Gene
KWMTBOMO10718
Pre Gene Modal
BGIBMGA008280
Annotation
Transposon_Ty3-G_Gag-Pol_polyprotein_[Papilio_machaon]
Location in the cell
Cytoplasmic Reliability : 1.152 Nuclear Reliability : 1.494
Sequence
CDS
ATGAACATAAAATACGGAATACTTTTTGTGGCGCTCTTTGCGGCTGCCTGGGCCCTCCCCAAGCCTGAAGATGACATGTCCATCTTCTACGAGCATGTGGACCGGAACGCTCGTATTGTGGGGGGTAGCCAGGCAGCTCAGGGCAGCCACCCCCATATGGTAGCAATGACTAATGGTATCTTCATCAGGAGCTTTGTCTGCGGAGGCTCAGTGCTCACCGCACGCTCGGTGCTCACCGCTGCTCATTGCATTGTTGCTGTATTCACACTTGGAAGTCTCTCTGGAAATCTTCGTCTGACAGTCGGCACAAACCAATGGAACTCTGGAGGTTCTCTCCACACTGTCTCCAGAAACATCACCCACCCTCACTACGTGTCCAATACCATCAAGAACGACTTGGGTATTCTCATAACTTCCTCGAACATCGTTTTCAATAACCGCGTCAGGCCTATCTCTTTGAGTTTTGACTACGTACCTGGAGGCGTCCCTGTCAGGGTTGCTGGATGGGGAAGAGTTAGGGCTAACGGTGCTCTCTCCACGAATCTTCTGGAGATCAATGTGAGAACCATTGATGGTCAGACTTGCGTGAGGACTGCGGCCCAGGCGGCCATTGACCTTAACGTGAGGGCTCCTCCTGTCGAACCTCATATCGAGCTCTGCACATTCCACGCAGAAGGAACTGGTACTTGCAATGGTGACAGTGGCAGCGCATTGGCTCGGACCGACAGCGGTCTCCAAGTCGGCATCGTGTCGTGGGGCTTCCCTTGCGCACGGGGAGCTCCTGACATCTATGAAGGAGTGACTGAGCCATACTTTTGTGAAAAAGGTATCAAAACATCGGCACAAGTGTATCAAGATACCATTCTTGGGAAGGTAGTGAAGCCCCTTAACAACACCATGTTCAATAATCAAGAATGGTTCTTCCAGCAAGACTCGGCGCCAGCACTTCCGACTCCTGAGGAGACGGATTTATCCATCTTCTTCGAGCACGCCGATCCAAATGCCCGTATCGTCGGAGGGACCGAAGCTGCTCCAGGGAGCCACCCCCACATGGTTTTTCTGACCAGCGGACGAATCAGGAGTTTCATCTGTGGAGGATCGCTGGTGTCGACACGCACCGTACTCACAGCTGGACATTGTGTGGCCGGTGTATATGCGGGCGGAATTTTGCACATCAACCTCCGCGTCACCGTCGGTACGAACGAGTGGAACTCTGGCGGTACCGAATACACCGTGGCCAGAAATATAACACACCCTGACTTTAGCCTCATCTACTTGAAGAACGACATCGGTCTTCTCATAACAGACGAGGAAGTAAAATTATCGGATGCAGTCCGCCCCATCAAATTGAGCTATGATTTCGTGTCTAGTGGAGTTCCCGTTAGAGTTGCTGGATGGGGTAGAATTGGGCATCGTGAGCCGCTTTCCGAAAAGCTTTTGGTGATCGACGTGAGAACAATTGACGGTGAGGCCTGTGTCAGGGCCGCGGCCCAGGCGGCCATAGACTTCAACACGTGGGCCCCCCACGTGGACCCAGCCATTGAACTATGCACCTTCCACGCCAAAGGAACTGGTGCTTGTGGTGGTGACAGTGGTGGTGCATTGACTCGTATCGACAACGGTCTTCAAGTGGGCATGGTATCCTGGGGCTTTTCTTGTGCACGAGGTGCTCCGGATATGTTCGTCAGAATTAGCGCTTTCCGCTCCTGGTTTGATTTTGCTGTGAAATCAACGGAAGATGGAAAATCAAATGTTATATGCATAACTTCAATTGCTACACCTGATGGACAGATTTTTGGGATACCAACCGAATATCAAAATGCCAACTTTCATGAAGAAATTACAAAAACTTCAAATTATGCAAATGGTACAATTGAAGATCTTGAGAGAGACAGGAAATTAGCTTTTGAGAATACAGAGACCCTACTTAAGCCCGCGCGCCGTGACCCTAAAATCGCGAACTATAACATGGTCAGGAACGACAGGCTCTCTGCCCGTGGTGGTGGTACCGTCATTTACTATAGAAGAGCCCTGCATTGCGTCCCGCTCGATCCTCCCGCGCTCGCTAATATCGAAGCATCAGTGTGCCGAATCTCACTGACGGGACACGCGCCGATCGTTATCGCGTCCGTTTATCTTCCACCGGATAAGATCGTTCTAAGCAGTGATATCGAGGCGCTGCTCGGTATGGGGAGCTCTGTCATTCTGGCGGGCGACCTAAATTGTAAACACATCAGGTGGAACTCACACACCACAACCCCGAATGGCAGGCGGCTTGACGCGTTAGTCGATGATCTCGCCTTCGATATCGTCGCTCCGCTAACCCCGACTCACTACCCGCTAAATATCGCGCATCGCCCGGATATACTCGACATAGCGTTATTAAAAAACGTAACTCTGCGCTTACACTCGATCGAAGTAGTTTCAGAGTTAGATTCAGACCACCGTCCCGTCGTTATGAAGCTCGGTCGCGCTCCCGATTCCGTTCCCGTCACGAGGACTGTGGTGGATTGGCACACGCTGGGCATCAGCCTGGCTGAATCTGATCCACCATCGCTCCCGTTTAACCCGGACTCTATCCCGTCTCCTCAGGATACCGCTGAAGCCATAGACATCTTAACGTCACACATCACCTCGACATTAGATAGGTCATCGAAACAAGTTGTAGCGGAGGACTTCCTTCACCGCTTCAAATTGTCCGACGATATTAGGGAACTCCTTAGAGCTAAGAACGCCTCGATACGCGCCTACGACAGGTATCCTACCGCGGAAAATCGTATTCGAATGCGTGCCCTACAACGCGACGTAAAGTCTCGCATCGCCGAAGTCCGAGATGCCAGATGGTCTGATTTCTTAGAAGGACTCGCGCCCTCCCAAAGGTCTTACTACCGCTTAGCTCGTACTCTCAAATCGGATACGGTAGTAACTATGCCCCCCCTCGTAGGCCCCTCAGGCCGACTCGCGGCGTTCGATGATGACGAAAAAGCAGAACTGCTGGCCGATACATTGCAAACCCAGTGCACGCCCAGCACTCAATCCGTGGACCCTGTTCATGTAGAATTAGTAGACAGTGAGGTAGAACGCAGAGCCTCCTTGCCACCCTCTGATGCGTTACCACCCGTCACCCCGATGGAAGTTAAAGACTTGATCAAAGACCTACGTCCTCGCAAGGCTCCCGGTTCCGACGGTATATCCAACCGCGTTATTAAACTTCTACCCGTCCAACTCATCGTGATGTTGGCATCTATTTTCAATGCCGCTATGGCGAACTGTATCTTTCCCGCGGTGTGGAAAGAAGCGGACGTTATCGGCATACATAAACCCGGTAAACCAAAAAATCATCCGACGAGCTACCGCCCGATTAGCCTCCTCATGTCTCTAGGCAAACTGTATGAGCGTCTGCTCTACAAACGCCTCAGAGACTTCGTCTCATCCAAGGGCATTCTTATCGATGAACAATTCGGATTCCGTACAAATCACTCATGCGTTCAACAGGTGACACTTTACAAAACTTGCATAAGGCCCGTCATGACTTACGCGAGTGTGGTGTTCGCTCACGCGGCCCGCACACACATAGACACCCTCCAATCCCTACAATCCCGCTTTTGCAGGTTAGCTGTCGGGGCTCCGTGGTTCGTGAGGAACGTTGACCTACACGACGACCTGGGCCTCGAATCAATTCGGAAATACATGAAGTCAGCGTCGGAACGATACTTCGATAAGGCTATGCGTCATGATAATCGCCTTATCGTTGCCGCCGCTGACTACTCCCCGAATCCTGATCATGCAGGAGCCAGTCACCGTCGACGCCCTAGACACGTCCTTACGGATCCATCAGATCCAATAACCTTTGCATTAGATGCCTTCAGCTCTAATACTAGGGGCAGGCTTAGGGACCCCGAAAAGGTTAAAAGCTCAGACAAACCTAAGCTAGCATTTAACGCGAATGTGGTGCCGGAGTTTGACCCTTTATCCAAAGACCAAACTATTATAACATGGATCACCAAAGTAGAAGAATGTGCCGAGATTTATGGGTGGGAAGAAAGAGAAATTATACACTACTCTATGCCAAAATTATGCGGGGTCGCGAAAACATGGTACCAGGGTCTCACTTCGGTATTGCATACGTGGCCTGAATGGAAGAAGAAACTATTAGAATCTTTTCCGTGTAGGGAGGATTACGCTGAGCTTTTAACTGAAATGTTGGCCAAGAAAGTTAAATATGGTGAACCGCTGGAGCATTATTACTACGCGAAGATTAATTTACTAAATACGTGTAACATATCTGGTAAACAAGCCGTAGATTGTCTTCTGTATGGGGTAGAAGATCGCGCAGTAAAAGTTGGAGCTCAAGCAGCTCAATTCCGTGACCCCAAACAGGTACTTAAATATTTCAAAACTGTTAAAATAGGACAGAGCAGAGATAATCAAGATATCATACGCAGAGATACGAATCAGCGGCAACAACTAAAGGGTGTGCTGGAAAGGTATGGTGACCGTTTCTCAAATAGCTTGCATGATTTAGGGTTTACAACGATTACTGAGATGACCATAGAATTAATAGATGACGAACCTATTGTGTATCGCCCGTACCGTATGTCGTACGCCGAAAGACTGATGGATTTGGCATCTGGCTACTATCAGATCCCCATATCGGAAGAGTCTCGACCCAAGACGGCTTTCGTAACACCTGATGGTCAGTTTGAGTTTAACCGCATGCCTTTCGGTCTCGTTAATGCACCTTCAGTATTTCAAAGGACGATAAACAAAATATTGAAGGAAGCAAAAATTAAATATGCCATTGTATACATGGATGATATCCTAATCCCGTCAAAAGACTTCGAGGAAGGGTTGCTGAGATTAGAGGAAGTACTACAACTACTGAAAGAAGACTTCCTCGGATTTGAAGTCAGCGCTGGTGGTATTCGACCTGGGAGTCGAAAAAGTGAAGCAGTCTCCAAGTTTCCACGACCCACGAATCAACACGAGGTACGCCAATTTCTTGGACTGTCCGGTTTCTTTAGACGATTTATACAGGGATACGCCATCATCACTGCTCCCCTAACAGACTTATTAAAAAAGGATGCGGGATGGACCTGGAACGAGGAGCAAGAACAAGCATTCGAAAGGATAAAGGAGTTACTTACAAGCAGACCCATACTTGCTCTGTATGACCCTAAGGCGGAAATAGAACTGCATACCGACGCTTGCAAAGAAGGTCTTGCAGGTATTCTTCTTCAGCGAAACTCAAATGGAGTGATGCAGCCAGTCTCGTATTTTAGCCGGAAAACCACAAGTGACGAACGTAAGATGCATTCATATGAATTAGAAACCCTCGCGGTGATCGCATCTTTGAATCGATTCAGGGTATATCTTTTAGGTATACCATTTAAGATTTTGACTGACTGCAATGCACTTAGGTCTACGTTAGTCAAGAGAGATTTGATACCTCTTATATCACGCTGGTGGGTTCAACTACAGGAATACGACTGCACGATAGAGTACCGTCCTGGCGCACGGATGGCCCATGTAGACGCACTTAGCAGGAATACTGTAGGTAATGATGAAGGTGGAGCGCACATTTTGGATGTCTTGCCTGTAAAAGAACAAGTACAGGCACCGATTCATGACCATGATTGGATTGCGACTGTGCAAGCTGCTGATGAAGAGGTAAGGAGGATTAAACAAAGCTTAGCGGACCCGGTCGTTACGGAAGCCATAGACATACACAAAAATTATAAACTCAAAAACGATAAAGTTTATCGTATCGTAGGAGAAGAGATGAAATGGCTAGTACCTCAAGGTGTAAGGTGGCAGGTTCTAAAAATGAATCATGATGACCTTGGTCATTGGGGATTCGAAAAAACCCTTCAACGCATAAGAGATCATTATTGGTTTCCAAAAATGCGCAGATTTGTAAAAAAGTACGTCACATCATGTCTAGAATGTGCGCACCATAAAGCTCCAGGTGGAAAGCATGAAGGCGAGTTACATCCTATTGAAAAGGTAACTATACCCTTCCACACCGTTCATGTGGATCACCTCGGACCCTTCGTCAAGAGCAAGACAGGTAACTGCTACTTATTGGTAATCGTTGACGGATTCACAAAATATGTGAATATAAACCCGGTCCGGAACACGAAGTCTTTTACCTCAGTACAAGTAATGAAGAGGCATGTAAGCTATTTTGGAGTCCCAACTAGATTAATTACAGATAGGGGTACTAGCTTCACAAGTAAGACATTCCAGGACTTCATTGGATCATACGGTATAAAACATATTCAAAATGCCGTTGCTACTCCTAGGTCCAACGGACAAGTTGAACGATTCAATAGGACAATTTTAGATGCGCTGTCTACGTCTAATCACGGTAGTGACGATAGGTCCTGGGATGAACACATTTTAGACATACAAGTTGGAATCAACACTACAAAACACAAGACAACACAAAAAAGTCCCTCCGAATTACTATTCGGTTTCAACATTATCAGCAGGACCGAAGGTAAGTTGAGCGAAGTCATTATGGAAACACTTAATAGGATTCCGGTAGACGAGTTGGATGAGGTGAGACAGGAAACAGGAGAGAAAATAAAAAAACAACAAGTAAGAGACGCAGACAATTATAACAAACATAGGAAAAGACTAACCCAATATAAAGAGGGAGACCTAGTACGAGTGGCAAGGCAAATGCCTCACGATGGTAAATCACAGAAATTGGTTGTAAAATATCAAGGTCCTTATCGTGTAGTAAAAATGCTCAACAATGATAGGTTTTTAATTGAAGACACACCTCTGACTCGTAAGCACGGCCGACGATACGAAGCTATCGTAGCCATTGATAAAATACAACCGTGGATGAATTTTGAAAGAAATTTTGAATCAGACTGTTCCGATAAAAACGATTCCGAGATAGACGAGGAACGCGAAACAGAAAATTAA
Protein
MNIKYGILFVALFAAAWALPKPEDDMSIFYEHVDRNARIVGGSQAAQGSHPHMVAMTNGIFIRSFVCGGSVLTARSVLTAAHCIVAVFTLGSLSGNLRLTVGTNQWNSGGSLHTVSRNITHPHYVSNTIKNDLGILITSSNIVFNNRVRPISLSFDYVPGGVPVRVAGWGRVRANGALSTNLLEINVRTIDGQTCVRTAAQAAIDLNVRAPPVEPHIELCTFHAEGTGTCNGDSGSALARTDSGLQVGIVSWGFPCARGAPDIYEGVTEPYFCEKGIKTSAQVYQDTILGKVVKPLNNTMFNNQEWFFQQDSAPALPTPEETDLSIFFEHADPNARIVGGTEAAPGSHPHMVFLTSGRIRSFICGGSLVSTRTVLTAGHCVAGVYAGGILHINLRVTVGTNEWNSGGTEYTVARNITHPDFSLIYLKNDIGLLITDEEVKLSDAVRPIKLSYDFVSSGVPVRVAGWGRIGHREPLSEKLLVIDVRTIDGEACVRAAAQAAIDFNTWAPHVDPAIELCTFHAKGTGACGGDSGGALTRIDNGLQVGMVSWGFSCARGAPDMFVRISAFRSWFDFAVKSTEDGKSNVICITSIATPDGQIFGIPTEYQNANFHEEITKTSNYANGTIEDLERDRKLAFENTETLLKPARRDPKIANYNMVRNDRLSARGGGTVIYYRRALHCVPLDPPALANIEASVCRISLTGHAPIVIASVYLPPDKIVLSSDIEALLGMGSSVILAGDLNCKHIRWNSHTTTPNGRRLDALVDDLAFDIVAPLTPTHYPLNIAHRPDILDIALLKNVTLRLHSIEVVSELDSDHRPVVMKLGRAPDSVPVTRTVVDWHTLGISLAESDPPSLPFNPDSIPSPQDTAEAIDILTSHITSTLDRSSKQVVAEDFLHRFKLSDDIRELLRAKNASIRAYDRYPTAENRIRMRALQRDVKSRIAEVRDARWSDFLEGLAPSQRSYYRLARTLKSDTVVTMPPLVGPSGRLAAFDDDEKAELLADTLQTQCTPSTQSVDPVHVELVDSEVERRASLPPSDALPPVTPMEVKDLIKDLRPRKAPGSDGISNRVIKLLPVQLIVMLASIFNAAMANCIFPAVWKEADVIGIHKPGKPKNHPTSYRPISLLMSLGKLYERLLYKRLRDFVSSKGILIDEQFGFRTNHSCVQQVTLYKTCIRPVMTYASVVFAHAARTHIDTLQSLQSRFCRLAVGAPWFVRNVDLHDDLGLESIRKYMKSASERYFDKAMRHDNRLIVAAADYSPNPDHAGASHRRRPRHVLTDPSDPITFALDAFSSNTRGRLRDPEKVKSSDKPKLAFNANVVPEFDPLSKDQTIITWITKVEECAEIYGWEEREIIHYSMPKLCGVAKTWYQGLTSVLHTWPEWKKKLLESFPCREDYAELLTEMLAKKVKYGEPLEHYYYAKINLLNTCNISGKQAVDCLLYGVEDRAVKVGAQAAQFRDPKQVLKYFKTVKIGQSRDNQDIIRRDTNQRQQLKGVLERYGDRFSNSLHDLGFTTITEMTIELIDDEPIVYRPYRMSYAERLMDLASGYYQIPISEESRPKTAFVTPDGQFEFNRMPFGLVNAPSVFQRTINKILKEAKIKYAIVYMDDILIPSKDFEEGLLRLEEVLQLLKEDFLGFEVSAGGIRPGSRKSEAVSKFPRPTNQHEVRQFLGLSGFFRRFIQGYAIITAPLTDLLKKDAGWTWNEEQEQAFERIKELLTSRPILALYDPKAEIELHTDACKEGLAGILLQRNSNGVMQPVSYFSRKTTSDERKMHSYELETLAVIASLNRFRVYLLGIPFKILTDCNALRSTLVKRDLIPLISRWWVQLQEYDCTIEYRPGARMAHVDALSRNTVGNDEGGAHILDVLPVKEQVQAPIHDHDWIATVQAADEEVRRIKQSLADPVVTEAIDIHKNYKLKNDKVYRIVGEEMKWLVPQGVRWQVLKMNHDDLGHWGFEKTLQRIRDHYWFPKMRRFVKKYVTSCLECAHHKAPGGKHEGELHPIEKVTIPFHTVHVDHLGPFVKSKTGNCYLLVIVDGFTKYVNINPVRNTKSFTSVQVMKRHVSYFGVPTRLITDRGTSFTSKTFQDFIGSYGIKHIQNAVATPRSNGQVERFNRTILDALSTSNHGSDDRSWDEHILDIQVGINTTKHKTTQKSPSELLFGFNIISRTEGKLSEVIMETLNRIPVDELDEVRQETGEKIKKQQVRDADNYNKHRKRLTQYKEGDLVRVARQMPHDGKSQKLVVKYQGPYRVVKMLNNDRFLIEDTPLTRKHGRRYEAIVAIDKIQPWMNFERNFESDCSDKNDSEIDEERETEN
Summary
Uniprot
ProteinModelPortal
PDB
4OL8
E-value=4.77554e-46,
Score=472
Ontologies
GO
Topology
SignalP
Position: 1 - 18,
Likelihood: 0.995905
Length:
2312
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
11.9291799999999
Exp number, first 60 AAs:
7.30907
Total prob of N-in:
0.44218
outside
1 - 2312
Population Genetic Test Statistics
Pi
253.95346
Theta
168.853142
Tajima's D
1.568835
CLR
0.364647
CSRT
0.802909854507275
Interpretation
Uncertain
