Silkworm Genome Informatics Database

Gene

KWMTBOMO10727

Pre Gene Modal

BGIBMGA008285

Annotation

PREDICTED:_uncharacterized_protein_LOC101740406?_partial_[Bombyx_mori]

Location

Bomo_Chr18(+):1728999-1733021 View in EpiBrowser

Location in the cell

Nuclear Reliability : 3.116

CDS

ATGTATTGTCAACTATATATCGGGCACAATATAATCCAAGATGCGTTCCTCATCGCCGTGGAGGAGCAGGCCCGGCAGCGGCTACAGCGGCTGTCGGCCCTCAAGCGAATCACGCCCGTGGACATGTCCAAGCTCTCTGTAGAGTTAAACAAAAGAAAACGAACTCAACCAGAGAACAGACCTGAGCTAAACGGGTATATAGCCAATTCGACGGTCTACGTGACTTCCATTAACGAAAACGGTGCTATAGAAAGCAAGCCAACTATATCATCGCCGAAATCTCAACCTAAAGCTCTCCAAGCGAAACCAACACCGGTCATAACGAACGGAATCGACAACAAAGAGGCAATAGAAGAAGAGAGAGAAAAACACGAGAACGATCAGAGCGAGAAGAAGGAACTTAGTGACGAAAAAGATTTAAGTGTGTGCGTTGTGAATGATGTGATTAGTGATGCGTACAGTGTTGCCCGTGAGCATTTGAACAACGGCCGTAGTGAGAAACTGTTGGATCAGCCCGATCATAGGATCAGGGCCACTGCTGTCATCGAGAGTAACAAGTTGGGACCGGGAGAGAATCGGTGA

Protein

MYCQLYIGHNIIQDAFLIAVEEQARQRLQRLSALKRITPVDMSKLSVELNKRKRTQPENRPELNGYIANSTVYVTSINENGAIESKPTISSPKSQPKALQAKPTPVITNGIDNKEAIEEEREKHENDQSEKKELSDEKDLSVCVVNDVISDAYSVAREHLNNGRSEKLLDQPDHRIRATAVIESNKLGPGENR

Similarity

Belongs to the MAGUK family.

Uniprot

H9JFI8 A0A2H1VNS9 A0A2A4IX61 A0A2W1BID6 A0A0L7L9W0 A0A212FHP4 + More
A0A3S2NZ21 A0A0N0PDI1 A0A194PIQ8 A0A347ZJD4 A0A139WIS0 A0A139WIL9 A0A146LND4 A0A023F4A8 T1IQP9

Pubmed

19121390 28756777 26227816 22118469 26354079 18362917 + More
19820115 26823975 25474469

EMBL

BABH01035066 BABH01035067 ODYU01003546 SOQ42458.1 NWSH01005720 PCG64008.1 + More
KZ150136 PZC72987.1 JTDY01002027 KOB72293.1 AGBW02008485 OWR53237.1 RSAL01000088 RVE48191.1 KQ460326 KPJ15672.1 KQ459606 KPI90975.1 FX985702 BBA84440.1 KQ971338 KYB27802.1 KYB27803.1 GDHC01009760 JAQ08869.1 GBBI01002863 JAC15849.1 JH431312

Proteomes

UP000005204 UP000218220 UP000037510 UP000007151 UP000283053 UP000053240 + More
UP000053268 UP000007266

PRIDE

H9JFI8

Pfam

PF00595   PDZ        + More
PF07653   SH3_2
PF00625   Guanylate_kin
PF02828   L27
PF17820   PDZ_6

Interpro

IPR008144   Guanylate_kin-like_dom        + More
IPR001452   SH3_domain
IPR008145   GK/Ca_channel_bsu
IPR035601   MPP5_SH3
IPR036034   PDZ_sf
IPR020590   Guanylate_kinase_CS
IPR001478   PDZ
IPR027417   P-loop_NTPase
IPR036028   SH3-like_dom_sf
IPR031185   MPP5
IPR004172   L27_dom
IPR036892   L27_dom_sf
IPR014775   L27_C
IPR041489   PDZ_6

SUPFAM

SSF52540   SSF52540        + More
SSF50156   SSF50156
SSF50044   SSF50044
SSF101288   SSF101288

CDD

cd12036 SH3_MPP5

ProteinModelPortal

H9JFI8 A0A2H1VNS9 A0A2A4IX61 A0A2W1BID6 A0A0L7L9W0 A0A212FHP4 + More
A0A3S2NZ21 A0A0N0PDI1 A0A194PIQ8 A0A347ZJD4 A0A139WIS0 A0A139WIL9 A0A146LND4 A0A023F4A8 T1IQP9

KEGG

101740406 no KO assigned | (RefSeq) uncharacterized LOC101740406

GO

GO:0016301 GO:0016021

PANTHER

PTHR23122:SF14

Length:

193

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.00968999999999999

Exp number, first 60 AAs:

0.00855

Total prob of N-in:

0.13614

outside

1 - 193

Pi

70.034023

Theta

115.976607

Tajima's D

-0.693527

CLR

0.245787

CSRT

0.20313984300785

Interpretation

Uncertain

Sequence

Summary

Ontologies

Topology

Population Genetic Test Statistics