF50156   SSF50156       
SSF101288   SSF101288       
PDB
4WSI     E-value=3.90953e-67,     Score=647

Ontologies

Topology

Length:
380
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
1.68444
Exp number, first 60 AAs:
1.68444
Total prob of N-in:
0.10472
outside
1  -  380
 
 

Population Genetic Test Statistics

Pi
326.942849
Theta
195.90388
Tajima's D
2.522815
CLR
0.117549
CSRT
0.944802759862007
Interpretation
Uncertain
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