SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO10713
Pre Gene Modal
BGIBMGA008276
Annotation
PREDICTED:_anaphase-promoting_complex_subunit_1_[Amyelois_transitella]
Location in the cell
Nuclear   Reliability : 1.293 PlasmaMembrane   Reliability : 1.191
 

Sequence

CDS
ATGAAACATTGTCACGCAGGTATCACGACGCGGGACATAGACAACCTGCCGCCGGCCGTGGCGCTGCTGCTGCTGAGCGTGTTCAGCCGCTGCAAGGCGGAGCCGCCGCTGGACTGGCCGGCGGAGGCCTACAACCTGGTCATGAGGGAGGACTTGGCTATCCAGGCGGAAATAGCCGAAACCATCAAAAACAACAGAGATTATTTGGAAACGCTCGCGCTAGAAGTGGCGGAGAAGGAGACGGCGTACACGCAGGCCGGCGGCGCCGCGGAGGAGCTGCCCCGGGGCGACGACGGCGACGCCAGCACGGGCATGGAGCACCTCAACACGAAGCTCTTGGGTCTGCTGTACCCCGACGACCGCAGGATGGCGGAAGTGTTGAACCTGCTGCAGTCGTCGCAGCCCGTCACCGTCAACCTCACGCAGCGTCCCGAGGTGTCCGACCACGACTTCATCGAGGAGCAGGAGAAGTACCTGTACGCCGTCAGCACCAGGACCATGGCCCTGCCAGTGGCGAGGGGCATGGCGACGCTCCGCACGTCCCCGTGGGCGTGCACGGAGCCGGCCCGCGTGGCGCGCACGTGCGTGTGGGCGCGCGGGGGGGCGCCGCACGCCGAGCTGTCCCCGCAGGCGCTGTGCTGGCCCTCCTTCCACAGCGGCGTGGCCACCGCGCTGTGCCTCGTGCCGCTCGTGCCCACCTCCATCGACACCGCCTTCGTGCTCTATAACAAGCCCAGGGGCACCGCAGAGATGTCGAGCGAACACGCCGGCTTCCTCATGGGGCTGGGCCTCAACGGGCACCTGCGGGACATGCCCTTCATGAACATCTACGAGTACCTGGTCAAGTGCAACGAGATGATCAGCATCGGCCTGCTGCTGGGCCTGGCCGCCACCTACAGGGGCACAATGGACGTCCAAGCTACCAAAATGCTCAGCATCCACCTGGAGCCGCTGCTGCCCCCCACGTCGGTGGAGCTGGACATACAGCAGAACATCCTGGTGGCGGCGCTGATGGGCGTGGGGCTGCTGTACCAGGGCACCGCGCACGCGCACTACACGCAGGTGCTGCTCAACGAGATCGGCAAGCCGCCGGGCCCGGAGGCGGAGAGCTGCGTGGAGCGCGAGGGCTACGCGCTGGCGGCCGGGCTGGCGCTGGGGCTGGTGTGCGCGGGCGCGTGGCGGGACGTGCCGCGCCGCGTGCCGCACGCGCTGCGCACCTACATGCTGGGCGGCGACCGGCCCGCCGCGCACGGTCAGTGCACCCTCCCTCTCTACTATACTCCTACTGCGACTGCGTGGAGCGCGAGGGCTACGCGCTGGCGGCCGGGCTGGCGCTGGGGCTGGTGTGCGCGGGCGCGTGGCGGGACGTGCCGCGCCGCGTGCCGCACGCGCTGCGCACCTACATGCTGGGCGGCGACCGGCCCGCCGCGCACGGTCAGTGCACCCTCCCTCTCTACTATACTCCTACTGCGACTGCGTGGAGCGCGAGGGCTACGCGCTGGCGGCCGGGCTGGCGCTGGGGCTGGTGTGCGCGGGCGCGTGGCGGGACGTGCCGCGCCGCGTGCCGCACGCGCTGCGCACCTACATGCTGGGCGGCGACCGGCCCGCCGCGCACGGTCAGTGCACCCTCCCTCTCTACTATACTCCTACTGCGACTGCGTGGAGCGCGAGGGCTACGCGCTGGCGGCCGGGCTGGCGCTGGGGCTGGTGTGCGCGGGCGCGTGGCGGGACGTGCCGCGCCGCGTGCCGCACGCGCTGCGCACCTACATGCTGGGCGGCGACCGGCCCGCCGCGCACGGTCAGTGCACCCTCCCTCTCTACTATACTCCTACTGCGACTGCGTGGAGCGCGAGGGCTACGCGCTGGCGGCCGGGCTGGCGCTGGGGCTGGTGTGCGCGGGCGCGTGGCGGGACGTGCCGCGCCGCGTGCCGCACGCGCTGCGCACCTACATGCTGGGCGGCGACCGGCCCGCCGCGCACGGTCAGTGCACCCTCCCTCTCTACTATACTCCTACTGCGACTGCGTGGAGCGCGAGGGCTACGCGCTGGCGGCCGGGCTGGCGCTGGGGCTGGTGTGCGCGGGCGCGTGGCGGGACGTGCCGCGCCGCGTGCCGCACGCGCTGCGCACCTACATGCTGGGCGGCGACCGGCCCGCCGCGCACGGTCAGTGCACCCTCCCTCTCTACTATACTCCTACTGCGACTGCGTGGAGCGCGAGGGCTACGCGCTGGCGGCCGGGCTGGCGCTGGGGCTGGTGTGCGCGGGCGCGTGGCGGGACGTGCCGCGCCGCGTGCCGCACGCGCTGCGCACCTACATGCTGGGCGGCGACCGGCCCGCCGCGCACGGTCAGTGCACCCTCCCTCTCTACTATACTCCTACTGCGACTGCGTGGAGCGCGAGGGCTACGCGCTGGCGGCCGGGCTGGCGCTGGGGCTGGTGTGCGCGGGCGCGTGGCGGGACGTGCCGCGCCGCGTGCCGCACGCGCTGCGCACCTACATGCTGGGCGGCGACCGGCCCGCCGCGCACGGTCAGTGCACCCTCCCTCTCTACTATACTCCTACTGCGACTGCGTGGAGCGCGAGGGCTACGCGCTGGCGGCCGGGCTGGCGCTGGGGCTGGTGTGCGCGGGCGCGTGGCGGGACGTGCCGCGCCGCGTGCCGCACGCGCTGCGCACCTACATGCTGGGCGGCGACCGGCCCGCCGCGCACGGTCAGTGCACCCTCCCTCTCTACTATACTCCTACTGCGACTGCGTGGAGCGCGAGGGCTACGCGCTGGCGGCCGGGCTGGCGCTGGGGCTGGTGTGCGCGGGCGCGTGGCGGGACGTGCCGCGCCGCGTGCCGCACGCGCTGCGCACCTACATGCTGGGCGGCGACCGGCCCGCCGCGCACGGTCAGTGCACCCTCCCTCTCTACTATACTCCTACTGCGACTGCGTGGAGCGCGAGGGCTACGCGCTGGCGGCCGGGCTGGCGCTGGGGCTGGTGTGCGCGGGCGCGTGGCGGGACGTGCCGCGCCGCGTGCCGCACGCGCTGCGCACCTACATGCTGGGCGGCGACCGGCCCGCCGCGCACGGTCAGTGCACCCTCCCTCTCTACTATACTCCTACTGCGACTGCGTGGAGCGCGAGGGCTACGCGCTGGCGGCCGGGCTGGCGCTGGGGCTGGTGTGCGCGGGCGCGTGGCGGGACGTGCCGCGCCGCGTGCCGCACGCGCTGCGCACCTACATGCTGGGCGGCGACCGGCCCGCCGCGCACGGTCAGTGCACCCTCCCTCTCTACTATACTCCTACTGCGACTGCGTGGAGCGCGAGGGCTACGCGCTGGCGGCCGGGCTGGCGCTGGGGCTGGTGTGCGCGGGCGCGTGGCGGGACGTGCCGCGCCGCGTGCCGCACGCGCTGCGCACCTACATGCTGGGCGGCGACCGGCCCGCCGCGCACGGTCAGTGCACCCTCCCTCTCTACTATACTCCTACTGCGACTGCGTGGAGCGCGAGGGCTACGCGCTGGCGGCCGGGCTGGCGCTGGGGCTGGTGTGCGCGGGCGCGTGGCGGGACGTGCCGCGCCGCGTGCCGCACGCGCTGCGCACCTACATGCTGGGCGGCGACCGGCCCGCCGCGCACGGTCAGTGCACCCTCCCTCTCTACTATACTCCTACTGCGACTGCGTGGAGCGCGAGGGCTACGCGCTGGCGGCCGGGCTGGCGCTGGGGCTGGTGTGCGCGGGCGCGTGGCGGGACGTGCCGCGCCGCGTGCCGCACGCGCTGCGCACCTACATGCTGGGCGGCGACCGGCCCGCCGCGCACGGTCAGTGCACCCTCCCTCTCCACTATACTCCTACTGCGACTGCGTGGAGCGCGAGGGCTACGCGCTGGCGGCCGGGCTGGCGCTGGGGCTGGTGTGCGCGGGCGCGTGGCGGGACGTGCCGCGCCGCGTGCCGCACGCGCTGCGCACCTACATGCTGGGCGGCGACCGGCCCGCCGCGCACGTGCACCCTCCCTCTCTACTATACTCCTACTGCGACTGCGTGGAGCGCGAGGGCTACGCGCTGGCGGCCGGGCTGGCGCTGGGGCTGGTGTGCGCGGGCGCGTGGCGGGACGTGCCGCGCCGCGTGCCGCACGCGCTGCGCACCTACATGCTGGGCGGCGACCGGCCCGCCGCGCACGGTCAGTGCACCCTCCCTCTCTACTATACTCCTACTGTCACTGCGGGGCGGGACCGTGTGCTGTGGGAGTGCGGGATGCTCGAGGGCATCTCGCGGATTGAGGAGGACCCAGTTTACCACGCGAACTTGGTCAGAGACGAGCGCAGCTTTTGGCACTTGCGCGAGTTTCCGCATGCATGA
Protein
MKHCHAGITTRDIDNLPPAVALLLLSVFSRCKAEPPLDWPAEAYNLVMREDLAIQAEIAETIKNNRDYLETLALEVAEKETAYTQAGGAAEELPRGDDGDASTGMEHLNTKLLGLLYPDDRRMAEVLNLLQSSQPVTVNLTQRPEVSDHDFIEEQEKYLYAVSTRTMALPVARGMATLRTSPWACTEPARVARTCVWARGGAPHAELSPQALCWPSFHSGVATALCLVPLVPTSIDTAFVLYNKPRGTAEMSSEHAGFLMGLGLNGHLRDMPFMNIYEYLVKCNEMISIGLLLGLAATYRGTMDVQATKMLSIHLEPLLPPTSVELDIQQNILVAALMGVGLLYQGTAHAHYTQVLLNEIGKPPGPEAESCVEREGYALAAGLALGLVCAGAWRDVPRRVPHALRTYMLGGDRPAAHGQCTLPLYYTPTATAWSARATRWRPGWRWGWCARARGGTCRAACRTRCAPTCWAATGPPRTVSAPSLSTILLLRLRGARGLRAGGRAGAGAGVRGRVAGRAAPRAARAAHLHAGRRPARRARSVHPPSLLYSYCDCVEREGYALAAGLALGLVCAGAWRDVPRRVPHALRTYMLGGDRPAAHGQCTLPLYYTPTATAWSARATRWRPGWRWGWCARARGGTCRAACRTRCAPTCWAATGPPRTVSAPSLSTILLLRLRGARGLRAGGRAGAGAGVRGRVAGRAAPRAARAAHLHAGRRPARRARSVHPPSLLYSYCDCVEREGYALAAGLALGLVCAGAWRDVPRRVPHALRTYMLGGDRPAAHGQCTLPLYYTPTATAWSARATRWRPGWRWGWCARARGGTCRAACRTRCAPTCWAATGPPRTVSAPSLSTILLLRLRGARGLRAGGRAGAGAGVRGRVAGRAAPRAARAAHLHAGRRPARRARSVHPPSLLYSYCDCVEREGYALAAGLALGLVCAGAWRDVPRRVPHALRTYMLGGDRPAAHGQCTLPLYYTPTATAWSARATRWRPGWRWGWCARARGGTCRAACRTRCAPTCWAATGPPRTVSAPSLSTILLLRLRGARGLRAGGRAGAGAGVRGRVAGRAAPRAARAAHLHAGRRPARRARSVHPPSLLYSYCDCVEREGYALAAGLALGLVCAGAWRDVPRRVPHALRTYMLGGDRPAAHGQCTLPLYYTPTATAWSARATRWRPGWRWGWCARARGGTCRAACRTRCAPTCWAATGPPRTVSAPSLSTILLLRLRGARGLRAGGRAGAGAGVRGRVAGRAAPRAARAAHLHAGRRPARRARSVHPPSPLYSYCDCVEREGYALAAGLALGLVCAGAWRDVPRRVPHALRTYMLGGDRPAAHVHPPSLLYSYCDCVEREGYALAAGLALGLVCAGAWRDVPRRVPHALRTYMLGGDRPAAHGQCTLPLYYTPTVTAGRDRVLWECGMLEGISRIEEDPVYHANLVRDERSFWHLREFPHA

Summary

Uniprot
ProteinModelPortal
PDB
5LCW     E-value=2.11904e-74,     Score=715

Ontologies

GO

Topology

SignalP
Position:   1 - 33,         Likelihood:  0.773076
 
 
Length:
1445
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
2.44242000000001
Exp number, first 60 AAs:
0.03949
Total prob of N-in:
0.03346
outside
1  -  1445
 
 

Population Genetic Test Statistics

Pi
246.306064
Theta
156.334244
Tajima's D
2.589475
CLR
0.624139
CSRT
0.952752362381881
Interpretation
Uncertain
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