Gene

KWMTBOMO10723

Annotation

PREDICTED:_39S_ribosomal_protein_L33?_mitochondrial_[Amyelois_transitella]

Location

Bomo_Chr18(-):1604721-1606008      View in EpiBrowser

Full name

39S ribosomal protein L33, mitochondrial      

Location in the cell

Mitochondrial   Reliability : 1.928 Nuclear   Reliability : 1.376

CDS

ATGTTTCTTACTAACGTTTTATTTAAAAAGGCGAAGAGCAAATATATAATGGTAATAATTGAGAGTGCTGTTTCTGGACACCAAAAGACGAGGATACGAGATCGTCTTGCTGATAAGATGGAGTCTATAGAGTTCGATCCATATATTCAACAAGAAAGTTTGTATAAAGAATGCAAGAAAATCCGAAGTATGAAGTCCACTTGGAAACCGACAGTCTATAAACAAATTTAA

Protein

MFLTNVLFKKAKSKYIMVIIESAVSGHQKTRIRDRLADKMESIEFDPYIQQESLYKECKKIRSMKSTWKPTVYKQI

Subunit

Component of the mitochondrial ribosome large subunit (39S) which comprises a 16S rRNA and about 50 distinct proteins.

Similarity

Belongs to the bacterial ribosomal protein bL33 family.

Keywords

Complete proteome   Mitochondrion   Reference proteome   Ribonucleoprotein   Ribosomal protein   Transit peptide  

Feature

chain  39S ribosomal protein L33, mitochondrial

Uniprot

A0A2H1VY37   A0A067RJE7   B0WMG4   A0A182H1Z4   B4R4H2   B4I0Z9   + More
B3NU21   Q9W4L1   A0A194PCG5   A0A0P4VMC0   A0A182F888   Q16W07   B4Q067   A0A1W4V1T2   B3MSI3   A0A0N1IGZ8   B4M7P9   A0A3B0JD61   A0A026WB21   B4NP87   A0A0A9ZAJ0   A0A182RXL4   A0A182VR15   A0A182PQW4   Q29GU4   B4GUZ1   A0A182N610   A0A1W4WEZ6   B4JMQ1   A0A182JP87   A0A182KM02   A0A182IGK6   Q7PYH1   B4L6Q6   A0A1I8Q9V9   A0A139WMM6   E2AFD0   A0A2A3ETV3   T1DPQ4   A0A0M9ADY1   A0A1A9ZVD7   J9JTE6   A0A336LST7   A0A1I8MU25   N6U9T4   A0A310SV46   A0A088A580   A0A0L7QXF5   R4WDA1   F4WSP5   A0A1B0ATA8   A0A158NDC7   A0A154NYT0   A0A0V0G932   A0A212FG23   A0A1D2MN44   E0W187   E9GB18   A0A164W2K9   A0A1A9X4N2   A0A195DIU9   A0A226DL03   A0A3S4QU85   B7P0U6   T1L2L0   A0A1S4EQT6   A0A2I4BCM7   A0A2P6LGK8   D3PGR4   C1BUR7   A0A1V9XBT9   A0A2K6FTJ4   A0A1D1VUG9  

Pubmed

24845553    26483478    17994087    10731132    12537572    12537569    + More
26354079    27129103    17510324    17550304    24508170    30249741    18057021    25401762    15632085    23185243    20966253    12364791    18362917    19820115    20798317    25315136    23537049    23691247    21719571    21347285    22118469    27289101    20566863    21292972    28327890    27649274   

EMBL

ODYU01005157    SOQ45745.1    KK852435    KDR23942.1    DS231997    EDS31021.1    + More
JXUM01104416    KQ564884    KXJ71620.1    CM000366    EDX17062.1    CH480819    EDW53180.1    CH954180    EDV45797.1    AE014298    AY118791    KQ459606    KPI90981.1    GDKW01000310    JAI56285.1    CH477578    EAT38758.1    CM000162    EDX01219.1    CH902622    EDV34738.1    KQ460326    KPJ15677.1    CH940653    EDW62816.1    OUUW01000003    SPP78533.1    KK107293    QOIP01000005    EZA53128.1    RLU22856.1    CH964291    CH973048    EDW86327.1    EDW87021.1    GBHO01004784    JAG38820.1    CH379064    CH673738    EAL32015.1    EDY71540.1    EDY71542.1    CH479192    EDW26528.1    EDW26530.1    CH916371    EDV91994.1    APCN01002061    AAAB01008987    CH933812    EDW06052.1    KQ971312    KYB29134.1    GL439108    EFN67823.1    KZ288191    PBC34481.1    GAMD01001735    JAA99855.1    KQ435687    KOX81353.1    ABLF02030674    UFQT01000171    SSX21092.1    APGK01043668    KB741015    KB632237    ENN75372.1    ERL90440.1    KQ759893    OAD62075.1    KQ414705    KOC63241.1    AK417359    BAN20574.1    GL888326    EGI62788.1    JXJN01003231    ADTU01012592    KQ434783    KZC04829.1    GECL01001449    JAP04675.1    AGBW02008727    OWR52677.1    LJIJ01000836    ODM94245.1    DS235866    EEB19393.1    GL732537    EFX83358.1    LRGB01001348    KZS12893.1    KQ980800    KYN12813.1    LNIX01000017    OXA45514.1    NCKU01003273    RWS07846.1    ABJB011084165    DS612897    EEC00218.1    CAEY01000948    MWRG01000084    PRD37698.1    BT120820    ADD24460.1    BT078346    ACO12770.1    MNPL01015831    OQR70896.1    BDGG01000008    GAV02229.1   

Proteomes

UP000027135    UP000002320    UP000069940    UP000249989    UP000000304    UP000001292    + More
UP000008711    UP000000803    UP000053268    UP000069272    UP000008820    UP000002282    UP000192221    UP000007801    UP000053240    UP000008792    UP000268350    UP000053097    UP000279307    UP000007798    UP000075900    UP000075920    UP000075885    UP000001819    UP000008744    UP000075884    UP000192223    UP000001070    UP000075881    UP000075882    UP000075840    UP000007062    UP000009192    UP000095300    UP000007266    UP000000311    UP000242457    UP000053105    UP000092445    UP000007819    UP000095301    UP000019118    UP000030742    UP000005203    UP000053825    UP000007755    UP000092460    UP000005205    UP000076502    UP000007151    UP000094527    UP000009046    UP000000305    UP000076858    UP000091820    UP000078492    UP000198287    UP000285301    UP000001555    UP000015104    UP000079169    UP000192220    UP000192247    UP000233160    UP000186922   

PRIDE

Q9W4L1   

Pfam

PF00471   Ribosomal_L33        + More
PF01412   ArfGap
PF00169   PH
PF12796   Ank_2

Interpro

IPR011332   Ribosomal_zn-bd        + More
IPR038584   L33_sf       
IPR001705   Ribosomal_L33       
IPR036770   Ankyrin_rpt-contain_sf       
IPR001164   ArfGAP_dom       
IPR027267   AH/BAR_dom_sf       
IPR020683   Ankyrin_rpt-contain_dom       
IPR038508   ArfGAP_dom_sf       
IPR001849   PH_domain       
IPR011993   PH-like_dom_sf       
IPR002110   Ankyrin_rpt       
IPR037278   ARFGAP/RecO       

SUPFAM

SSF57829   SSF57829        + More
SSF57863   SSF57863       
SSF48403   SSF48403       
SSF103657   SSF103657       

Gene 3D

2.20.28.120     1.20.1270.60     1.25.40.20     2.30.29.30     3.30.40.160    

CDD

cd00204  ANK

ProteinModelPortal

A0A2H1VY37   A0A067RJE7   B0WMG4   A0A182H1Z4   B4R4H2   B4I0Z9   + More
B3NU21   Q9W4L1   A0A194PCG5   A0A0P4VMC0   A0A182F888   Q16W07   B4Q067   A0A1W4V1T2   B3MSI3   A0A0N1IGZ8   B4M7P9   A0A3B0JD61   A0A026WB21   B4NP87   A0A0A9ZAJ0   A0A182RXL4   A0A182VR15   A0A182PQW4   Q29GU4   B4GUZ1   A0A182N610   A0A1W4WEZ6   B4JMQ1   A0A182JP87   A0A182KM02   A0A182IGK6   Q7PYH1   B4L6Q6   A0A1I8Q9V9   A0A139WMM6   E2AFD0   A0A2A3ETV3   T1DPQ4   A0A0M9ADY1   A0A1A9ZVD7   J9JTE6   A0A336LST7   A0A1I8MU25   N6U9T4   A0A310SV46   A0A088A580   A0A0L7QXF5   R4WDA1   F4WSP5   A0A1B0ATA8   A0A158NDC7   A0A154NYT0   A0A0V0G932   A0A212FG23   A0A1D2MN44   E0W187   E9GB18   A0A164W2K9   A0A1A9X4N2   A0A195DIU9   A0A226DL03   A0A3S4QU85   B7P0U6   T1L2L0   A0A1S4EQT6   A0A2I4BCM7   A0A2P6LGK8   D3PGR4   C1BUR7   A0A1V9XBT9   A0A2K6FTJ4   A0A1D1VUG9  

PDB

6NU3     E-value=4.72145e-05,     Score=104

KEGG

101737395    K02913 large subunit ribosomal protein L33 | (RefSeq) 39S ribosomal protein L33, mitochondrial

PATHWAY

03010    Ribosome - Bombyx mori (domestic silkworm)

GO

GO:0006412   GO:0003735   GO:0005840   GO:0032543   GO:0005739   GO:0005762   GO:0016021   GO:0046872   GO:0005096  

Subcellular location

Mitochondrion  

Length:

76

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.00352

Exp number, first 60 AAs:

0.00352

Total prob of N-in:

0.20337

outside

1  -  76

 

 

Pi

249.248919

Theta

211.832697

Tajima's D

0.576325

CLR

0.079135

CSRT

0.538823058847058

Interpretation

Uncertain