Silkworm Genome Informatics Database

Gene

KWMTBOMO10730

Pre Gene Modal

BGIBMGA008410

Annotation

PREDICTED:_MAGUK_p55_subfamily_member_5-like_[Bombyx_mori]

Location

Bomo_Chr18(+):1803879-1810990 View in EpiBrowser

Location in the cell

Nuclear Reliability : 3.641

CDS

ATGCCATTAATTTCCAGGCCCCGAAGACGATCCGGCTCCAGCATCGTGGTGCTGGGCGCTGAGGAGGAGAAACGCCCGCCCCCGGATGACGACAAAGAGATGCTCTCGCTTTCTTCTGATACCGGTCCCCACCGCGAGATGGCGGTGGATGTGCCGGACAGTTTCATCGCTCGGAACAAAACTCCCCCCCGGTACCCGCCGCCGCGGCCCCCCCAGGTACGTCTCCGTCCGTGCCGGGACGAGGATCCCCTCCTCTCCTCCGGCGGCTCCGGCACCAGTTTCGGCAGTAAACAAAGCACAGTTCAGACCCTCGATCTCTCAGGGCCCAGCTCCGATAACTCGGGTTCGTTCAAGAACGCTATCGAGTTATTGTCCCTGCCCCAGAGTTCCGAAGGTTCGGGGGCCAGTTTTGGAAGCAAAAAAAGCAAGGGCTCCGCAGAGACAGCCAAATGCGGCGACTCTGACAGATCTGATGCGAGCGAACAAAAAATACAACTCCTCATATCGAGCGAGGACGATTCGTTGCTCGATTGCAGAGAAGGGGTCTCGTACTCCGCTAGAACTGACACGGTACTGATTAGAGAGGCGCTGTACGCGTCTTACAAGCTGCCTCCAGGGTTCGATACGACGCCGGTACTGCTCGGGAGGGAGGTGGCCGTCGACGTACCAGATACCTTCGTGCAAATCGTGAAAACAACCCCAAAATATCCAGGAACCGTGGACAGAAAGAGCGTCGCTTTTCAGGTCAATGGCACAGCTAAAACTGCGGCTCCGGCTGTGCCCCCTCGTGAGGTAGCCAGGGACGCCCCTCCTCGACCTCCTGCCCATGATGTCTCTAAAGACCAAGTGGACTCTATAAAGAAGTATCAGGTAAGTATTTTGTATGAATAA

Protein

MPLISRPRRRSGSSIVVLGAEEEKRPPPDDDKEMLSLSSDTGPHREMAVDVPDSFIARNKTPPRYPPPRPPQVRLRPCRDEDPLLSSGGSGTSFGSKQSTVQTLDLSGPSSDNSGSFKNAIELLSLPQSSEGSGASFGSKKSKGSAETAKCGDSDRSDASEQKIQLLISSEDDSLLDCREGVSYSARTDTVLIREALYASYKLPPGFDTTPVLLGREVAVDVPDTFVQIVKTTPKYPGTVDRKSVAFQVNGTAKTAAPAVPPREVARDAPPRPPAHDVSKDQVDSIKKYQVSILYE

Similarity

Belongs to the MAGUK family.

Uniprot

H9JFW3 A0A2A4IUN4 A0A2W1BJI3 A0A0N0PD76 A0A212FHP4 A0A3S2NZ21 + More
A0A194PE58

Pubmed

19121390 28756777 26354079 22118469

EMBL

BABH01001503 NWSH01006520 PCG63379.1 KZ150136 PZC72986.1 KQ460326 + More
KPJ15671.1 AGBW02008485 OWR53237.1 RSAL01000088 RVE48191.1 KQ459606 KPI90974.1

Proteomes

UP000005204 UP000218220 UP000053240 UP000007151 UP000283053 UP000053268 + More

PRIDE

H9JFW3

Pfam

PF00595   PDZ        + More
PF07653   SH3_2
PF00625   Guanylate_kin

Interpro

IPR008144   Guanylate_kin-like_dom        + More
IPR001452   SH3_domain
IPR008145   GK/Ca_channel_bsu
IPR035601   MPP5_SH3
IPR036034   PDZ_sf
IPR020590   Guanylate_kinase_CS
IPR001478   PDZ
IPR027417   P-loop_NTPase
IPR036028   SH3-like_dom_sf
IPR031185   MPP5

SUPFAM

SSF52540   SSF52540        + More
SSF50156   SSF50156
SSF50044   SSF50044

CDD

cd12036 SH3_MPP5

ProteinModelPortal

H9JFW3 A0A2A4IUN4 A0A2W1BJI3 A0A0N0PD76 A0A212FHP4 A0A3S2NZ21 + More
A0A194PE58

KEGG

101742023 K06091 MAGUK p55 subfamily member 5 | (RefSeq) MAGUK p55 subfamily member 5-like

GO

GO:0016021

PANTHER

PTHR23122:SF14

Length:

296

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0

Exp number, first 60 AAs:

0

Total prob of N-in:

0.04552

outside

1 - 296

Pi

285.018489

Theta

186.725282

Tajima's D

1.628958

CLR

0.007343

CSRT

0.814709264536773

Interpretation

Uncertain

Sequence

Summary

Ontologies

Topology

Population Genetic Test Statistics