SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO10726
Annotation
PREDICTED:_uncharacterized_protein_LOC106101442_[Papilio_polytes]
Location in the cell
Nuclear   Reliability : 2.411
 

Sequence

CDS
ATGAACACGTTCAACGCTCCTACGACACAAATAAGCGGCACAATGGACAAAATGACCACAGTAAAATGTAAATCTGTCGACCTAGAAGGATACGTTATAATCGTTGTACAAACTAAAGACAATAAAGTGAAATTATATGGTTCTCCATCAGCTGGCAACTGGGACAAACTGGAGCTTGCCGACGAAATAATGGACGTTAATGAGACAAAACTTGAGGACATGTCCAGGGCTGAGGTCCTAGGGCATATACACGAGTGTATCTCTTCTTGTGTCATCAAGCTACGCGTAAAGAGGCGGAGCGAGACTAAATTACACTTATATCAGGGATGA
Protein
MNTFNAPTTQISGTMDKMTTVKCKSVDLEGYVIIVVQTKDNKVKLYGSPSAGNWDKLELADEIMDVNETKLEDMSRAEVLGHIHECISSCVIKLRVKRRSETKLHLYQG

Summary

Similarity
Belongs to the MAGUK family.
EMBL
KZ150136    PZC72988.1    NWSH01003949    PCG65637.1    RSAL01000088    RVE48191.1    + More
ODYU01010214    SOQ55181.1    KQ459606    KPI90976.1    AGBW02008727    OWR52682.1    JTDY01002027    KOB72292.1    UFQS01001622    UFQT01001622    SSX11640.1    SSX31205.1    AXCM01000847    AAAB01008859    EGK96796.1    EGK96793.1    EAA08186.6    JXUM01026014    JXUM01026015    JXUM01026016    JXUM01026017    KQ560741    KXJ81050.1    AXCN02001476    AJVK01018576    DS231849    EDS36905.1    UFQT01000095    SSX19675.1    CVRI01000030    CRK92533.1    JRES01000955    KNC26800.1    BT011047    AAR31118.1    JXJN01000690    CH479196    EDW27602.1    GL732527    EFX87597.1    CH916371    EDV92336.1    CCAG010000159    FX985702    BBA84440.1    CH379064    EAL31832.3    AE014298    AHN59482.1    OUUW01000016    SPP88873.1    GAMC01006639    GAMC01006638    JAB99916.1    AFH07288.1    CH954180    KQS30134.1    CM000162    KRK06686.1    KQS30138.1    KQS30139.1    AHN59481.1    AFH07290.1    KQS30140.1    KQS30143.1    ABC67176.2    EDX02276.2    CH933815    KRG07534.1    CH940651    EDW65713.2    AGB95171.1    KRK06684.1    KRK06685.1    CH902621    KPU81603.1    DS235271    EEB14215.1    KQ414727    KOC62501.1    CH964239    EDW82315.2    CP012528    ALC48676.1    IAAA01061248    LAA12226.1    CM000366    EDX17398.1    JH431312    HACA01002784    CDW20145.1    GEBQ01026470    JAT13507.1    KK116084    KFM66744.1    AAZX01002900    LC379649    BBD75286.1    AAGJ04131055    AAGJ04131056    AAGJ04131057    QOIP01000010    RLU17758.1    MTYJ01000013    OQV23236.1    NCKU01004211    RWS06301.1   
Pfam
PF00595   PDZ        + More
PF07653   SH3_2
PF00625   Guanylate_kin
PF02828   L27
PF17820   PDZ_6
PF09060   L27_N
Interpro
IPR036034   PDZ_sf        + More
IPR008144   Guanylate_kin-like_dom       
IPR001452   SH3_domain       
IPR008145   GK/Ca_channel_bsu       
IPR035601   MPP5_SH3       
IPR020590   Guanylate_kinase_CS       
IPR001478   PDZ       
IPR027417   P-loop_NTPase       
IPR036028   SH3-like_dom_sf       
IPR031185   MPP5       
IPR004172   L27_dom       
IPR014775   L27_C       
IPR041489   PDZ_6       
IPR036892   L27_dom_sf       
IPR015145   L27_N       
SUPFAM
SSF50156   SSF50156        + More
SSF52540   SSF52540       
SSF50044   SSF50044       
SSF101288   SSF101288       

Ontologies

Topology

Length:
109
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.00404
Exp number, first 60 AAs:
0.0027
Total prob of N-in:
0.38756
outside
1  -  109
 
 

Population Genetic Test Statistics

Pi
338.655025
Theta
216.462907
Tajima's D
0.91227
CLR
0.619043
CSRT
0.633168341582921
Interpretation
Uncertain
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